PetscSolver.cpp File Reference

#include "./PetscSolver.h"
#include "../../../shared/Numerics/Verbosity.h"
#include "../../../shared/MemOps/MemOps.h"
#include "../../../shared/Exceptions/exceptions.h"
#include "../../../shared/io/Comm/IssmComm.h"
#include "../../../shared/Enum/Enum.h"
#include "../../../shared/io/Print/Print.h"

Go to the source code of this file.

Functions
void	PetscSolve (PetscVec **puf, PetscMat *Kff, PetscVec *pf, PetscVec *uf0, PetscVec *df, Parameters *parameters)
void	SolverxPetsc (Vec *puf, Mat Kff, Vec pf, Vec uf0, Vec df, Parameters *parameters)
void	DofTypesToIndexSet (IS *pisv, IS *pisp, Vec df, int typeenum)

Function Documentation

PetscSolve()

void PetscSolve	(	PetscVec **	puf,
		PetscMat *	Kff,
		PetscVec *	pf,
		PetscVec *	uf0,
		PetscVec *	df,
		Parameters *	parameters
	)

Definition at line 19 of file PetscSolver.cpp.

                                                                                                                 { /*{{{*/
 
   PetscVec* uf=new PetscVec();
 
   Vec uf0_vector = NULL;
   Vec df_vector  = NULL;
 
   if(uf0) uf0_vector = uf0->vector;
   if(df)  df_vector  = df->vector;
 
   SolverxPetsc(&uf->vector, Kff->matrix, pf->vector, uf0_vector, df_vector, parameters);
 
   *puf=uf;
 
}

SolverxPetsc()

void SolverxPetsc	(	Vec *	puf,
		Mat	Kff,
		Vec	pf,
		Vec	uf0,
		Vec	df,
		Parameters *	parameters
	)

Definition at line 35 of file PetscSolver.cpp.

                                                                                     { /*{{{*/
 
   /*Output: */
   Vec        uf               = NULL;
 
   /*Intermediary: */
   int        local_m,local_n,global_m,global_n;
 
   /*Solver */
   KSP        ksp              = NULL;
   PC         pc               = NULL;
   int        iteration_number;
   int        solver_type;
   bool       fromlocalsize    = true;
   #if _PETSC_MAJOR_ < 3 || (_PETSC_MAJOR_ == 3 && _PETSC_MINOR_ < 2)
   PetscTruth flag,flg;
   #else
   PetscBool flag,flg;
   #endif
 
   /*FS: */
   IS         isv=NULL;
   IS         isp=NULL;
   char ksp_type[50];
 
   /*Display message*/
   #if _PETSC_MAJOR_ < 3 || (_PETSC_MAJOR_ == 3 && _PETSC_MINOR_ < 2)
   if(VerboseSolver())PetscOptionsPrint(stdout);
   #else
      #if _PETSC_MINOR_<7
      if(VerboseSolver())PetscOptionsView(PETSC_VIEWER_STDOUT_WORLD);
      #else
      if(VerboseSolver())PetscOptionsView(NULL,PETSC_VIEWER_STDOUT_WORLD);
      #endif
   #endif
 
   /*First, check that f-set is not NULL, i.e. model is fully constrained:*/ 
   _assert_(Kff);
   MatGetSize(Kff,&global_m,&global_n); _assert_(global_m==global_n);
   if(!global_n){
      *puf=NewVec(0,IssmComm::GetComm()); return;
   }
 
   /*Initial guess */
   /*Now, check that we are not giving an initial guess to the solver, if we are running a direct solver: */
   #if _PETSC_MINOR_<7
   PetscOptionsGetString(PETSC_NULL,"-ksp_type",ksp_type,49,&flg);
   #else
   PetscOptionsGetString(NULL,PETSC_NULL,"-ksp_type",ksp_type,49,&flg);
   #endif
   if (strcmp(ksp_type,"preonly")==0)uf0=NULL;
 
   /*If initial guess for the solution exists, use it to create uf, otherwise, 
    * duplicate the right hand side so that the solution vector has the same structure*/
   if(uf0){
      VecDuplicate(uf0,&uf); VecCopy(uf0,uf);
   }
   else{
      MatGetLocalSize(Kff,&local_m,&local_n);uf=NewVec(local_n,IssmComm::GetComm(),fromlocalsize);
   }
 
   /*Process petsc options to see if we are using special types of external solvers*/
   PetscOptionsDetermineSolverType(&solver_type);
 
   /*Check the solver is available*/
   if(solver_type==MUMPSPACKAGE_LU || solver_type==MUMPSPACKAGE_CHOL){
      #ifndef _HAVE_MUMPS_
      _error_("requested MUMPS solver, which was not compiled into ISSM!\n");
      #endif
   }
 
   /*Prepare solver*/
   KSPCreate(IssmComm::GetComm(),&ksp);
   #if (_PETSC_MAJOR_==3) && (_PETSC_MINOR_>=5)
      KSPSetOperators(ksp,Kff,Kff);
   #else
      KSPSetOperators(ksp,Kff,Kff,DIFFERENT_NONZERO_PATTERN);
   #endif
   KSPSetFromOptions(ksp);
 
   /*Specific solver?: */
   KSPGetPC(ksp,&pc);
   if (solver_type==MUMPSPACKAGE_LU){
      #if (_PETSC_MAJOR_==3) && (_PETSC_MINOR_>=9)
      PCFactorSetMatSolverType(pc,MATSOLVERMUMPS);
      #else
      PCFactorSetMatSolverPackage(pc,MATSOLVERMUMPS);
      #endif
   }
 
   /*FS: */
   if (solver_type==FSSolverEnum){
      /*Make indices out of doftypes: */
      if(!df)_error_("need doftypes for FS solver!\n");
      DofTypesToIndexSet(&isv,&isp,df,FSSolverEnum);
 
      /*Set field splits: */
      KSPGetPC(ksp,&pc);
      #if _PETSC_MINOR_==1
      PCFieldSplitSetIS(pc,isv);
      PCFieldSplitSetIS(pc,isp);
      #else
      PCFieldSplitSetIS(pc,PETSC_NULL,isv);
      PCFieldSplitSetIS(pc,PETSC_NULL,isp);
      #endif
 
   }
 
   /*If there is an initial guess for the solution, use it
    * except if we are using the MUMPS direct solver
    * where any initial guess will crash Petsc*/
   if (uf0){
      if((solver_type!=MUMPSPACKAGE_LU) && (solver_type!=MUMPSPACKAGE_CHOL) && (solver_type!=SPOOLESPACKAGE_LU) && (solver_type!=SPOOLESPACKAGE_CHOL) && (solver_type!=SUPERLUDISTPACKAGE)){
         KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);
      }
   }
 
   /*Solve: */
   if(VerboseSolver())KSPView(ksp,PETSC_VIEWER_STDOUT_WORLD);
   KSPSolve(ksp,pf,uf);
 
   /*Check convergence*/
   KSPGetIterationNumber(ksp,&iteration_number);
   if (iteration_number<0) _error_("Solver diverged at iteration number: " << -iteration_number);
   if (VerboseSolver())  _printf0_("Petsc: "<< iteration_number << " KSP iterations\n"); 
 
   /*Free resources:*/
   KSPFree(&ksp);
 
   /*Assign output pointers:*/
   *puf=uf;
} 

DofTypesToIndexSet()

void DofTypesToIndexSet	(	IS *	pisv,
		IS *	pisp,
		Vec	df,
		int	typeenum
	)

Definition at line 168 of file PetscSolver.cpp.

                                                                { /*{{{*/
 
   /*output: */
   IS          isv=NULL;
   IS          isp=NULL;
 
   int         start,end;
   IssmDouble*     df_local=NULL;
   int         df_local_size;
 
   int*     pressure_indices=NULL;
   int*     velocity_indices=NULL;
   int      pressure_num=0;
   int      velocity_num=0;
   int      pressure_count=0;
   int      velocity_count=0;
 
   if(typeenum==FSSolverEnum){
 
      /*Ok, recover doftypes vector values and indices: */
      VecGetOwnershipRange(df,&start,&end);
      VecGetLocalSize(df,&df_local_size);
      VecGetArray(df,&df_local);
 
      pressure_num=0;
      velocity_num=0;
      for(int i=0;i<df_local_size;i++){
         if (df_local[i]==PressureEnum)pressure_num++;
         else velocity_num++;
      }
 
      /*Allocate indices: */
      if(pressure_num)pressure_indices=xNew<int>(pressure_num);
      if(velocity_num)velocity_indices=xNew<int>(velocity_num);
 
      pressure_count=0;
      velocity_count=0;
      for(int i=0;i<df_local_size;i++){
         if (df_local[i]==PressureEnum){
            pressure_indices[pressure_count]=start+i;
            pressure_count++;
         }
         if (df_local[i]==VelocityEnum){
            velocity_indices[velocity_count]=start+i;
            velocity_count++;
         }
      }
      VecRestoreArray(df,&df_local);
 
      /*Create indices sets: */
      #if _PETSC_MAJOR_ < 3 || (_PETSC_MAJOR_ == 3 && _PETSC_MINOR_ < 2)
      ISCreateGeneral(IssmComm::GetComm(),pressure_num,pressure_indices,&isp);
      ISCreateGeneral(IssmComm::GetComm(),velocity_num,velocity_indices,&isv);
      #else
      ISCreateGeneral(IssmComm::GetComm(),pressure_num,pressure_indices,PETSC_COPY_VALUES,&isp);
      ISCreateGeneral(IssmComm::GetComm(),velocity_num,velocity_indices,PETSC_COPY_VALUES,&isv);
      #endif
   }
 
   /*Free ressources:*/
   xDelete<int>(pressure_indices);
   xDelete<int>(velocity_indices);
 
   /*Assign output pointers:*/
   *pisv=isv;
   *pisp=isp;
}