Changeset 21759

Timestamp:

06/07/17 10:50:54 (8 years ago)

Author:

Eric.Larour

Message:

CHG: merged branch back to trunk-jpl 21754.

Location:

issm/branches/trunk-larour-NatGeoScience2016

Files:

• configs/config-ios-armv7.sh (deleted)
• configs/config-ios-armv7s.sh (deleted)
• configs/config-ios-linux.sh (deleted)
• configs/config-ios-simulator.sh (deleted)
• configs/config-pleiades-petsc3.4.sh (deleted)
• configs/config-win10.sh (deleted)
• configs/configure.sh (deleted)
• configure.ac (modified) (view diffs)
• etc/environment.csh (modified) (view diffs)
• etc/environment.sh (modified) (view diffs)
• examples/Jakobshavn/runme.m (modified) (view diffs)
• examples/Pig/runme.m (modified) (view diffs)
• jenkins/linux64_caladan (modified) (view diffs)
• jenkins/linux64_caladan_ad (modified) (view diffs)
• jenkins/linux64_caladan_ampi (modified) (view diffs)
• jenkins/linux64_ross (modified) (view diffs)
• jenkins/linux64_ross_ad (modified) (view diffs)
• jenkins/linux64_ross_ampi (modified) (view diffs)
• jenkins/linux64_ross_dakota (modified) (view diffs)
• jenkins/linux64_ross_gia (modified) (view diffs)
• jenkins/linux64_ross_iceocean (modified) (view diffs)
• jenkins/linux64_ross_python (modified) (view diffs)
• jenkins/linux64_ross_se (modified) (view diffs)
• jenkins/linux64_ross_static (modified) (view diffs)
• jenkins/linux64_ross_test (modified) (view diffs)
• jenkins/macosx_pine-island (modified) (view diffs)
• jenkins/macosx_pine-island_dakota (modified) (view diffs)
• jenkins/macosx_pine-island_dakota_static (modified) (view diffs)
• jenkins/macosx_pine-island_examples (modified) (view diffs)
• jenkins/macosx_pine-island_static (modified) (view diffs)
• jenkins/windows (modified) (view diffs)
• m4/analyses.m4 (modified) (view diffs)
• m4/issm_options.m4 (modified) (view diffs)
• packagers/macosx-dakota/package.sh (modified) (view diffs)
• packagers/macosx/package.sh (modified) (view diffs)
• src/c/Makefile.am (modified) (view diffs)
• src/c/analyses/AdjointHorizAnalysis.cpp (modified) (view diffs)
• src/c/analyses/EnthalpyAnalysis.cpp (modified) (view diffs)
• src/c/analyses/EnthalpyAnalysis.h (modified) (view diffs)
• src/c/analyses/EnumToAnalysis.cpp (modified) (view diffs)
• src/c/analyses/EsaAnalysis.cpp (added)
• src/c/analyses/EsaAnalysis.h (added)
• src/c/analyses/ExtrapolationAnalysis.cpp (modified) (view diffs)
• src/c/analyses/GiaAnalysis.cpp (deleted)
• src/c/analyses/GiaAnalysis.h (deleted)
• src/c/analyses/GiaIvinsAnalysis.cpp (added)
• src/c/analyses/GiaIvinsAnalysis.h (added)
• src/c/analyses/HydrologyDCEfficientAnalysis.cpp (modified) (view diffs)
• src/c/analyses/HydrologyDCEfficientAnalysis.h (modified) (view diffs)
• src/c/analyses/HydrologyDCInefficientAnalysis.cpp (modified) (view diffs)
• src/c/analyses/HydrologyDCInefficientAnalysis.h (modified) (view diffs)
• src/c/analyses/HydrologySommersAnalysis.cpp (modified) (view diffs)
• src/c/analyses/LevelsetAnalysis.cpp (modified) (view diffs)
• src/c/analyses/MasstransportAnalysis.cpp (modified) (view diffs)
• src/c/analyses/SealevelriseAnalysis.cpp (modified) (view diffs)
• src/c/analyses/SmbAnalysis.cpp (modified) (view diffs)
• src/c/analyses/StressbalanceAnalysis.cpp (modified) (view diffs)
• src/c/analyses/StressbalanceSIAAnalysis.cpp (modified) (view diffs)
• src/c/analyses/ThermalAnalysis.cpp (modified) (view diffs)
• src/c/analyses/analyses.h (modified) (view diffs)
• src/c/bamg/BamgMesh.cpp (modified) (view diffs)
• src/c/bamg/BamgMesh.h (modified) (view diffs)
• src/c/bamg/BamgQuadtree.cpp (modified) (view diffs)
• src/c/bamg/BamgQuadtree.h (modified) (view diffs)
• src/c/bamg/BamgVertex.cpp (modified) (view diffs)
• src/c/bamg/BamgVertex.h (modified) (view diffs)
• src/c/bamg/Direction.cpp (deleted)
• src/c/bamg/Direction.h (deleted)
• src/c/bamg/DoubleAndInt.h (deleted)
• src/c/bamg/EigenMetric.cpp (modified) (view diffs)
• src/c/bamg/Geometry.cpp (modified) (view diffs)
• src/c/bamg/Geometry.h (modified) (view diffs)
• src/c/bamg/Mesh.cpp (modified) (view diffs)
• src/c/bamg/Mesh.h (modified) (view diffs)
• src/c/bamg/Metric.cpp (modified) (view diffs)
• src/c/bamg/Metric.h (modified) (view diffs)
• src/c/bamg/Triangle.cpp (modified) (view diffs)
• src/c/bamg/Triangle.h (modified) (view diffs)
• src/c/bamg/bamgobjects.h (modified) (view diffs)
• src/c/bamg/macros.h (modified) (view diffs)
• src/c/classes/AdaptiveMeshRefinement.cpp (added)
• src/c/classes/AdaptiveMeshRefinement.h (added)
• src/c/classes/DofIndexing.cpp (modified) (view diffs)
• src/c/classes/Elements/Element.cpp (modified) (view diffs)
• src/c/classes/Elements/Element.h (modified) (view diffs)
• src/c/classes/Elements/ElementHook.cpp (modified) (view diffs)
• src/c/classes/Elements/ElementHook.h (modified) (view diffs)
• src/c/classes/Elements/Penta.cpp (modified) (view diffs)
• src/c/classes/Elements/Penta.h (modified) (view diffs)
• src/c/classes/Elements/PentaRef.cpp (modified) (view diffs)
• src/c/classes/Elements/PentaRef.h (modified) (view diffs)
• src/c/classes/Elements/Seg.h (modified) (view diffs)
• src/c/classes/Elements/Tetra.h (modified) (view diffs)
• src/c/classes/Elements/Tria.cpp (modified) (view diffs)
• src/c/classes/Elements/Tria.h (modified) (view diffs)
• src/c/classes/Elements/TriaRef.cpp (modified) (view diffs)
• src/c/classes/ExternalResults/GenericExternalResult.h (modified) (view diffs)
• src/c/classes/FemModel.cpp (modified) (view diffs)
• src/c/classes/FemModel.h (modified) (view diffs)
• src/c/classes/Inputs/BoolInput.cpp (modified) (view diffs)
• src/c/classes/Inputs/BoolInput.h (modified) (view diffs)
• src/c/classes/Inputs/ControlInput.cpp (modified) (view diffs)
• src/c/classes/Inputs/ControlInput.h (modified) (view diffs)
• src/c/classes/Inputs/DatasetInput.h (modified) (view diffs)
• src/c/classes/Inputs/DoubleArrayInput.h (modified) (view diffs)
• src/c/classes/Inputs/DoubleInput.h (modified) (view diffs)
• src/c/classes/Inputs/Input.h (modified) (view diffs)
• src/c/classes/Inputs/IntInput.cpp (modified) (view diffs)
• src/c/classes/Inputs/IntInput.h (modified) (view diffs)
• src/c/classes/Inputs/PentaInput.cpp (modified) (view diffs)
• src/c/classes/Inputs/PentaInput.h (modified) (view diffs)
• src/c/classes/Inputs/SegInput.h (modified) (view diffs)
• src/c/classes/Inputs/TetraInput.h (modified) (view diffs)
• src/c/classes/Inputs/TransientInput.h (modified) (view diffs)
• src/c/classes/Inputs/TriaInput.h (modified) (view diffs)
• src/c/classes/IoModel.cpp (modified) (view diffs)
• src/c/classes/Loads/Friction.cpp (modified) (view diffs)
• src/c/classes/Loads/Friction.h (modified) (view diffs)
• src/c/classes/Materials/Material.h (modified) (view diffs)
• src/c/classes/Materials/Matestar.cpp (modified) (view diffs)
• src/c/classes/Materials/Matestar.h (modified) (view diffs)
• src/c/classes/Materials/Matice.cpp (modified) (view diffs)
• src/c/classes/Materials/Matice.h (modified) (view diffs)
• src/c/classes/Materials/Matpar.cpp (modified) (view diffs)
• src/c/classes/Materials/Matpar.h (modified) (view diffs)
• src/c/classes/Misfit.h (modified) (view diffs)
• src/c/classes/Node.cpp (modified) (view diffs)
• src/c/classes/Node.h (modified) (view diffs)
• src/c/classes/Params/Param.h (modified) (view diffs)
• src/c/classes/Params/Parameters.cpp (modified) (view diffs)
• src/c/cores/CorePointerFromSolutionEnum.cpp (modified) (view diffs)
• src/c/cores/controlm1qn3_core.cpp (modified) (view diffs)
• src/c/cores/cores.h (modified) (view diffs)
• src/c/cores/depthaverage_core.cpp (modified) (view diffs)
• src/c/cores/esa_core.cpp (added)
• src/c/cores/gia_core.cpp (modified) (view diffs)
• src/c/cores/hydrology_core.cpp (modified) (view diffs)
• src/c/cores/levelsetfunctionslope_core.cpp (modified) (view diffs)
• src/c/cores/sealevelrise_core.cpp (modified) (view diffs)
• src/c/cores/sealevelrise_core_noneustatic.cpp (modified) (view diffs)
• src/c/cores/transient_core.cpp (modified) (view diffs)
• src/c/datastructures/DataSet.cpp (modified) (view diffs)
• src/c/main/issm_ocean.cpp (added)
• src/c/modules/Bamgx/Bamgx.cpp (modified) (view diffs)
• src/c/modules/ExpToLevelSetx/ExpToLevelSetx.cpp (modified) (view diffs)
• src/c/modules/ExpToLevelSetx/ExpToLevelSetxt.cpp (modified) (view diffs)
• src/c/modules/GetVectorFromInputsx/GetVectorFromInputsx.cpp (modified) (view diffs)
• src/c/modules/GetVectorFromInputsx/GetVectorFromInputsx.h (modified) (view diffs)
• src/c/modules/GiaDeflectionCorex (added)
• src/c/modules/GiaDeflectionCorex/GiaDeflectionCorex.cpp (added)
• src/c/modules/GiaDeflectionCorex/GiaDeflectionCorex.h (added)
• src/c/modules/GiaDeflectionCorex/distme.f (added)
• src/c/modules/GiaDeflectionCorex/freed.f (added)
• src/c/modules/GiaDeflectionCorex/ojrule.f (added)
• src/c/modules/GiaDeflectionCorex/pwise.f (added)
• src/c/modules/GiaDeflectionCorex/qwise.f (added)
• src/c/modules/GiaDeflectionCorex/stot.f (added)
• src/c/modules/GiaDeflectionCorex/what0.f (added)
• src/c/modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp (modified) (view diffs)
• src/c/modules/IoModelToConstraintsx/IoModelToConstraintsx.cpp (modified) (view diffs)
• src/c/modules/ModelProcessorx/CreateElementsVerticesAndMaterials.cpp (modified) (view diffs)
• src/c/modules/ModelProcessorx/CreateOutputDefinitions.cpp (modified) (view diffs)
• src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) (view diffs)
• src/c/modules/OutputResultsx/OutputResultsx.cpp (modified) (view diffs)
• src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.cpp (modified) (view diffs)
• src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.h (modified) (view diffs)
• src/c/shared/Elements/BuddJacka.cpp (modified) (view diffs)
• src/c/shared/Elements/ComputeD18OTemperaturePrecipitationFromPD.cpp (modified) (view diffs)
• src/c/shared/Elements/EstarComponents.cpp (modified) (view diffs)
• src/c/shared/Elements/elements.h (modified) (view diffs)
• src/c/shared/MemOps/MemOps.cpp (modified) (view diffs)
• src/c/shared/MemOps/MemOps.h (modified) (view diffs)
• src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified) (view diffs)
• src/c/solutionsequences/solutionsequence_hydro_nonlinear.cpp (modified) (view diffs)
• src/c/solutionsequences/solutionsequence_linear.cpp (modified) (view diffs)
• src/c/solutionsequences/solutionsequence_nonlinear.cpp (modified) (view diffs)
• src/c/toolkits/gsl/DenseGslSolve.cpp (modified) (view diffs)
• src/c/toolkits/issm/IssmMpiSparseMat.h (modified) (view diffs)
• src/c/toolkits/issm/IssmMpiVec.h (modified) (view diffs)
• src/c/toolkits/mumps/MumpsSolve.cpp (modified) (view diffs)
• src/m/Makefile.am (modified) (view diffs)
• src/m/archive/arch.py (modified) (view diffs)
• src/m/boundaryconditions/PattynSMB.py (modified) (view diffs)
• src/m/boundaryconditions/SetIceSheetBC.py (modified) (view diffs)
• src/m/boundaryconditions/SetIceShelfBC.py (modified) (view diffs)
• src/m/boundaryconditions/SetMarineIceSheetBC.py (modified) (view diffs)
• src/m/boundaryconditions/love_numbers.m (modified) (view diffs)
• src/m/boundaryconditions/love_numbers.py (modified) (view diffs)
• src/m/classes/SMBcomponents.py (modified) (view diffs)
• src/m/classes/SMBd18opdd.m (modified) (view diffs)
• src/m/classes/SMBd18opdd.py (modified) (view diffs)
• src/m/classes/SMBforcing.m (modified) (view diffs)
• src/m/classes/SMBforcing.py (modified) (view diffs)
• src/m/classes/SMBgradientsela.m (added)
• src/m/classes/SMBgradientsela.py (added)
• src/m/classes/SMBmeltcomponents.py (modified) (view diffs)
• src/m/classes/SMBpdd.py (modified) (view diffs)
• src/m/classes/adinversion.py (modified) (view diffs)
• src/m/classes/amr.js (added)
• src/m/classes/amr.m (added)
• src/m/classes/amr.py (added)
• src/m/classes/autodiff.py (modified) (view diffs)
• src/m/classes/bamggeom.py (modified) (view diffs)
• src/m/classes/bamgmesh.m (modified) (view diffs)
• src/m/classes/bamgmesh.py (modified) (view diffs)
• src/m/classes/basalforcings.py (modified) (view diffs)
• src/m/classes/calvingdev.m (modified) (view diffs)
• src/m/classes/calvinglevermann.m (modified) (view diffs)
• src/m/classes/calvingminthickness.m (modified) (view diffs)
• src/m/classes/clusters/acenet.m (modified) (view diffs)
• src/m/classes/clusters/camhpc.m (added)
• src/m/classes/clusters/castor.m (modified) (view diffs)
• src/m/classes/clusters/cloud.m (modified) (view diffs)
• src/m/classes/clusters/cosmos.m (modified) (view diffs)
• src/m/classes/clusters/cyclone.py (modified) (view diffs)
• src/m/classes/clusters/discover.m (modified) (view diffs)
• src/m/classes/clusters/gemini.m (modified) (view diffs)
• src/m/classes/clusters/generic.js (modified) (view diffs)
• src/m/classes/clusters/generic.m (modified) (view diffs)
• src/m/classes/clusters/generic.py (modified) (view diffs)
• src/m/classes/clusters/generic_static.m (modified) (view diffs)
• src/m/classes/clusters/greenplanet.m (modified) (view diffs)
• src/m/classes/clusters/hexagon.py (modified) (view diffs)
• src/m/classes/clusters/hpc.m (modified) (view diffs)
• src/m/classes/clusters/lonestar.m (modified) (view diffs)
• src/m/classes/clusters/pfe.m (modified) (view diffs)
• src/m/classes/clusters/pfe.py (modified) (view diffs)
• src/m/classes/clusters/pollux.m (modified) (view diffs)
• src/m/classes/clusters/raijin.m (modified) (view diffs)
• src/m/classes/clusters/vilje.m (modified) (view diffs)
• src/m/classes/clusters/vilje.py (modified) (view diffs)
• src/m/classes/clusters/yellowstone.m (added)
• src/m/classes/dependent.py (modified) (view diffs)
• src/m/classes/esa.js (added)
• src/m/classes/esa.m (added)
• src/m/classes/esa.py (added)
• src/m/classes/flowequation.py (modified) (view diffs)
• src/m/classes/friction.m (modified) (view diffs)
• src/m/classes/friction.py (modified) (view diffs)
• src/m/classes/frictioncoulomb.py (modified) (view diffs)
• src/m/classes/frictionhydro.m (modified) (view diffs)
• src/m/classes/frictionhydro.py (added)
• src/m/classes/frictionjosh.m (added)
• src/m/classes/gia.js (deleted)
• src/m/classes/gia.m (deleted)
• src/m/classes/gia.py (deleted)
• src/m/classes/giacaron.m (added)
• src/m/classes/giaivins.js (added)
• src/m/classes/giaivins.m (added)
• src/m/classes/giaivins.py (added)
• src/m/classes/groundingline.py (modified) (view diffs)
• src/m/classes/hydrologydc.m (modified) (view diffs)
• src/m/classes/hydrologydc.py (modified) (view diffs)
• src/m/classes/hydrologysommers.m (modified) (view diffs)
• src/m/classes/independent.py (modified) (view diffs)
• src/m/classes/initialization.m (modified) (view diffs)
• src/m/classes/initialization.py (modified) (view diffs)
• src/m/classes/inversion.py (modified) (view diffs)
• src/m/classes/levelset.m (modified) (view diffs)
• src/m/classes/levelset.py (modified) (view diffs)
• src/m/classes/linearbasalforcings.m (modified) (view diffs)
• src/m/classes/linearbasalforcings.py (modified) (view diffs)
• src/m/classes/m1qn3inversion.py (modified) (view diffs)
• src/m/classes/mask.py (modified) (view diffs)
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• src/m/classes/matdamageice.py (modified) (view diffs)
• src/m/classes/matenhancedice.m (added)
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• src/m/classes/matice.js (modified) (view diffs)
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• src/m/classes/matice.py (modified) (view diffs)
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• src/m/classes/oldclasses/gia.m (added)
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• src/m/classes/trans.js (modified) (view diffs)
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• src/m/classes/transient.py (modified) (view diffs)
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• src/m/contrib/defleurian/paraview/enveloppeVTK.py (modified) (view diffs)
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• src/m/contrib/morlighem/bamg/YamsCall.py (modified) (view diffs)
• src/m/contrib/tsantos (added)
• src/m/contrib/tsantos/AMRexportVTK.m (added)
• src/m/contrib/tsantos/mismip (added)
• src/m/contrib/tsantos/mismip/MismipGLPosition.m (added)
• src/m/contrib/tsantos/mismip/generate_plot.m (added)
• src/m/contrib/tsantos/mismip/gl_position.m (added)
• src/m/contrib/tsantos/mismip/ice_evolution.m (added)
• src/m/contrib/tsantos/mismip/writeNetCDF.m (added)
• src/m/contrib/tsantos/remesh.m (added)
• src/m/coordsystems/gmtmask.py (modified) (view diffs)
• src/m/coordsystems/ll2xy.py (modified) (view diffs)
• src/m/coordsystems/xy2ll.py (modified) (view diffs)
• src/m/dev/issmversion.m (modified) (view diffs)
• src/m/dev/issmversion.py (modified) (view diffs)
• src/m/exp/exp2shp.m (modified) (view diffs)
• src/m/exp/expcoarsen.m (modified) (view diffs)
• src/m/exp/expcoarsen.py (modified) (view diffs)
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• src/m/extrusion/DepthAverage.py (modified) (view diffs)
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• src/m/extrusion/project3d.py (modified) (view diffs)
• src/m/geometry/FlagElements.py (modified) (view diffs)
• src/m/geometry/GetAreas.py (modified) (view diffs)
• src/m/geometry/SegIntersect.py (modified) (view diffs)
• src/m/geometry/slope.py (modified) (view diffs)
• src/m/interp/SectionValues.py (modified) (view diffs)
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