AmrBamg.h

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#ifndef AMRBAMG
#define AMRBAMG
 
/*Includes*/
#include "../shared/shared.h"
#include "../toolkits/toolkits.h"
 
#include "../bamg/BamgMesh.h"
#include "../bamg/BamgGeom.h"
#include "../bamg/BamgOpts.h"
 
class AmrBamg{
 
   public:
      int fieldenum;
      int keepmetric;
      IssmDouble groundingline_resolution;
      IssmDouble groundingline_distance;
      IssmDouble icefront_resolution;
      IssmDouble icefront_distance;
      IssmDouble thicknesserror_resolution;
      IssmDouble thicknesserror_threshold;
      IssmDouble thicknesserror_groupthreshold;
      IssmDouble thicknesserror_maximum;
      IssmDouble deviatoricerror_resolution;
      IssmDouble deviatoricerror_threshold;
      IssmDouble deviatoricerror_groupthreshold;
      IssmDouble deviatoricerror_maximum;
 
 
      /* Constructor, destructor etc*/
      AmrBamg();
      
      ~AmrBamg();
 
      /*General methods*/
      void Initialize();
      void SetMesh(int** elementslist_in,IssmDouble** x_in,IssmDouble** y_in,int* numberofvertices,int* numberofelements);
      void GetMesh(int** elementslist_out,IssmDouble** x_out,IssmDouble** y_out,int* numberofvertices,int* numberofelements);
      void ExecuteRefinementBamg(IssmDouble* field,IssmDouble* hmaxVertices,int** pdatalist,IssmDouble** pxylist,int** pelementslist);
      void SetBamgOpts(IssmDouble hmin_in,IssmDouble hmax_in,IssmDouble err_in,IssmDouble gradation_in);
      
      /*Access Method*/
      BamgOpts* GetBamgOpts(){return this->options;}
      
   private:
      BamgGeom* geometry;
      BamgMesh* fathermesh;
      BamgMesh* previousmesh;
      BamgOpts* options;
      /*entire mesh*/
      IssmDouble* x;
      IssmDouble* y;
      int* elementslist;
      int numberofvertices;
      int numberofelements;
};
 
#endif