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Changeset 3913

Timestamp:

05/23/10 00:19:16 (15 years ago)

Author:

Eric.Larour

Message:

Moved all objects in Bamg to objects directory.
Moved all solutions from parallel to solutoins.
Moved all modules from top c/ directory to c/modules directory
cleaned up all object dependencies in Bamg/objects (fiouh!)
That will do for the week-end:)

Location:

issm/trunk/src

Files:

: 58 added
: 251 edited

c/Makefile.am (modified) (7 diffs)
c/include/macros.h (modified) (2 diffs)
c/modules/AverageFilterx/AverageFilterx.cpp (modified) (1 diff)
c/modules/BamgConvertMeshx/BamgConvertMeshx.cpp (modified) (1 diff)
c/modules/BamgConvertMeshx/BamgConvertMeshx.h (modified) (1 diff)
c/modules/BuildNodeSetsx/BuildNodeSetsx.cpp (modified) (1 diff)
c/modules/BuildNodeSetsx/BuildNodeSetsx.h (modified) (1 diff)
c/modules/BuildNodeSetsx/PartitionSets.cpp (modified) (1 diff)
c/modules/ComputeBasalStressx/ComputeBasalStressx.cpp (modified) (1 diff)
c/modules/ComputeBasalStressx/ComputeBasalStressx.h (modified) (1 diff)
c/modules/ComputePressurex/ComputePressurex.cpp (modified) (1 diff)
c/modules/ComputePressurex/ComputePressurex.h (modified) (1 diff)
c/modules/ComputeStrainRatex/ComputeStrainRatex.cpp (modified) (1 diff)
c/modules/ComputeStrainRatex/ComputeStrainRatex.h (modified) (1 diff)
c/modules/ConfigureObjectsx/ConfigureObjectsx.cpp (modified) (1 diff)
c/modules/ConfigureObjectsx/ConfigureObjectsx.h (modified) (1 diff)
c/modules/ContourToMeshx/ContourToMeshx.h (modified) (1 diff)
c/modules/ContourToNodesx/ContourToNodesx.h (modified) (1 diff)
c/modules/ControlConstrainx/ControlConstrainx.cpp (modified) (1 diff)
c/modules/ControlConstrainx/ControlConstrainx.h (modified) (1 diff)
c/modules/CostFunctionx/CostFunctionx.cpp (modified) (1 diff)
c/modules/CostFunctionx/CostFunctionx.h (modified) (1 diff)
c/modules/DepthAverageInputx/DepthAverageInputx.cpp (modified) (1 diff)
c/modules/DepthAverageInputx/DepthAverageInputx.h (modified) (1 diff)
c/modules/Dofx/Dofx.cpp (modified) (1 diff)
c/modules/Dofx/Dofx.h (modified) (1 diff)
c/modules/Dux/Dux.cpp (modified) (1 diff)
c/modules/Dux/Dux.h (modified) (1 diff)
c/modules/ElementConnectivityx/ElementConnectivityx.cpp (modified) (1 diff)
c/modules/ExtrudeInputx/ExtrudeInputx.cpp (modified) (1 diff)
c/modules/ExtrudeInputx/ExtrudeInputx.h (modified) (1 diff)
c/modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.cpp (modified) (1 diff)
c/modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.h (modified) (1 diff)
c/modules/FieldDepthAveragex/FieldDepthAveragex.cpp (modified) (1 diff)
c/modules/FieldDepthAveragex/FieldDepthAveragex.h (modified) (1 diff)
c/modules/FieldExtrudex/FieldExtrudex.cpp (modified) (1 diff)
c/modules/FieldExtrudex/FieldExtrudex.h (modified) (1 diff)
c/modules/GetSolutionFromInputsx/GetSolutionFromInputsx.cpp (modified) (1 diff)
c/modules/GetSolutionFromInputsx/GetSolutionFromInputsx.h (modified) (1 diff)
c/modules/Gradjx/Gradjx.cpp (modified) (1 diff)
c/modules/Gradjx/Gradjx.h (modified) (1 diff)
c/modules/HoleFillerx/HoleFillerx.cpp (modified) (1 diff)
c/modules/InputToResultx/InputToResultx.cpp (modified) (1 diff)
c/modules/InputToResultx/InputToResultx.h (modified) (1 diff)
c/modules/InterpFromGridToMeshx/InterpFromGridToMeshx.cpp (modified) (1 diff)
c/modules/InterpFromGridToMeshx/InterpFromGridToMeshx.h (modified) (1 diff)
c/modules/InterpFromGridToMeshx/InterpFromGridToMeshxt.cpp (modified) (1 diff)
c/modules/InterpFromMeshToGridx/InterpFromMeshToGridx.cpp (modified) (1 diff)
c/modules/InterpFromMeshToGridx/InterpFromMeshToGridx.h (modified) (1 diff)
c/modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp (modified) (1 diff)
c/modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.h (modified) (1 diff)
c/modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.cpp (modified) (1 diff)
c/modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.h (modified) (1 diff)
c/modules/MassFluxx/MassFluxx.cpp (modified) (1 diff)
c/modules/MassFluxx/MassFluxx.h (modified) (1 diff)
c/modules/Mergesolutionfromftogx/Mergesolutionfromftogx.h (modified) (1 diff)
c/modules/MeshPartitionx/MeshPartitionx.cpp (modified) (1 diff)
c/modules/Misfitx/Misfitx.cpp (modified) (1 diff)
c/modules/Misfitx/Misfitx.h (modified) (1 diff)
c/modules/ModelProcessorx/Balancedthickness/CreateConstraintsBalancedthickness.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedthickness/CreateElementsNodesAndMaterialsBalancedthickness.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedthickness/CreateLoadsBalancedthickness.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedthickness2/CreateConstraintsBalancedthickness2.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedthickness2/CreateElementsNodesAndMaterialsBalancedthickness2.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedthickness2/CreateLoadsBalancedthickness2.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedvelocities/CreateConstraintsBalancedvelocities.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedvelocities/CreateElementsNodesAndMaterialsBalancedvelocities.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Balancedvelocities/CreateLoadsBalancedvelocities.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Control/CreateParametersControl.cpp (modified) (1 diff)
c/modules/ModelProcessorx/CreateDataSets.cpp (modified) (1 diff)
c/modules/ModelProcessorx/CreateParameters.cpp (modified) (1 diff)
c/modules/ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticHoriz/CreateConstraintsDiagnosticHoriz.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticHoriz/CreateElementsNodesAndMaterialsDiagnosticHoriz.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticHoriz/CreateLoadsDiagnosticHoriz.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticHutter/CreateConstraintsDiagnosticHutter.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticHutter/CreateElementsNodesAndMaterialsDiagnosticHutter.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticHutter/CreateLoadsDiagnosticHutter.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticStokes/CreateConstraintsDiagnosticStokes.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticStokes/CreateElementsNodesAndMaterialsDiagnosticStokes.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticStokes/CreateLoadsDiagnosticStokes.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticVert/CreateConstraintsDiagnosticVert.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticVert/CreateElementsNodesAndMaterialsDiagnosticVert.cpp (modified) (1 diff)
c/modules/ModelProcessorx/DiagnosticVert/CreateLoadsDiagnosticVert.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Melting/CreateConstraintsMelting.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Melting/CreateElementsNodesAndMaterialsMelting.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Melting/CreateLoadsMelting.cpp (modified) (1 diff)
c/modules/ModelProcessorx/ModelProcessorx.h (modified) (1 diff)
c/modules/ModelProcessorx/Partitioning.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Prognostic/CreateConstraintsPrognostic.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Prognostic/CreateElementsNodesAndMaterialsPrognostic.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Prognostic/CreateLoadsPrognostic.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Prognostic2/CreateConstraintsPrognostic2.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Prognostic2/CreateElementsNodesAndMaterialsPrognostic2.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Prognostic2/CreateLoadsPrognostic2.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Prognostic2/CreateParametersPrognostic2.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Qmu/CreateParametersQmu.cpp (modified) (1 diff)
c/modules/ModelProcessorx/SlopeCompute/CreateConstraintsSlopeCompute.cpp (modified) (1 diff)
c/modules/ModelProcessorx/SlopeCompute/CreateElementsNodesAndMaterialsSlopeCompute.cpp (modified) (1 diff)
c/modules/ModelProcessorx/SlopeCompute/CreateLoadsSlopeCompute.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Thermal/CreateConstraintsThermal.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Thermal/CreateElementsNodesAndMaterialsThermal.cpp (modified) (1 diff)
c/modules/ModelProcessorx/Thermal/CreateLoadsThermal.cpp (modified) (1 diff)
c/modules/MpcNodesx/MpcNodesx.cpp (modified) (1 diff)
c/modules/MpcNodesx/MpcNodesx.h (modified) (1 diff)
c/modules/NodeConnectivityx/NodeConnectivityx.cpp (modified) (1 diff)
c/modules/NormalizeConstraintsx/NormalizeConstraintsx.cpp (modified) (1 diff)
c/modules/NormalizeConstraintsx/NormalizeConstraintsx.h (modified) (1 diff)
c/modules/Orthx/Orthx.h (modified) (1 diff)
c/modules/OutputRiftsx/OutputRiftsx.cpp (modified) (1 diff)
c/modules/OutputRiftsx/OutputRiftsx.h (modified) (1 diff)
c/modules/PenaltyConstraintsx/PenaltyConstraintsx.cpp (modified) (1 diff)
c/modules/PenaltyConstraintsx/PenaltyConstraintsx.h (modified) (1 diff)
c/modules/PenaltyConstraintsx/RiftConstraints.cpp (modified) (1 diff)
c/modules/PenaltyConstraintsx/RiftConstraints.h (modified) (1 diff)
c/modules/PenaltySystemMatricesx/PenaltySystemMatricesx.cpp (modified) (1 diff)
c/modules/PenaltySystemMatricesx/PenaltySystemMatricesx.h (modified) (1 diff)
c/modules/ProcessParamsx/ProcessParamsx.cpp (modified) (1 diff)
c/modules/ProcessParamsx/ProcessParamsx.h (modified) (1 diff)
c/modules/PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.cpp (modified) (1 diff)
c/modules/PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.h (modified) (1 diff)
c/modules/Qmux/DakotaResponses.cpp (modified) (1 diff)
c/modules/Qmux/Qmux.cpp (modified) (1 diff)
c/modules/Qmux/Qmux.h (modified) (1 diff)
c/modules/Qmux/SpawnCore.cpp (modified) (1 diff)
c/modules/Qmux/SpawnCoreParallel.cpp (modified) (1 diff)
c/modules/Qmux/SpawnCoreSerial.cpp (modified) (1 diff)
c/modules/Reduceloadfromgtofx/Reduceloadfromgtofx.h (modified) (1 diff)
c/modules/Reducematrixfromgtofx/Reducematrixfromgtofx.h (modified) (1 diff)
c/modules/Reducematrixfromgtofx/Reducematrixfromgton.cpp (modified) (1 diff)
c/modules/Reducevectorgtofx/Reducevectorgtofx.h (modified) (1 diff)
c/modules/Reducevectorgtosx/Reducevectorgtosx.h (modified) (1 diff)
c/modules/Solverx/Solverx.cpp (modified) (1 diff)
c/modules/Solverx/Solverx.h (modified) (1 diff)
c/modules/SpcNodesx/SpcNodesx.cpp (modified) (1 diff)
c/modules/SpcNodesx/SpcNodesx.h (modified) (1 diff)
c/modules/SplitSolutionVectorx/SplitSolutionVectorx.cpp (modified) (1 diff)
c/modules/SplitSolutionVectorx/SplitSolutionVectorx.h (modified) (1 diff)
c/modules/SurfaceAreax/SurfaceAreax.cpp (modified) (1 diff)
c/modules/SurfaceAreax/SurfaceAreax.h (modified) (1 diff)
c/modules/SystemMatricesx/SystemMatricesx.cpp (modified) (1 diff)
c/modules/SystemMatricesx/SystemMatricesx.h (modified) (1 diff)
c/modules/UpdateGeometryx/UpdateGeometryx.cpp (modified) (1 diff)
c/modules/UpdateGeometryx/UpdateGeometryx.h (modified) (1 diff)
c/modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.cpp (modified) (1 diff)
c/modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.h (modified) (1 diff)
c/modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.cpp (modified) (1 diff)
c/modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.h (modified) (1 diff)
c/modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.cpp (modified) (1 diff)
c/modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.h (modified) (1 diff)
c/modules/UpdateVertexPositionsx/UpdateVertexPositionsx.cpp (modified) (1 diff)
c/modules/UpdateVertexPositionsx/UpdateVertexPositionsx.h (modified) (1 diff)
c/objects/Bamg/CrackedEdge.cpp (added)
c/objects/Bamg/CrackedEdge.h (added)
c/objects/Bamg/Curve.cpp (added)
c/objects/Bamg/Curve.h (added)
c/objects/Bamg/Direction.cpp (added)
c/objects/Bamg/Direction.h (added)
c/objects/Bamg/DoubleAndInt.h (added)
c/objects/Bamg/Edge.cpp (added)
c/objects/Bamg/Edge.h (added)
c/objects/Bamg/GeometricalEdge.cpp (added)
c/objects/Bamg/GeometricalEdge.h (added)
c/objects/Bamg/GeometricalSubDomain.cpp (added)
c/objects/Bamg/GeometricalSubDomain.h (added)
c/objects/Bamg/GeometricalVertex.cpp (added)
c/objects/Bamg/GeometricalVertex.h (added)
c/objects/Bamg/Geometry.cpp (added)
c/objects/Bamg/Geometry.h (added)
c/objects/Bamg/ListofIntersectionTriangles.cpp (added)
c/objects/Bamg/ListofIntersectionTriangles.h (added)
c/objects/Bamg/MatVVP2x2.cpp (added)
c/objects/Bamg/MeshVertex.cpp (added)
c/objects/Bamg/MeshVertex.h (added)
c/objects/Bamg/Metric.cpp (added)
c/objects/Bamg/Metric.h (added)
c/objects/Bamg/QuadTree.cpp (added)
c/objects/Bamg/QuadTree.h (added)
c/objects/Bamg/R2.h (added)
c/objects/Bamg/SetOfE4.cpp (added)
c/objects/Bamg/SetOfE4.h (added)
c/objects/Bamg/SubDomain.cpp (added)
c/objects/Bamg/SubDomain.h (added)
c/objects/Bamg/Triangle.cpp (added)
c/objects/Bamg/Triangle.h (added)
c/objects/Bamg/TriangleAdjacent.cpp (added)
c/objects/Bamg/TriangleAdjacent.h (added)
c/objects/Bamg/Triangles.cpp (added)
c/objects/Bamg/Triangles.h (added)
c/objects/Bamg/VertexOnEdge.cpp (added)
c/objects/Bamg/VertexOnEdge.h (added)
c/objects/Bamg/VertexOnGeom.cpp (added)
c/objects/Bamg/VertexOnGeom.h (added)
c/objects/Bamg/VertexOnVertex.cpp (added)
c/objects/Bamg/VertexOnVertex.h (added)
c/objects/Bamg/include.h (added)
c/objects/Bamg/macros.h (added)
c/objects/Bamg/typedefs.h (added)
c/objects/DakotaPlugin.cpp (modified) (1 diff)
c/objects/Loads/Riftfront.cpp (modified) (1 diff)
c/objects/Model.cpp (modified) (1 diff)
c/objects/objects.h (modified) (1 diff)
c/shared/Bamg (added)
c/shared/Bamg/Abs.h (added)
c/shared/Bamg/BigPrimeNumber.cpp (added)
c/shared/Bamg/BigPrimeNumber.h (added)
c/shared/Bamg/BinaryRand.h (added)
c/shared/Bamg/Exchange.h (added)
c/shared/Bamg/HeapSort.h (added)
c/shared/Bamg/Norm.h (added)
c/shared/Bamg/OppositeAngle.h (added)
c/shared/Bamg/det.h (added)
c/shared/Bamg/extrema.h (added)
c/shared/Bamg/shared.h (added)
c/shared/shared.h (modified) (1 diff)
c/solutions/ControlInitialization.cpp (modified) (1 diff)
c/solutions/ControlRestart.cpp (modified) (1 diff)
c/solutions/balancedthickness.cpp (modified) (1 diff)
c/solutions/balancedthickness2.cpp (modified) (1 diff)
c/solutions/balancedthickness2_core.cpp (modified) (1 diff)
c/solutions/balancedthickness_core.cpp (modified) (1 diff)
c/solutions/balancedvelocities.cpp (modified) (1 diff)
c/solutions/balancedvelocities_core.cpp (modified) (1 diff)
c/solutions/control_core.cpp (modified) (1 diff)
c/solutions/convergence.cpp (modified) (1 diff)
c/solutions/diagnostic.cpp (modified) (1 diff)
c/solutions/diagnostic_core.cpp (modified) (1 diff)
c/solutions/diagnostic_core_linear.cpp (modified) (1 diff)
c/solutions/diagnostic_core_nonlinear.cpp (modified) (1 diff)
c/solutions/gradjcompute_core.cpp (modified) (1 diff)
c/solutions/objectivefunctionC.cpp (modified) (1 diff)
c/solutions/prognostic.cpp (modified) (1 diff)
c/solutions/prognostic2.cpp (modified) (1 diff)
c/solutions/prognostic2_core.cpp (modified) (1 diff)
c/solutions/prognostic_core.cpp (modified) (1 diff)
c/solutions/slope_core.cpp (modified) (1 diff)
c/solutions/slopecompute_core.cpp (modified) (1 diff)
c/solutions/steadystate.cpp (modified) (1 diff)
c/solutions/steadystate_core.cpp (modified) (1 diff)
c/solutions/thermal.cpp (modified) (1 diff)
c/solutions/thermal_core.cpp (modified) (1 diff)
c/solutions/thermal_core_nonlinear.cpp (modified) (1 diff)
c/solutions/transient.cpp (modified) (1 diff)
c/solutions/transient_core.cpp (modified) (1 diff)
c/solutions/transient_core_2d.cpp (modified) (1 diff)
c/solutions/transient_core_3d.cpp (modified) (1 diff)
mex/AverageFilter/AverageFilter.h (modified) (1 diff)
mex/Bamg/Bamg.h (modified) (1 diff)
mex/BamgConvertMesh/BamgConvertMesh.h (modified) (1 diff)
mex/BuildNodeSets/BuildNodeSets.h (modified) (1 diff)
mex/ComputeBasalStress/ComputeBasalStress.h (modified) (1 diff)
mex/ComputePressure/ComputePressure.h (modified) (1 diff)
mex/ConfigureObjects/ConfigureObjects.h (modified) (1 diff)
mex/ContourToMesh/ContourToMesh.h (modified) (1 diff)
mex/ContourToNodes/ContourToNodes.h (modified) (1 diff)
mex/ControlConstrain/ControlConstrain.h (modified) (1 diff)
mex/ControlOptimization/ControlOptimization.h (modified) (1 diff)
mex/CostFunction/CostFunction.h (modified) (1 diff)
mex/DepthAverageInput/DepthAverageInput.h (modified) (1 diff)
mex/Dof/Dof.h (modified) (1 diff)
mex/Du/Du.h (modified) (1 diff)
mex/Echo/Echo.h (modified) (1 diff)
mex/ElementConnectivity/ElementConnectivity.h (modified) (1 diff)
mex/ExtrudeInput/ExtrudeInput.h (modified) (1 diff)
mex/FieldAverageOntoVertices/FieldAverageOntoVertices.h (modified) (1 diff)
mex/FieldDepthAverage/FieldDepthAverage.h (modified) (1 diff)
mex/FieldExtrude/FieldExtrude.h (modified) (1 diff)
mex/GetSolutionFromInputs/GetSolutionFromInputs.h (modified) (1 diff)
mex/Gradj/Gradj.h (modified) (1 diff)
mex/HoleFiller/HoleFiller.h (modified) (1 diff)
mex/InterpFromGridToMesh/InterpFromGridToMesh.h (modified) (1 diff)
mex/InterpFromMeshToGrid/InterpFromMeshToGrid.h (modified) (1 diff)
mex/InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.h (modified) (1 diff)
mex/InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.h (modified) (1 diff)
mex/MassFlux/MassFlux.h (modified) (1 diff)
mex/Mergesolutionfromftog/Mergesolutionfromftog.h (modified) (1 diff)
mex/MeshPartition/MeshPartition.h (modified) (1 diff)
mex/Misfit/Misfit.h (modified) (1 diff)
mex/ModelProcessor/ModelProcessor.h (modified) (1 diff)
mex/MpcNodes/MpcNodes.h (modified) (1 diff)
mex/NodeConnectivity/NodeConnectivity.h (modified) (1 diff)
mex/NormalizeConstraints/NormalizeConstraints.h (modified) (1 diff)
mex/Orth/Orth.h (modified) (1 diff)
mex/OutputRifts/OutputRifts.h (modified) (1 diff)
mex/ParameterOutput/ParameterOutput.h (modified) (1 diff)
mex/PenaltyConstraints/PenaltyConstraints.h (modified) (1 diff)
mex/PenaltySystemMatrices/PenaltySystemMatrices.h (modified) (1 diff)
mex/ProcessParams/ProcessParams.h (modified) (1 diff)
mex/PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.h (modified) (1 diff)
mex/Qmu/Qmu.h (modified) (1 diff)
mex/Reduceloadfromgtof/Reduceloadfromgtof.h (modified) (1 diff)
mex/Reducematrixfromgtof/Reducematrixfromgtof.h (modified) (1 diff)
mex/Reducevectorgtof/Reducevectorgtof.h (modified) (1 diff)
mex/Reducevectorgtos/Reducevectorgtos.h (modified) (1 diff)
mex/SetStructureField/SetStructureField.h (modified) (1 diff)
mex/Solver/Solver.h (modified) (1 diff)
mex/SpcNodes/SpcNodes.h (modified) (1 diff)
mex/SplitSolutionVector/SplitSolutionVector.h (modified) (1 diff)
mex/SystemMatrices/SystemMatrices.h (modified) (1 diff)
mex/Test/Test.h (modified) (1 diff)
mex/TriMesh/TriMesh.h (modified) (1 diff)
mex/TriMeshNoDensity/TriMeshNoDensity.h (modified) (1 diff)
mex/TriMeshProcessRifts/TriMeshProcessRifts.h (modified) (1 diff)
mex/TriMeshRefine/TriMeshRefine.h (modified) (1 diff)
mex/UpdateGeometry/UpdateGeometry.h (modified) (1 diff)
mex/UpdateInputsFromConstant/UpdateInputsFromConstant.h (modified) (1 diff)
mex/UpdateInputsFromSolution/UpdateInputsFromSolution.h (modified) (1 diff)
mex/UpdateInputsFromVector/UpdateInputsFromVector.h (modified) (1 diff)
mex/UpdateVertexPositions/UpdateVertexPositions.h (modified) (1 diff)

Legend:

: Unmodified
: Added
: Removed

issm/trunk/src/c/Makefile.am

-              r3895
+              r3913
                                         ./objects/Bamg/BamgOpts.h\
                                         ./objects/Bamg/BamgOpts.cpp\
+                                        ./objects/Bamg/CrackedEdge.h\
+                                        ./objects/Bamg/CrackedEdge.cpp\
+                                        ./objects/Bamg/Curve.h\
+                                        ./objects/Bamg/Curve.cpp\
+                                        ./objects/Bamg/Direction.h\
+                                        ./objects/Bamg/Direction.cpp\
+                                        ./objects/Bamg/DoubleAndInt.h\
+                                        ./objects/Bamg/Edge.h\
+                                        ./objects/Bamg/Edge.cpp\
+                                        ./objects/Bamg/GeometricalEdge.h\
+                                        ./objects/Bamg/GeometricalEdge.cpp\
+                                        ./objects/Bamg/GeometricalSubDomain.h\
+                                        ./objects/Bamg/GeometricalSubDomain.cpp\
+                                        ./objects/Bamg/GeometricalVertex.h\
+                                        ./objects/Bamg/GeometricalVertex.cpp\
+                                        ./objects/Bamg/Geometry.cpp\
+                                        ./objects/Bamg/Geometry.h\
+                                        ./objects/Bamg/ListofIntersectionTriangles.cpp\
+                                        ./objects/Bamg/ListofIntersectionTriangles.h\
+                                        ./objects/Bamg/MatVVP2x2.cpp\
+                                        ./objects/Bamg/Metric.cpp\
+                                        ./objects/Bamg/Metric.h\
+                                        ./objects/Bamg/QuadTree.cpp\
+                                        ./objects/Bamg/QuadTree.h\
+                                        ./objects/Bamg/R2.h\
+                                        ./objects/Bamg/SetOfE4.cpp\
+                                        ./objects/Bamg/SetOfE4.h\
+                                        ./objects/Bamg/SubDomain.h\
+                                        ./objects/Bamg/SubDomain.cpp\
+                                        ./objects/Bamg/TriangleAdjacent.h\
+                                        ./objects/Bamg/TriangleAdjacent.cpp\
+                                        ./objects/Bamg/Triangle.cpp\
+                                        ./objects/Bamg/Triangle.h\
+                                        ./objects/Bamg/Triangles.cpp\
+                                        ./objects/Bamg/Triangles.h\
+                                        ./objects/Bamg/MeshVertex.cpp\
+                                        ./objects/Bamg/MeshVertex.h\
+                                        ./objects/Bamg/VertexOnEdge.h\
+                                        ./objects/Bamg/VertexOnEdge.cpp\
+                                        ./objects/Bamg/VertexOnGeom.h\
+                                        ./objects/Bamg/VertexOnGeom.cpp\
+                                        ./objects/Bamg/VertexOnVertex.h\
+                                        ./objects/Bamg/VertexOnVertex.cpp\
                                         ./objects/Element.h\
                                         ./objects/Model.h\
 …
                                         ./shared/String/isdistributed.cpp\
                                         ./shared/String/sharedstring.h\
+                                        ./shared/Bamg/Abs.h \
+                                        ./shared/Bamg/BigPrimeNumber.h\
+                                        ./shared/Bamg/BigPrimeNumber.cpp\
+                                        ./shared/Bamg/BinaryRand.h \
+                                        ./shared/Bamg/det.h \
+                                        ./shared/Bamg/Exchange.h \
+                                        ./shared/Bamg/extrema.h \
+                                        ./shared/Bamg/HeapSort.h \
+                                        ./shared/Bamg/Norm.h \
+                                        ./shared/Bamg/OppositeAngle.h \
                                         ./toolkits/petsc\
                                         ./toolkits/petsc/patches\
 …
                                         ./EnumDefinitions/EnumAsString.cpp\
                                         ./EnumDefinitions/StringAsEnum.cpp\
+                                        ./ModelProcessorx/ModelProcessorx.h\
+                                        ./ModelProcessorx/Partitioning.cpp\
+                                        ./ModelProcessorx/CreateDataSets.cpp\
+                                        ./ModelProcessorx/CreateParameters.cpp\
+                                        ./ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp\
+                                        ./ModelProcessorx/DiagnosticHoriz/CreateElementsNodesAndMaterialsDiagnosticHoriz.cpp\
+                                        ./ModelProcessorx/DiagnosticHoriz/CreateConstraintsDiagnosticHoriz.cpp \
+                                        ./ModelProcessorx/DiagnosticHoriz/CreateLoadsDiagnosticHoriz.cpp\
+                                        ./ModelProcessorx/DiagnosticVert/CreateElementsNodesAndMaterialsDiagnosticVert.cpp\
+                                        ./ModelProcessorx/DiagnosticVert/CreateConstraintsDiagnosticVert.cpp \
+                                        ./ModelProcessorx/DiagnosticVert/CreateLoadsDiagnosticVert.cpp\
+                                        ./ModelProcessorx/DiagnosticHutter/CreateElementsNodesAndMaterialsDiagnosticHutter.cpp\
+                                        ./ModelProcessorx/DiagnosticHutter/CreateConstraintsDiagnosticHutter.cpp \
+                                        ./ModelProcessorx/DiagnosticHutter/CreateLoadsDiagnosticHutter.cpp\
+                                        ./ModelProcessorx/DiagnosticStokes/CreateElementsNodesAndMaterialsDiagnosticStokes.cpp\
+                                        ./ModelProcessorx/DiagnosticStokes/CreateConstraintsDiagnosticStokes.cpp \
+                                        ./ModelProcessorx/DiagnosticStokes/CreateLoadsDiagnosticStokes.cpp\
+                                        ./ModelProcessorx/SlopeCompute/CreateElementsNodesAndMaterialsSlopeCompute.cpp\
+                                        ./ModelProcessorx/SlopeCompute/CreateConstraintsSlopeCompute.cpp \
+                                        ./ModelProcessorx/SlopeCompute/CreateLoadsSlopeCompute.cpp\
+                                        ./ModelProcessorx/Control/CreateParametersControl.cpp\
+                                        ./ModelProcessorx/Thermal/CreateElementsNodesAndMaterialsThermal.cpp\
+                                        ./ModelProcessorx/Thermal/CreateConstraintsThermal.cpp\
+                                        ./ModelProcessorx/Thermal/CreateLoadsThermal.cpp\
+                                        ./ModelProcessorx/Melting/CreateElementsNodesAndMaterialsMelting.cpp\
+                                        ./ModelProcessorx/Melting/CreateConstraintsMelting.cpp\
+                                        ./ModelProcessorx/Melting/CreateLoadsMelting.cpp\
+                                        ./ModelProcessorx/Prognostic/CreateElementsNodesAndMaterialsPrognostic.cpp\
+                                        ./ModelProcessorx/Prognostic/CreateConstraintsPrognostic.cpp\
+                                        ./ModelProcessorx/Prognostic/CreateLoadsPrognostic.cpp\
+                                        ./ModelProcessorx/Prognostic2/CreateElementsNodesAndMaterialsPrognostic2.cpp\
+                                        ./ModelProcessorx/Prognostic2/CreateConstraintsPrognostic2.cpp\
+                                        ./ModelProcessorx/Prognostic2/CreateLoadsPrognostic2.cpp\
+                                        ./ModelProcessorx/Balancedthickness/CreateElementsNodesAndMaterialsBalancedthickness.cpp\
+                                        ./ModelProcessorx/Balancedthickness/CreateConstraintsBalancedthickness.cpp\
+                                        ./ModelProcessorx/Balancedthickness/CreateLoadsBalancedthickness.cpp\
+                                        ./ModelProcessorx/Balancedthickness2/CreateElementsNodesAndMaterialsBalancedthickness2.cpp\
+                                        ./ModelProcessorx/Balancedthickness2/CreateConstraintsBalancedthickness2.cpp\
+                                        ./ModelProcessorx/Balancedthickness2/CreateLoadsBalancedthickness2.cpp\
+                                        ./ModelProcessorx/Balancedvelocities/CreateElementsNodesAndMaterialsBalancedvelocities.cpp\
+                                        ./ModelProcessorx/Balancedvelocities/CreateConstraintsBalancedvelocities.cpp\
+                                        ./ModelProcessorx/Balancedvelocities/CreateLoadsBalancedvelocities.cpp\
+                                        ./ModelProcessorx/Qmu/CreateParametersQmu.cpp\
+                                        ./Dofx/Dofx.h\
+                                        ./Dofx/Dofx.cpp\
+                                        ./Dux/Dux.h\
+                                        ./Dux/Dux.cpp\
+                                        ./ControlConstrainx/ControlConstrainx.h\
+                                        ./ControlConstrainx/ControlConstrainx.cpp\
+                                        ./SurfaceAreax/SurfaceAreax.h\
+                                        ./SurfaceAreax/SurfaceAreax.cpp\
+                                        ./Misfitx/Misfitx.h\
+                                        ./Misfitx/Misfitx.cpp\
+                                        ./CostFunctionx/CostFunctionx.h\
+                                        ./CostFunctionx/CostFunctionx.cpp\
+                                        ./Orthx/Orthx.h\
+                                        ./Orthx/Orthx.cpp\
+                                        ./Gradjx/Gradjx.h\
+                                        ./Gradjx/Gradjx.cpp\
+                                        ./SplitSolutionVectorx/SplitSolutionVectorx.h\
+                                        ./SplitSolutionVectorx/SplitSolutionVectorx.cpp\
+                                        ./UpdateInputsFromConstantx/UpdateInputsFromConstantx.h\
+                                        ./UpdateInputsFromConstantx/UpdateInputsFromConstantx.cpp\
+                                        ./UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.h\
+                                        ./UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.cpp\
+                                        ./GetSolutionFromInputsx/GetSolutionFromInputsx.h\
+                                        ./GetSolutionFromInputsx/GetSolutionFromInputsx.cpp\
+                                        ./UpdateInputsFromVectorx/UpdateInputsFromVectorx.h\
+                                        ./UpdateInputsFromVectorx/UpdateInputsFromVectorx.cpp\
+                                        ./UpdateGeometryx/UpdateGeometryx.h\
+                                        ./UpdateGeometryx/UpdateGeometryx.cpp\
+                                        ./UpdateVertexPositionsx/UpdateVertexPositionsx.h\
+                                        ./UpdateVertexPositionsx/UpdateVertexPositionsx.cpp\
+                                        ./ConfigureObjectsx/ConfigureObjectsx.h\
+                                        ./ConfigureObjectsx/ConfigureObjectsx.cpp\
+                                        ./ComputeBasalStressx/ComputeBasalStressx.h\
+                                        ./ComputeBasalStressx/ComputeBasalStressx.cpp\
+                                        ./ComputePressurex/ComputePressurex.h\
+                                        ./ComputePressurex/ComputePressurex.cpp\
+                                        ./ComputeStrainRatex/ComputeStrainRatex.h\
+                                        ./ComputeStrainRatex/ComputeStrainRatex.cpp\
+                                        ./BuildNodeSetsx/BuildNodeSetsx.h\
+                                        ./BuildNodeSetsx/BuildNodeSetsx.cpp\
+                                        ./BuildNodeSetsx/PartitionSets.cpp\
+                                        ./SpcNodesx/SpcNodesx.h\
+                                        ./SpcNodesx/SpcNodesx.cpp\
+                                        ./MpcNodesx/MpcNodesx.h\
+                                        ./MpcNodesx/MpcNodesx.cpp\
+                                        ./InterpFromGridToMeshx/InterpFromGridToMeshx.cpp\
+                                        ./InterpFromGridToMeshx/InterpFromGridToMeshx.h\
+                                        ./InterpFromGridToMeshx/InterpFromGridToMeshxt.cpp\
+                                        ./InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp\
+                                        ./InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.h\
+                                        ./InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.cpp\
+                                        ./InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.h\
+                                        ./InterpFromMeshToGridx/InterpFromMeshToGridx.cpp\
+                                        ./InterpFromMeshToGridx/InterpFromMeshToGridx.h\
+                                        ./HoleFillerx/HoleFillerx.cpp\
+                                        ./HoleFillerx/HoleFillerx.h\
+                                        ./AverageFilterx/AverageFilterx.cpp\
+                                        ./AverageFilterx/AverageFilterx.h\
+                                        ./MeshPartitionx/MeshPartitionx.cpp\
+                                        ./MeshPartitionx/MeshPartitionx.h\
+                                        ./ContourToMeshx/ContourToMeshx.cpp\
+                                        ./ContourToMeshx/ContourToMeshxt.cpp\
+                                        ./ContourToMeshx/ContourToMeshx.h\
+                                        ./ContourToNodesx/ContourToNodesx.cpp\
+                                        ./ContourToNodesx/ContourToNodesx.h\
+                                        ./Reducevectorgtosx/Reducevectorgtosx.cpp\
+                                        ./Reducevectorgtosx/Reducevectorgtosx.h\
+                                        ./Reducevectorgtofx/Reducevectorgtofx.cpp\
+                                        ./Reducevectorgtofx/Reducevectorgtofx.h\
+                                        ./Reducematrixfromgtofx/Reducematrixfromgtofx.cpp\
+                                        ./Reducematrixfromgtofx/Reducematrixfromgton.cpp\
+                                        ./Reducematrixfromgtofx/Reducematrixfromgtofx.h\
+                                        ./Reduceloadfromgtofx/Reduceloadfromgtofx.h\
+                                        ./Reduceloadfromgtofx/Reduceloadfromgtofx.cpp\
+                                        ./NormalizeConstraintsx/NormalizeConstraintsx.cpp\
+                                        ./NormalizeConstraintsx/NormalizeConstraintsx.h\
+                                        ./NodeConnectivityx/NodeConnectivityx.cpp\
+                                        ./NodeConnectivityx/NodeConnectivityx.h\
+                                        ./ElementConnectivityx/ElementConnectivityx.cpp\
+                                        ./ElementConnectivityx/ElementConnectivityx.h\
+                                        ./MassFluxx/MassFluxx.cpp\
+                                        ./MassFluxx/MassFluxx.h\
+                                        ./SystemMatricesx/SystemMatricesx.cpp\
+                                        ./SystemMatricesx/SystemMatricesx.h\
+                                        ./PenaltyConstraintsx/PenaltyConstraintsx.cpp\
+                                        ./PenaltyConstraintsx/PenaltyConstraintsx.h\
+                                        ./PenaltyConstraintsx/RiftConstraints.cpp\
+                                        ./PenaltyConstraintsx/RiftConstraints.h\
+                                        ./PenaltySystemMatricesx/PenaltySystemMatricesx.cpp\
+                                        ./PenaltySystemMatricesx/PenaltySystemMatricesx.h\
+                                        ./Solverx/Solverx.cpp\
+                                        ./Solverx/Solverx.h\
+                                        ./Mergesolutionfromftogx/Mergesolutionfromftogx.cpp\
+                                        ./Mergesolutionfromftogx/Mergesolutionfromftogx.h\
+                                        ./ProcessParamsx/ProcessParamsx.cpp\
+                                        ./ProcessParamsx/ProcessParamsx.h\
+                                        ./PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.cpp\
+                                        ./PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.h\
+                                        ./Qmux/Qmux.h\
+                                        ./Qmux/Qmux.cpp\
+                                        ./Qmux/SpawnCore.cpp\
+                                        ./Qmux/SpawnCoreSerial.cpp\
+                                        ./FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.cpp\
+                                        ./FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.h\
+                                        ./FieldDepthAveragex/FieldDepthAveragex.cpp\
+                                        ./FieldDepthAveragex/FieldDepthAveragex.h\
+                                        ./DepthAverageInputx/DepthAverageInputx.cpp\
+                                        ./DepthAverageInputx/DepthAverageInputx.h\
+                                        ./FieldExtrudex/FieldExtrudex.cpp\
+                                        ./FieldExtrudex/FieldExtrudex.h\
+                                        ./InputToResultx/InputToResultx.cpp\
+                                        ./InputToResultx/InputToResultx.h\
+                                        ./ExtrudeInputx/ExtrudeInputx.cpp\
+                                        ./ExtrudeInputx/ExtrudeInputx.h\
+                                        ./OutputRiftsx/OutputRiftsx.h\
+                                        ./OutputRiftsx/OutputRiftsx.cpp\
+                                        ./Bamgx/Bamgx.cpp\
+                                        ./Bamgx/Bamgx.h\
+                                        ./Bamgx/include/include.h \
+                                        ./Bamgx/include/macros.h \
+                                        ./Bamgx/include/typedefs.h \
+                                        ./Bamgx/objects/BamgObjects.h \
+                                        ./Bamgx/objects/CrackedEdge.h\
+                                        ./Bamgx/objects/CrackedEdge.cpp\
+                                        ./Bamgx/objects/Curve.h\
+                                        ./Bamgx/objects/Curve.cpp\
+                                        ./Bamgx/objects/Direction.h\
+                                        ./Bamgx/objects/Direction.cpp\
+                                        ./Bamgx/objects/DoubleAndInt.h\
+                                        ./Bamgx/objects/Edge.h\
+                                        ./Bamgx/objects/Edge.cpp\
+                                        ./Bamgx/objects/GeometricalEdge.h\
+                                        ./Bamgx/objects/GeometricalEdge.cpp\
+                                        ./Bamgx/objects/GeometricalSubDomain.h\
+                                        ./Bamgx/objects/GeometricalSubDomain.cpp\
+                                        ./Bamgx/objects/GeometricalVertex.h\
+                                        ./Bamgx/objects/GeometricalVertex.cpp\
+                                        ./Bamgx/objects/Geometry.cpp\
+                                        ./Bamgx/objects/Geometry.h\
+                                        ./Bamgx/objects/ListofIntersectionTriangles.cpp\
+                                        ./Bamgx/objects/ListofIntersectionTriangles.h\
+                                        ./Bamgx/objects/MatVVP2x2.cpp\
+                                        ./Bamgx/objects/Metric.cpp\
+                                        ./Bamgx/objects/Metric.h\
+                                        ./Bamgx/objects/QuadTree.cpp\
+                                        ./Bamgx/objects/QuadTree.h\
+                                        ./Bamgx/objects/R2.h\
+                                        ./Bamgx/objects/SetOfE4.cpp\
+                                        ./Bamgx/objects/SetOfE4.h\
+                                        ./Bamgx/objects/SubDomain.h\
+                                        ./Bamgx/objects/SubDomain.cpp\
+                                        ./Bamgx/objects/TriangleAdjacent.h\
+                                        ./Bamgx/objects/TriangleAdjacent.cpp\
+                                        ./Bamgx/objects/Triangle.cpp\
+                                        ./Bamgx/objects/Triangle.h\
+                                        ./Bamgx/objects/Triangles.cpp\
+                                        ./Bamgx/objects/Triangles.h\
+                                        ./Bamgx/objects/MeshVertex.cpp\
+                                        ./Bamgx/objects/MeshVertex.h\
+                                        ./Bamgx/objects/VertexOnEdge.h\
+                                        ./Bamgx/objects/VertexOnEdge.cpp\
+                                        ./Bamgx/objects/VertexOnGeom.h\
+                                        ./Bamgx/objects/VertexOnGeom.cpp\
+                                        ./Bamgx/objects/VertexOnVertex.h\
+                                        ./Bamgx/objects/VertexOnVertex.cpp\
+                                        ./Bamgx/shared/Abs.h \
+                                        ./Bamgx/shared/BigPrimeNumber.h\
+                                        ./Bamgx/shared/BigPrimeNumber.cpp\
+                                        ./Bamgx/shared/BinaryRand.h \
+                                        ./Bamgx/shared/det.h \
+                                        ./Bamgx/shared/Exchange.h \
+                                        ./Bamgx/shared/extrema.h \
+                                        ./Bamgx/shared/HeapSort.h \
+                                        ./Bamgx/shared/Norm.h \
+                                        ./Bamgx/shared/OppositeAngle.h \
+                                        ./Bamgx/shared/shared.h\
+                                        ./BamgConvertMeshx/BamgConvertMeshx.cpp\
+                                        ./BamgConvertMeshx/BamgConvertMeshx.h
+                                        ./modules/ModelProcessorx/ModelProcessorx.h\
+                                        ./modules/ModelProcessorx/Partitioning.cpp\
+                                        ./modules/ModelProcessorx/CreateDataSets.cpp\
+                                        ./modules/ModelProcessorx/CreateParameters.cpp\
+                                        ./modules/ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHoriz/CreateElementsNodesAndMaterialsDiagnosticHoriz.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHoriz/CreateConstraintsDiagnosticHoriz.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticHoriz/CreateLoadsDiagnosticHoriz.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticVert/CreateElementsNodesAndMaterialsDiagnosticVert.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticVert/CreateConstraintsDiagnosticVert.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticVert/CreateLoadsDiagnosticVert.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHutter/CreateElementsNodesAndMaterialsDiagnosticHutter.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHutter/CreateConstraintsDiagnosticHutter.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticHutter/CreateLoadsDiagnosticHutter.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticStokes/CreateElementsNodesAndMaterialsDiagnosticStokes.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticStokes/CreateConstraintsDiagnosticStokes.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticStokes/CreateLoadsDiagnosticStokes.cpp\
+                                        ./modules/ModelProcessorx/SlopeCompute/CreateElementsNodesAndMaterialsSlopeCompute.cpp\
+                                        ./modules/ModelProcessorx/SlopeCompute/CreateConstraintsSlopeCompute.cpp \
+                                        ./modules/ModelProcessorx/SlopeCompute/CreateLoadsSlopeCompute.cpp\
+                                        ./modules/ModelProcessorx/Control/CreateParametersControl.cpp\
+                                        ./modules/ModelProcessorx/Thermal/CreateElementsNodesAndMaterialsThermal.cpp\
+                                        ./modules/ModelProcessorx/Thermal/CreateConstraintsThermal.cpp\
+                                        ./modules/ModelProcessorx/Thermal/CreateLoadsThermal.cpp\
+                                        ./modules/ModelProcessorx/Melting/CreateElementsNodesAndMaterialsMelting.cpp\
+                                        ./modules/ModelProcessorx/Melting/CreateConstraintsMelting.cpp\
+                                        ./modules/ModelProcessorx/Melting/CreateLoadsMelting.cpp\
+                                        ./modules/ModelProcessorx/Prognostic/CreateElementsNodesAndMaterialsPrognostic.cpp\
+                                        ./modules/ModelProcessorx/Prognostic/CreateConstraintsPrognostic.cpp\
+                                        ./modules/ModelProcessorx/Prognostic/CreateLoadsPrognostic.cpp\
+                                        ./modules/ModelProcessorx/Prognostic2/CreateElementsNodesAndMaterialsPrognostic2.cpp\
+                                        ./modules/ModelProcessorx/Prognostic2/CreateConstraintsPrognostic2.cpp\
+                                        ./modules/ModelProcessorx/Prognostic2/CreateLoadsPrognostic2.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness/CreateElementsNodesAndMaterialsBalancedthickness.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness/CreateConstraintsBalancedthickness.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness/CreateLoadsBalancedthickness.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness2/CreateElementsNodesAndMaterialsBalancedthickness2.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness2/CreateConstraintsBalancedthickness2.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness2/CreateLoadsBalancedthickness2.cpp\
+                                        ./modules/ModelProcessorx/Balancedvelocities/CreateElementsNodesAndMaterialsBalancedvelocities.cpp\
+                                        ./modules/ModelProcessorx/Balancedvelocities/CreateConstraintsBalancedvelocities.cpp\
+                                        ./modules/ModelProcessorx/Balancedvelocities/CreateLoadsBalancedvelocities.cpp\
+                                        ./modules/ModelProcessorx/Qmu/CreateParametersQmu.cpp\
+                                        ./modules/Dofx/Dofx.h\
+                                        ./modules/Dofx/Dofx.cpp\
+                                        ./modules/Dux/Dux.h\
+                                        ./modules/Dux/Dux.cpp\
+                                        ./modules/ControlConstrainx/ControlConstrainx.h\
+                                        ./modules/ControlConstrainx/ControlConstrainx.cpp\
+                                        ./modules/SurfaceAreax/SurfaceAreax.h\
+                                        ./modules/SurfaceAreax/SurfaceAreax.cpp\
+                                        ./modules/Misfitx/Misfitx.h\
+                                        ./modules/Misfitx/Misfitx.cpp\
+                                        ./modules/CostFunctionx/CostFunctionx.h\
+                                        ./modules/CostFunctionx/CostFunctionx.cpp\
+                                        ./modules/Orthx/Orthx.h\
+                                        ./modules/Orthx/Orthx.cpp\
+                                        ./modules/Gradjx/Gradjx.h\
+                                        ./modules/Gradjx/Gradjx.cpp\
+                                        ./modules/SplitSolutionVectorx/SplitSolutionVectorx.h\
+                                        ./modules/SplitSolutionVectorx/SplitSolutionVectorx.cpp\
+                                        ./modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.h\
+                                        ./modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.cpp\
+                                        ./modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.h\
+                                        ./modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.cpp\
+                                        ./modules/GetSolutionFromInputsx/GetSolutionFromInputsx.h\
+                                        ./modules/GetSolutionFromInputsx/GetSolutionFromInputsx.cpp\
+                                        ./modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.h\
+                                        ./modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.cpp\
+                                        ./modules/UpdateGeometryx/UpdateGeometryx.h\
+                                        ./modules/UpdateGeometryx/UpdateGeometryx.cpp\
+                                        ./modules/UpdateVertexPositionsx/UpdateVertexPositionsx.h\
+                                        ./modules/UpdateVertexPositionsx/UpdateVertexPositionsx.cpp\
+                                        ./modules/ConfigureObjectsx/ConfigureObjectsx.h\
+                                        ./modules/ConfigureObjectsx/ConfigureObjectsx.cpp\
+                                        ./modules/ComputeBasalStressx/ComputeBasalStressx.h\
+                                        ./modules/ComputeBasalStressx/ComputeBasalStressx.cpp\
+                                        ./modules/ComputePressurex/ComputePressurex.h\
+                                        ./modules/ComputePressurex/ComputePressurex.cpp\
+                                        ./modules/ComputeStrainRatex/ComputeStrainRatex.h\
+                                        ./modules/ComputeStrainRatex/ComputeStrainRatex.cpp\
+                                        ./modules/BuildNodeSetsx/BuildNodeSetsx.h\
+                                        ./modules/BuildNodeSetsx/BuildNodeSetsx.cpp\
+                                        ./modules/BuildNodeSetsx/PartitionSets.cpp\
+                                        ./modules/SpcNodesx/SpcNodesx.h\
+                                        ./modules/SpcNodesx/SpcNodesx.cpp\
+                                        ./modules/MpcNodesx/MpcNodesx.h\
+                                        ./modules/MpcNodesx/MpcNodesx.cpp\
+                                        ./modules/InterpFromGridToMeshx/InterpFromGridToMeshx.cpp\
+                                        ./modules/InterpFromGridToMeshx/InterpFromGridToMeshx.h\
+                                        ./modules/InterpFromGridToMeshx/InterpFromGridToMeshxt.cpp\
+                                        ./modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp\
+                                        ./modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.h\
+                                        ./modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.cpp\
+                                        ./modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.h\
+                                        ./modules/InterpFromMeshToGridx/InterpFromMeshToGridx.cpp\
+                                        ./modules/InterpFromMeshToGridx/InterpFromMeshToGridx.h\
+                                        ./modules/HoleFillerx/HoleFillerx.cpp\
+                                        ./modules/HoleFillerx/HoleFillerx.h\
+                                        ./modules/AverageFilterx/AverageFilterx.cpp\
+                                        ./modules/AverageFilterx/AverageFilterx.h\
+                                        ./modules/MeshPartitionx/MeshPartitionx.cpp\
+                                        ./modules/MeshPartitionx/MeshPartitionx.h\
+                                        ./modules/ContourToMeshx/ContourToMeshx.cpp\
+                                        ./modules/ContourToMeshx/ContourToMeshxt.cpp\
+                                        ./modules/ContourToMeshx/ContourToMeshx.h\
+                                        ./modules/ContourToNodesx/ContourToNodesx.cpp\
+                                        ./modules/ContourToNodesx/ContourToNodesx.h\
+                                        ./modules/Reducevectorgtosx/Reducevectorgtosx.cpp\
+                                        ./modules/Reducevectorgtosx/Reducevectorgtosx.h\
+                                        ./modules/Reducevectorgtofx/Reducevectorgtofx.cpp\
+                                        ./modules/Reducevectorgtofx/Reducevectorgtofx.h\
+                                        ./modules/Reducematrixfromgtofx/Reducematrixfromgtofx.cpp\
+                                        ./modules/Reducematrixfromgtofx/Reducematrixfromgton.cpp\
+                                        ./modules/Reducematrixfromgtofx/Reducematrixfromgtofx.h\
+                                        ./modules/Reduceloadfromgtofx/Reduceloadfromgtofx.h\
+                                        ./modules/Reduceloadfromgtofx/Reduceloadfromgtofx.cpp\
+                                        ./modules/NormalizeConstraintsx/NormalizeConstraintsx.cpp\
+                                        ./modules/NormalizeConstraintsx/NormalizeConstraintsx.h\
+                                        ./modules/NodeConnectivityx/NodeConnectivityx.cpp\
+                                        ./modules/NodeConnectivityx/NodeConnectivityx.h\
+                                        ./modules/ElementConnectivityx/ElementConnectivityx.cpp\
+                                        ./modules/ElementConnectivityx/ElementConnectivityx.h\
+                                        ./modules/MassFluxx/MassFluxx.cpp\
+                                        ./modules/MassFluxx/MassFluxx.h\
+                                        ./modules/SystemMatricesx/SystemMatricesx.cpp\
+                                        ./modules/SystemMatricesx/SystemMatricesx.h\
+                                        ./modules/PenaltyConstraintsx/PenaltyConstraintsx.cpp\
+                                        ./modules/PenaltyConstraintsx/PenaltyConstraintsx.h\
+                                        ./modules/PenaltyConstraintsx/RiftConstraints.cpp\
+                                        ./modules/PenaltyConstraintsx/RiftConstraints.h\
+                                        ./modules/PenaltySystemMatricesx/PenaltySystemMatricesx.cpp\
+                                        ./modules/PenaltySystemMatricesx/PenaltySystemMatricesx.h\
+                                        ./modules/Solverx/Solverx.cpp\
+                                        ./modules/Solverx/Solverx.h\
+                                        ./modules/Mergesolutionfromftogx/Mergesolutionfromftogx.cpp\
+                                        ./modules/Mergesolutionfromftogx/Mergesolutionfromftogx.h\
+                                        ./modules/ProcessParamsx/ProcessParamsx.cpp\
+                                        ./modules/ProcessParamsx/ProcessParamsx.h\
+                                        ./modules/PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.cpp\
+                                        ./modules/PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.h\
+                                        ./modules/Qmux/Qmux.h\
+                                        ./modules/Qmux/Qmux.cpp\
+                                        ./modules/Qmux/SpawnCore.cpp\
+                                        ./modules/Qmux/SpawnCoreSerial.cpp\
+                                        ./modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.cpp\
+                                        ./modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.h\
+                                        ./modules/FieldDepthAveragex/FieldDepthAveragex.cpp\
+                                        ./modules/FieldDepthAveragex/FieldDepthAveragex.h\
+                                        ./modules/DepthAverageInputx/DepthAverageInputx.cpp\
+                                        ./modules/DepthAverageInputx/DepthAverageInputx.h\
+                                        ./modules/FieldExtrudex/FieldExtrudex.cpp\
+                                        ./modules/FieldExtrudex/FieldExtrudex.h\
+                                        ./modules/InputToResultx/InputToResultx.cpp\
+                                        ./modules/InputToResultx/InputToResultx.h\
+                                        ./modules/ExtrudeInputx/ExtrudeInputx.cpp\
+                                        ./modules/ExtrudeInputx/ExtrudeInputx.h\
+                                        ./modules/OutputRiftsx/OutputRiftsx.h\
+                                        ./modules/OutputRiftsx/OutputRiftsx.cpp\
+                                        ./modules/Bamgx/Bamgx.cpp\
+                                        ./modules/Bamgx/Bamgx.h\
+                                        ./modules/BamgConvertMeshx/BamgConvertMeshx.cpp\
+                                        ./modules/BamgConvertMeshx/BamgConvertMeshx.h
 libISSM_a_CXXFLAGS = -fPIC -DMATLAB -D_SERIAL_ -ansi -D_GNU_SOURCE -fno-omit-frame-pointer -pthread -D_CPP_  $(CXXOPTFLAGS)
 …
                                         ./objects/Bamg/BamgOpts.h\
                                         ./objects/Bamg/BamgOpts.cpp\
+                                        ./objects/Bamg/BamgObjects.h \
+                                        ./objects/Bamg/CrackedEdge.h\
+                                        ./objects/Bamg/CrackedEdge.cpp\
+                                        ./objects/Bamg/Curve.h\
+                                        ./objects/Bamg/Curve.cpp\
+                                        ./objects/Bamg/Direction.h\
+                                        ./objects/Bamg/Direction.cpp\
+                                        ./objects/Bamg/DoubleAndInt.h\
+                                        ./objects/Bamg/Edge.h\
+                                        ./objects/Bamg/Edge.cpp\
+                                        ./objects/Bamg/GeometricalEdge.h\
+                                        ./objects/Bamg/GeometricalEdge.cpp\
+                                        ./objects/Bamg/GeometricalSubDomain.h\
+                                        ./objects/Bamg/GeometricalSubDomain.cpp\
+                                        ./objects/Bamg/GeometricalVertex.h\
+                                        ./objects/Bamg/GeometricalVertex.cpp\
+                                        ./objects/Bamg/Geometry.cpp\
+                                        ./objects/Bamg/Geometry.h\
+                                        ./objects/Bamg/ListofIntersectionTriangles.cpp\
+                                        ./objects/Bamg/ListofIntersectionTriangles.h\
+                                        ./objects/Bamg/MatVVP2x2.cpp\
+                                        ./objects/Bamg/Metric.cpp\
+                                        ./objects/Bamg/Metric.h\
+                                        ./objects/Bamg/QuadTree.cpp\
+                                        ./objects/Bamg/QuadTree.h\
+                                        ./objects/Bamg/R2.h\
+                                        ./objects/Bamg/SetOfE4.cpp\
+                                        ./objects/Bamg/SetOfE4.h\
+                                        ./objects/Bamg/SubDomain.h\
+                                        ./objects/Bamg/SubDomain.cpp\
+                                        ./objects/Bamg/TriangleAdjacent.h\
+                                        ./objects/Bamg/TriangleAdjacent.cpp\
+                                        ./objects/Bamg/Triangle.cpp\
+                                        ./objects/Bamg/Triangle.h\
+                                        ./objects/Bamg/Triangles.cpp\
+                                        ./objects/Bamg/Triangles.h\
+                                        ./objects/Bamg/MeshVertex.cpp\
+                                        ./objects/Bamg/MeshVertex.h\
+                                        ./objects/Bamg/VertexOnEdge.h\
+                                        ./objects/Bamg/VertexOnEdge.cpp\
+                                        ./objects/Bamg/VertexOnGeom.h\
+                                        ./objects/Bamg/VertexOnGeom.cpp\
+                                        ./objects/Bamg/VertexOnVertex.h\
                                         ./objects/Element.h\
                                         ./objects/Model.h\
 …
                                         ./shared/String/isdistributed.cpp\
                                         ./shared/String/sharedstring.h\
+                                        ./shared/Bamg/Abs.h \
+                                        ./shared/Bamg/BigPrimeNumber.h\
+                                        ./shared/Bamg/BigPrimeNumber.cpp\
+                                        ./shared/Bamg/BinaryRand.h \
+                                        ./shared/Bamg/det.h \
+                                        ./shared/Bamg/Exchange.h \
+                                        ./shared/Bamg/extrema.h \
+                                        ./shared/Bamg/HeapSort.h \
+                                        ./shared/Bamg/Norm.h \
+                                        ./shared/Bamg/OppositeAngle.h \
                                         ./toolkits/petsc\
                                         ./toolkits/petsc/patches\
 …
                                         ./EnumDefinitions/EnumAsString.cpp\
                                         ./EnumDefinitions/StringAsEnum.cpp\
                                         ./ModelProcessorx/ModelProcessorx.h\
                                         ./ModelProcessorx/Partitioning.cpp\
                                         ./ModelProcessorx/CreateDataSets.cpp\
                                         ./ModelProcessorx/CreateParameters.cpp\
                                         ./ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp\
                                         ./ModelProcessorx/DiagnosticHoriz/CreateElementsNodesAndMaterialsDiagnosticHoriz.cpp\
                                         ./ModelProcessorx/DiagnosticHoriz/CreateConstraintsDiagnosticHoriz.cpp \
                                         ./ModelProcessorx/DiagnosticHoriz/CreateLoadsDiagnosticHoriz.cpp\
                                         ./ModelProcessorx/DiagnosticVert/CreateElementsNodesAndMaterialsDiagnosticVert.cpp\
                                         ./ModelProcessorx/DiagnosticVert/CreateConstraintsDiagnosticVert.cpp \
                                         ./ModelProcessorx/DiagnosticVert/CreateLoadsDiagnosticVert.cpp\
                                         ./ModelProcessorx/DiagnosticHutter/CreateElementsNodesAndMaterialsDiagnosticHutter.cpp\
                                         ./ModelProcessorx/DiagnosticHutter/CreateConstraintsDiagnosticHutter.cpp \
                                         ./ModelProcessorx/DiagnosticHutter/CreateLoadsDiagnosticHutter.cpp\
                                         ./ModelProcessorx/DiagnosticStokes/CreateElementsNodesAndMaterialsDiagnosticStokes.cpp\
                                         ./ModelProcessorx/DiagnosticStokes/CreateConstraintsDiagnosticStokes.cpp \
                                         ./ModelProcessorx/DiagnosticStokes/CreateLoadsDiagnosticStokes.cpp\
                                         ./ModelProcessorx/SlopeCompute/CreateElementsNodesAndMaterialsSlopeCompute.cpp\
                                         ./ModelProcessorx/SlopeCompute/CreateConstraintsSlopeCompute.cpp \
                                         ./ModelProcessorx/SlopeCompute/CreateLoadsSlopeCompute.cpp\
                                         ./ModelProcessorx/Control/CreateParametersControl.cpp\
                                         ./ModelProcessorx/Thermal/CreateElementsNodesAndMaterialsThermal.cpp\
                                         ./ModelProcessorx/Thermal/CreateConstraintsThermal.cpp\
                                         ./ModelProcessorx/Thermal/CreateLoadsThermal.cpp\
                                         ./ModelProcessorx/Melting/CreateElementsNodesAndMaterialsMelting.cpp\
                                         ./ModelProcessorx/Melting/CreateConstraintsMelting.cpp\
                                         ./ModelProcessorx/Melting/CreateLoadsMelting.cpp\
                                         ./ModelProcessorx/Prognostic/CreateElementsNodesAndMaterialsPrognostic.cpp\
                                         ./ModelProcessorx/Prognostic/CreateConstraintsPrognostic.cpp\
                                         ./ModelProcessorx/Prognostic/CreateLoadsPrognostic.cpp\
                                         ./ModelProcessorx/Prognostic2/CreateElementsNodesAndMaterialsPrognostic2.cpp\
                                         ./ModelProcessorx/Prognostic2/CreateConstraintsPrognostic2.cpp\
                                         ./ModelProcessorx/Prognostic2/CreateLoadsPrognostic2.cpp\
                                         ./ModelProcessorx/Balancedthickness/CreateElementsNodesAndMaterialsBalancedthickness.cpp\
                                         ./ModelProcessorx/Balancedthickness/CreateConstraintsBalancedthickness.cpp\
                                         ./ModelProcessorx/Balancedthickness/CreateLoadsBalancedthickness.cpp\
                                         ./ModelProcessorx/Balancedthickness2/CreateElementsNodesAndMaterialsBalancedthickness2.cpp\
                                         ./ModelProcessorx/Balancedthickness2/CreateConstraintsBalancedthickness2.cpp\
                                         ./ModelProcessorx/Balancedthickness2/CreateLoadsBalancedthickness2.cpp\
                                         ./ModelProcessorx/Balancedvelocities/CreateElementsNodesAndMaterialsBalancedvelocities.cpp\
                                         ./ModelProcessorx/Balancedvelocities/CreateConstraintsBalancedvelocities.cpp\
                                         ./ModelProcessorx/Balancedvelocities/CreateLoadsBalancedvelocities.cpp\
                                         ./ModelProcessorx/Qmu/CreateParametersQmu.cpp\
                                         ./Dofx/Dofx.h\
                                         ./Dofx/Dofx.cpp\
                                         ./Dux/Dux.h\
                                         ./Dux/Dux.cpp\
                                         ./ControlConstrainx/ControlConstrainx.h\
                                         ./ControlConstrainx/ControlConstrainx.cpp\
                                         ./SurfaceAreax/SurfaceAreax.h\
                                         ./SurfaceAreax/SurfaceAreax.cpp\
                                         ./Misfitx/Misfitx.h\
                                         ./Misfitx/Misfitx.cpp\
                                         ./CostFunctionx/CostFunctionx.h\
                                         ./CostFunctionx/CostFunctionx.cpp\
                                         ./Orthx/Orthx.h\
                                         ./Orthx/Orthx.cpp\
                                         ./Gradjx/Gradjx.h\
                                         ./Gradjx/Gradjx.cpp\
                                         ./SplitSolutionVectorx/SplitSolutionVectorx.h\
                                         ./SplitSolutionVectorx/SplitSolutionVectorx.cpp\
                                         ./UpdateInputsFromConstantx/UpdateInputsFromConstantx.h\
                                         ./UpdateInputsFromConstantx/UpdateInputsFromConstantx.cpp\
                                         ./UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.h\
                                         ./UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.cpp\
                                         ./GetSolutionFromInputsx/GetSolutionFromInputsx.h\
                                         ./GetSolutionFromInputsx/GetSolutionFromInputsx.cpp\
                                         ./UpdateInputsFromVectorx/UpdateInputsFromVectorx.h\
                                         ./UpdateInputsFromVectorx/UpdateInputsFromVectorx.cpp\
                                         ./UpdateGeometryx/UpdateGeometryx.h\
                                         ./UpdateGeometryx/UpdateGeometryx.cpp\
                                         ./UpdateVertexPositionsx/UpdateVertexPositionsx.h\
                                         ./UpdateVertexPositionsx/UpdateVertexPositionsx.cpp\
                                         ./ConfigureObjectsx/ConfigureObjectsx.h\
                                         ./ConfigureObjectsx/ConfigureObjectsx.cpp\
                                         ./ComputeBasalStressx/ComputeBasalStressx.h\
                                         ./ComputeBasalStressx/ComputeBasalStressx.cpp\
                                         ./ComputePressurex/ComputePressurex.h\
                                         ./ComputePressurex/ComputePressurex.cpp\
                                         ./ComputeStrainRatex/ComputeStrainRatex.h\
                                         ./ComputeStrainRatex/ComputeStrainRatex.cpp\
                                         ./BuildNodeSetsx/BuildNodeSetsx.h\
                                         ./BuildNodeSetsx/BuildNodeSetsx.cpp\
                                         ./BuildNodeSetsx/PartitionSets.cpp\
                                         ./SpcNodesx/SpcNodesx.h\
                                         ./SpcNodesx/SpcNodesx.cpp\
                                         ./MpcNodesx/MpcNodesx.h\
                                         ./MpcNodesx/MpcNodesx.cpp\
                                         ./InterpFromGridToMeshx/InterpFromGridToMeshx.cpp\
                                         ./InterpFromGridToMeshx/InterpFromGridToMeshx.h\
                                         ./InterpFromGridToMeshx/InterpFromGridToMeshxt.cpp\
                                         ./InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp\
                                         ./InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.h\
                                         ./InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.cpp\
                                         ./InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.h\
                                         ./InterpFromMeshToGridx/InterpFromMeshToGridx.cpp\
                                         ./InterpFromMeshToGridx/InterpFromMeshToGridx.h\
                                         ./HoleFillerx/HoleFillerx.cpp\
                                         ./HoleFillerx/HoleFillerx.h\
                                         ./AverageFilterx/AverageFilterx.cpp\
                                         ./AverageFilterx/AverageFilterx.h\
                                         ./MeshPartitionx/MeshPartitionx.cpp\
                                         ./MeshPartitionx/MeshPartitionx.h\
                                         ./ContourToMeshx/ContourToMeshx.cpp\
                                         ./ContourToMeshx/ContourToMeshxt.cpp\
                                         ./ContourToMeshx/ContourToMeshx.h\
                                         ./Reducevectorgtosx/Reducevectorgtosx.cpp\
                                         ./Reducevectorgtosx/Reducevectorgtosx.h\
                                         ./Reducevectorgtofx/Reducevectorgtofx.cpp\
                                         ./Reducevectorgtofx/Reducevectorgtofx.h\
                                         ./Reducematrixfromgtofx/Reducematrixfromgtofx.cpp\
                                         ./Reducematrixfromgtofx/Reducematrixfromgton.cpp\
                                         ./Reducematrixfromgtofx/Reducematrixfromgtofx.h\
                                         ./Reduceloadfromgtofx/Reduceloadfromgtofx.h\
                                         ./Reduceloadfromgtofx/Reduceloadfromgtofx.cpp\
                                         ./NormalizeConstraintsx/NormalizeConstraintsx.cpp\
                                         ./NormalizeConstraintsx/NormalizeConstraintsx.h\
                                         ./MassFluxx/MassFluxx.cpp\
                                         ./MassFluxx/MassFluxx.h\
                                         ./SystemMatricesx/SystemMatricesx.cpp\
                                         ./SystemMatricesx/SystemMatricesx.h\
                                         ./PenaltyConstraintsx/PenaltyConstraintsx.cpp\
                                         ./PenaltyConstraintsx/PenaltyConstraintsx.h\
                                         ./PenaltyConstraintsx/RiftConstraints.cpp\
                                         ./PenaltyConstraintsx/RiftConstraints.h\
                                         ./PenaltySystemMatricesx/PenaltySystemMatricesx.cpp\
                                         ./PenaltySystemMatricesx/PenaltySystemMatricesx.h\
                                         ./Solverx/Solverx.cpp\
                                         ./Solverx/Solverx.h\
                                         ./Mergesolutionfromftogx/Mergesolutionfromftogx.cpp\
                                         ./Mergesolutionfromftogx/Mergesolutionfromftogx.h\
                                         ./ProcessParamsx/ProcessParamsx.cpp\
                                         ./ProcessParamsx/ProcessParamsx.h\
                                         ./Qmux/Qmux.h\
                                         ./Qmux/Qmux.cpp\
                                         ./Qmux/DakotaResponses.cpp\
                                         ./Qmux/SpawnCore.cpp\
                                         ./Qmux/SpawnCoreParallel.cpp\
                                         ./FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.cpp\
                                         ./FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.h\
                                         ./FieldDepthAveragex/FieldDepthAveragex.cpp\
                                         ./FieldDepthAveragex/FieldDepthAveragex.h\
                                         ./DepthAverageInputx/DepthAverageInputx.cpp\
                                         ./DepthAverageInputx/DepthAverageInputx.h\
                                         ./FieldExtrudex/FieldExtrudex.cpp\
                                         ./FieldExtrudex/FieldExtrudex.h\
                                         ./InputToResultx/InputToResultx.cpp\
                                         ./InputToResultx/InputToResultx.h\
                                         ./ExtrudeInputx/ExtrudeInputx.cpp\
                                         ./ExtrudeInputx/ExtrudeInputx.h\
                                         ./OutputRiftsx/OutputRiftsx.h\
                                         ./OutputRiftsx/OutputRiftsx.cpp\
+                                        ./modules/ModelProcessorx/ModelProcessorx.h\
+                                        ./modules/ModelProcessorx/Partitioning.cpp\
+                                        ./modules/ModelProcessorx/CreateDataSets.cpp\
+                                        ./modules/ModelProcessorx/CreateParameters.cpp\
+                                        ./modules/ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHoriz/CreateElementsNodesAndMaterialsDiagnosticHoriz.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHoriz/CreateConstraintsDiagnosticHoriz.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticHoriz/CreateLoadsDiagnosticHoriz.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticVert/CreateElementsNodesAndMaterialsDiagnosticVert.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticVert/CreateConstraintsDiagnosticVert.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticVert/CreateLoadsDiagnosticVert.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHutter/CreateElementsNodesAndMaterialsDiagnosticHutter.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticHutter/CreateConstraintsDiagnosticHutter.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticHutter/CreateLoadsDiagnosticHutter.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticStokes/CreateElementsNodesAndMaterialsDiagnosticStokes.cpp\
+                                        ./modules/ModelProcessorx/DiagnosticStokes/CreateConstraintsDiagnosticStokes.cpp \
+                                        ./modules/ModelProcessorx/DiagnosticStokes/CreateLoadsDiagnosticStokes.cpp\
+                                        ./modules/ModelProcessorx/SlopeCompute/CreateElementsNodesAndMaterialsSlopeCompute.cpp\
+                                        ./modules/ModelProcessorx/SlopeCompute/CreateConstraintsSlopeCompute.cpp \
+                                        ./modules/ModelProcessorx/SlopeCompute/CreateLoadsSlopeCompute.cpp\
+                                        ./modules/ModelProcessorx/Control/CreateParametersControl.cpp\
+                                        ./modules/ModelProcessorx/Thermal/CreateElementsNodesAndMaterialsThermal.cpp\
+                                        ./modules/ModelProcessorx/Thermal/CreateConstraintsThermal.cpp\
+                                        ./modules/ModelProcessorx/Thermal/CreateLoadsThermal.cpp\
+                                        ./modules/ModelProcessorx/Melting/CreateElementsNodesAndMaterialsMelting.cpp\
+                                        ./modules/ModelProcessorx/Melting/CreateConstraintsMelting.cpp\
+                                        ./modules/ModelProcessorx/Melting/CreateLoadsMelting.cpp\
+                                        ./modules/ModelProcessorx/Prognostic/CreateElementsNodesAndMaterialsPrognostic.cpp\
+                                        ./modules/ModelProcessorx/Prognostic/CreateConstraintsPrognostic.cpp\
+                                        ./modules/ModelProcessorx/Prognostic/CreateLoadsPrognostic.cpp\
+                                        ./modules/ModelProcessorx/Prognostic2/CreateElementsNodesAndMaterialsPrognostic2.cpp\
+                                        ./modules/ModelProcessorx/Prognostic2/CreateConstraintsPrognostic2.cpp\
+                                        ./modules/ModelProcessorx/Prognostic2/CreateLoadsPrognostic2.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness/CreateElementsNodesAndMaterialsBalancedthickness.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness/CreateConstraintsBalancedthickness.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness/CreateLoadsBalancedthickness.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness2/CreateElementsNodesAndMaterialsBalancedthickness2.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness2/CreateConstraintsBalancedthickness2.cpp\
+                                        ./modules/ModelProcessorx/Balancedthickness2/CreateLoadsBalancedthickness2.cpp\
+                                        ./modules/ModelProcessorx/Balancedvelocities/CreateElementsNodesAndMaterialsBalancedvelocities.cpp\
+                                        ./modules/ModelProcessorx/Balancedvelocities/CreateConstraintsBalancedvelocities.cpp\
+                                        ./modules/ModelProcessorx/Balancedvelocities/CreateLoadsBalancedvelocities.cpp\
+                                        ./modules/ModelProcessorx/Qmu/CreateParametersQmu.cpp\
+                                        ./modules/Dofx/Dofx.h\
+                                        ./modules/Dofx/Dofx.cpp\
+                                        ./modules/Dux/Dux.h\
+                                        ./modules/Dux/Dux.cpp\
+                                        ./modules/ControlConstrainx/ControlConstrainx.h\
+                                        ./modules/ControlConstrainx/ControlConstrainx.cpp\
+                                        ./modules/SurfaceAreax/SurfaceAreax.h\
+                                        ./modules/SurfaceAreax/SurfaceAreax.cpp\
+                                        ./modules/Misfitx/Misfitx.h\
+                                        ./modules/Misfitx/Misfitx.cpp\
+                                        ./modules/CostFunctionx/CostFunctionx.h\
+                                        ./modules/CostFunctionx/CostFunctionx.cpp\
+                                        ./modules/Orthx/Orthx.h\
+                                        ./modules/Orthx/Orthx.cpp\
+                                        ./modules/Gradjx/Gradjx.h\
+                                        ./modules/Gradjx/Gradjx.cpp\
+                                        ./modules/SplitSolutionVectorx/SplitSolutionVectorx.h\
+                                        ./modules/SplitSolutionVectorx/SplitSolutionVectorx.cpp\
+                                        ./modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.h\
+                                        ./modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.cpp\
+                                        ./modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.h\
+                                        ./modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.cpp\
+                                        ./modules/GetSolutionFromInputsx/GetSolutionFromInputsx.h\
+                                        ./modules/GetSolutionFromInputsx/GetSolutionFromInputsx.cpp\
+                                        ./modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.h\
+                                        ./modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.cpp\
+                                        ./modules/UpdateGeometryx/UpdateGeometryx.h\
+                                        ./modules/UpdateGeometryx/UpdateGeometryx.cpp\
+                                        ./modules/UpdateVertexPositionsx/UpdateVertexPositionsx.h\
+                                        ./modules/UpdateVertexPositionsx/UpdateVertexPositionsx.cpp\
+                                        ./modules/ConfigureObjectsx/ConfigureObjectsx.h\
+                                        ./modules/ConfigureObjectsx/ConfigureObjectsx.cpp\
+                                        ./modules/ComputeBasalStressx/ComputeBasalStressx.h\
+                                        ./modules/ComputeBasalStressx/ComputeBasalStressx.cpp\
+                                        ./modules/ComputePressurex/ComputePressurex.h\
+                                        ./modules/ComputePressurex/ComputePressurex.cpp\
+                                        ./modules/ComputeStrainRatex/ComputeStrainRatex.h\
+                                        ./modules/ComputeStrainRatex/ComputeStrainRatex.cpp\
+                                        ./modules/BuildNodeSetsx/BuildNodeSetsx.h\
+                                        ./modules/BuildNodeSetsx/BuildNodeSetsx.cpp\
+                                        ./modules/BuildNodeSetsx/PartitionSets.cpp\
+                                        ./modules/SpcNodesx/SpcNodesx.h\
+                                        ./modules/SpcNodesx/SpcNodesx.cpp\
+                                        ./modules/MpcNodesx/MpcNodesx.h\
+                                        ./modules/MpcNodesx/MpcNodesx.cpp\
+                                        ./modules/InterpFromGridToMeshx/InterpFromGridToMeshx.cpp\
+                                        ./modules/InterpFromGridToMeshx/InterpFromGridToMeshx.h\
+                                        ./modules/InterpFromGridToMeshx/InterpFromGridToMeshxt.cpp\
+                                        ./modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp\
+                                        ./modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.h\
+                                        ./modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.cpp\
+                                        ./modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.h\
+                                        ./modules/InterpFromMeshToGridx/InterpFromMeshToGridx.cpp\
+                                        ./modules/InterpFromMeshToGridx/InterpFromMeshToGridx.h\
+                                        ./modules/HoleFillerx/HoleFillerx.cpp\
+                                        ./modules/HoleFillerx/HoleFillerx.h\
+                                        ./modules/AverageFilterx/AverageFilterx.cpp\
+                                        ./modules/AverageFilterx/AverageFilterx.h\
+                                        ./modules/MeshPartitionx/MeshPartitionx.cpp\
+                                        ./modules/MeshPartitionx/MeshPartitionx.h\
+                                        ./modules/ContourToMeshx/ContourToMeshx.cpp\
+                                        ./modules/ContourToMeshx/ContourToMeshxt.cpp\
+                                        ./modules/ContourToMeshx/ContourToMeshx.h\
+                                        ./modules/Reducevectorgtosx/Reducevectorgtosx.cpp\
+                                        ./modules/Reducevectorgtosx/Reducevectorgtosx.h\
+                                        ./modules/Reducevectorgtofx/Reducevectorgtofx.cpp\
+                                        ./modules/Reducevectorgtofx/Reducevectorgtofx.h\
+                                        ./modules/Reducematrixfromgtofx/Reducematrixfromgtofx.cpp\
+                                        ./modules/Reducematrixfromgtofx/Reducematrixfromgton.cpp\
+                                        ./modules/Reducematrixfromgtofx/Reducematrixfromgtofx.h\
+                                        ./modules/Reduceloadfromgtofx/Reduceloadfromgtofx.h\
+                                        ./modules/Reduceloadfromgtofx/Reduceloadfromgtofx.cpp\
+                                        ./modules/NormalizeConstraintsx/NormalizeConstraintsx.cpp\
+                                        ./modules/NormalizeConstraintsx/NormalizeConstraintsx.h\
+                                        ./modules/MassFluxx/MassFluxx.cpp\
+                                        ./modules/MassFluxx/MassFluxx.h\
+                                        ./modules/SystemMatricesx/SystemMatricesx.cpp\
+                                        ./modules/SystemMatricesx/SystemMatricesx.h\
+                                        ./modules/PenaltyConstraintsx/PenaltyConstraintsx.cpp\
+                                        ./modules/PenaltyConstraintsx/PenaltyConstraintsx.h\
+                                        ./modules/PenaltyConstraintsx/RiftConstraints.cpp\
+                                        ./modules/PenaltyConstraintsx/RiftConstraints.h\
+                                        ./modules/PenaltySystemMatricesx/PenaltySystemMatricesx.cpp\
+                                        ./modules/PenaltySystemMatricesx/PenaltySystemMatricesx.h\
+                                        ./modules/Solverx/Solverx.cpp\
+                                        ./modules/Solverx/Solverx.h\
+                                        ./modules/Mergesolutionfromftogx/Mergesolutionfromftogx.cpp\
+                                        ./modules/Mergesolutionfromftogx/Mergesolutionfromftogx.h\
+                                        ./modules/ProcessParamsx/ProcessParamsx.cpp\
+                                        ./modules/ProcessParamsx/ProcessParamsx.h\
+                                        ./modules/Qmux/Qmux.h\
+                                        ./modules/Qmux/Qmux.cpp\
+                                        ./modules/Qmux/DakotaResponses.cpp\
+                                        ./modules/Qmux/SpawnCore.cpp\
+                                        ./modules/Qmux/SpawnCoreParallel.cpp\
+                                        ./modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.cpp\
+                                        ./modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.h\
+                                        ./modules/FieldDepthAveragex/FieldDepthAveragex.cpp\
+                                        ./modules/FieldDepthAveragex/FieldDepthAveragex.h\
+                                        ./modules/DepthAverageInputx/DepthAverageInputx.cpp\
+                                        ./modules/DepthAverageInputx/DepthAverageInputx.h\
+                                        ./modules/FieldExtrudex/FieldExtrudex.cpp\
+                                        ./modules/FieldExtrudex/FieldExtrudex.h\
+                                        ./modules/InputToResultx/InputToResultx.cpp\
+                                        ./modules/InputToResultx/InputToResultx.h\
+                                        ./modules/ExtrudeInputx/ExtrudeInputx.cpp\
+                                        ./modules/ExtrudeInputx/ExtrudeInputx.h\
+                                        ./modules/OutputRiftsx/OutputRiftsx.h\
+                                        ./modules/OutputRiftsx/OutputRiftsx.cpp\
                                         ./solutions/diagnostic_core.cpp\
                                         ./solutions/diagnostic_core_linear.cpp\
 …
                                         ./solutions/steadystate_core.cpp\
                                         ./solutions/OutputResults.cpp\
+                                        ./Bamgx/Bamgx.cpp\
+                                        ./Bamgx/Bamgx.h\
+                                        ./Bamgx/include/include.h \
+                                        ./Bamgx/include/macros.h \
+                                        ./Bamgx/include/typedefs.h \
+                                        ./Bamgx/objects/BamgObjects.h \
+                                        ./Bamgx/objects/CrackedEdge.h\
+                                        ./Bamgx/objects/CrackedEdge.cpp\
+                                        ./Bamgx/objects/Curve.h\
+                                        ./Bamgx/objects/Curve.cpp\
+                                        ./Bamgx/objects/Direction.h\
+                                        ./Bamgx/objects/Direction.cpp\
+                                        ./Bamgx/objects/DoubleAndInt.h\
+                                        ./Bamgx/objects/Edge.h\
+                                        ./Bamgx/objects/Edge.cpp\
+                                        ./Bamgx/objects/GeometricalEdge.h\
+                                        ./Bamgx/objects/GeometricalEdge.cpp\
+                                        ./Bamgx/objects/GeometricalSubDomain.h\
+                                        ./Bamgx/objects/GeometricalSubDomain.cpp\
+                                        ./Bamgx/objects/GeometricalVertex.h\
+                                        ./Bamgx/objects/GeometricalVertex.cpp\
+                                        ./Bamgx/objects/Geometry.cpp\
+                                        ./Bamgx/objects/Geometry.h\
+                                        ./Bamgx/objects/ListofIntersectionTriangles.cpp\
+                                        ./Bamgx/objects/ListofIntersectionTriangles.h\
+                                        ./Bamgx/objects/MatVVP2x2.cpp\
+                                        ./Bamgx/objects/Metric.cpp\
+                                        ./Bamgx/objects/Metric.h\
+                                        ./Bamgx/objects/QuadTree.cpp\
+                                        ./Bamgx/objects/QuadTree.h\
+                                        ./Bamgx/objects/R2.h\
+                                        ./Bamgx/objects/SetOfE4.cpp\
+                                        ./Bamgx/objects/SetOfE4.h\
+                                        ./Bamgx/objects/SubDomain.h\
+                                        ./Bamgx/objects/SubDomain.cpp\
+                                        ./Bamgx/objects/TriangleAdjacent.h\
+                                        ./Bamgx/objects/TriangleAdjacent.cpp\
+                                        ./Bamgx/objects/Triangle.cpp\
+                                        ./Bamgx/objects/Triangle.h\
+                                        ./Bamgx/objects/Triangles.cpp\
+                                        ./Bamgx/objects/Triangles.h\
+                                        ./Bamgx/objects/MeshVertex.cpp\
+                                        ./Bamgx/objects/MeshVertex.h\
+                                        ./Bamgx/objects/VertexOnEdge.h\
+                                        ./Bamgx/objects/VertexOnEdge.cpp\
+                                        ./Bamgx/objects/VertexOnGeom.h\
+                                        ./Bamgx/objects/VertexOnGeom.cpp\
+                                        ./Bamgx/objects/VertexOnVertex.h\
+                                        ./Bamgx/objects/VertexOnVertex.cpp\
+                                        ./Bamgx/shared/Abs.h \
+                                        ./Bamgx/shared/BigPrimeNumber.h\
+                                        ./Bamgx/shared/BigPrimeNumber.cpp\
+                                        ./Bamgx/shared/BinaryRand.h \
+                                        ./Bamgx/shared/det.h \
+                                        ./Bamgx/shared/Exchange.h \
+                                        ./Bamgx/shared/extrema.h \
+                                        ./Bamgx/shared/HeapSort.h \
+                                        ./Bamgx/shared/Norm.h \
+                                        ./Bamgx/shared/OppositeAngle.h \
+                                        ./Bamgx/shared/shared.h\
+                                        ./BamgConvertMeshx/BamgConvertMeshx.cpp\
+                                        ./BamgConvertMeshx/BamgConvertMeshx.h
+                                        ./modules/Bamgx/Bamgx.cpp\
+                                        ./modules/Bamgx/Bamgx.h\
+                                        ./modules/BamgConvertMeshx/BamgConvertMeshx.cpp\
+                                        ./modules/BamgConvertMeshx/BamgConvertMeshx.h
 libpISSM_a_CXXFLAGS = -fPIC -D_PARALLEL_   -D_C_ $(CXXOPTFLAGS)

issm/trunk/src/c/include/macros.h

-              r3772
+              r3913
 #ifndef _MACROS_H_
 #define _MACROS_H_
+#include "./typedefs.h"
 #ifdef HAVE_CONFIG_H
 …
 #endif
 #endif

issm/trunk/src/c/modules/AverageFilterx/AverageFilterx.cpp

r3332	r3913
8	8	#include <time.h>
9	9	#include "./AverageFilterx.h"
10		#include "../shared/shared.h"
	10	#include "../../shared/shared.h"
11	11
12	12	int AverageFilterx(double** pimageout,double* image, int lines,int samps,int smooth){

issm/trunk/src/c/modules/BamgConvertMeshx/BamgConvertMeshx.cpp

-              r3775
+              r3913
 #include "./BamgConvertMeshx.h"
+#include "../shared/shared.h"
+#include "../include/include.h"
+#include "../toolkits/toolkits.h"
+#include "../Bamgx/objects/BamgObjects.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../objects/objects.h"
 using namespace bamg;

issm/trunk/src/c/modules/BamgConvertMeshx/BamgConvertMeshx.h

r3354	r3913
6	6	#define _BAMGCONVERTMESHX_H
7	7
8		#include "../objects/objects.h"
	8	#include "../../objects/objects.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/BuildNodeSetsx/BuildNodeSetsx.cpp

-              r3775
+              r3913
 #include "./BuildNodeSetsx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 int BuildNodeSetsx( NodeSets** pnodesets, DataSet* nodes){

issm/trunk/src/c/modules/BuildNodeSetsx/BuildNodeSetsx.h

-              r1
+              r3913
 #define _BUILDNODESETSX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/BuildNodeSetsx/PartitionSets.cpp

-              r3775
+              r3913
 #include "stdio.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
 void PartitionSets(Vec* ppartitionb, Vec* ppartitionc,Vec flags_a,Vec flags_b,Vec flags_c,int gsize){

issm/trunk/src/c/modules/ComputeBasalStressx/ComputeBasalStressx.cpp

-              r3775
+              r3913
 #include "./ComputeBasalStressx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void    ComputeBasalStressx( Vec* psigma,DataSet* elements,DataSet* nodes, DataSet* vertices,DataSet* loads, DataSet* materials,Parameters* parameters,

issm/trunk/src/c/modules/ComputeBasalStressx/ComputeBasalStressx.h

-              r3673
+              r3913
 #define _COMPUTEBASALSTRESSX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/ComputePressurex/ComputePressurex.cpp

-              r3848
+              r3913
 #include "./ComputePressurex.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void    ComputePressurex( Vec* pp_g,DataSet* elements,DataSet* nodes, DataSet* vertices,DataSet* loads, DataSet* materials,Parameters* parameters,

issm/trunk/src/c/modules/ComputePressurex/ComputePressurex.h

-              r3673
+              r3913
 #define _COMPUTEPRESSUREX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/ComputeStrainRatex/ComputeStrainRatex.cpp

-              r3775
+              r3913
 #include "./ComputeStrainRatex.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void    ComputeStrainRatex( Vec* peps,DataSet* elements,DataSet* nodes, DataSet* vertices,DataSet* loads, DataSet* materials,Parameters* parameters,

issm/trunk/src/c/modules/ComputeStrainRatex/ComputeStrainRatex.h

-              r3673
+              r3913
 #define _COMPUTESTRAINRATEX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/ConfigureObjectsx/ConfigureObjectsx.cpp

-              r3775
+              r3913
 #include "./ConfigureObjectsx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 int     ConfigureObjectsx( DataSet* elements, DataSet* loads, DataSet* nodes, DataSet* vertices, DataSet* materials,Parameters* parameters){

issm/trunk/src/c/modules/ConfigureObjectsx/ConfigureObjectsx.h

r3673	r3913
6	6	#define _CONFIGUREOBJECTSX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/ContourToMeshx/ContourToMeshx.h

-              r2591
+              r3913
 #define _CONTOURTOMESHX_H
 #include "../shared/shared.h"
 #include "../objects/objects.h"
+#include "../../shared/shared.h"
+#include "../../objects/objects.h"
 /*threading: */

issm/trunk/src/c/modules/ContourToNodesx/ContourToNodesx.h

-              r1105
+              r3913
 #define _CONTOURTONODESX_H
 #include "../shared/shared.h"
 #include "../objects/objects.h"
+#include "../../shared/shared.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/ControlConstrainx/ControlConstrainx.cpp

-              r3775
+              r3913
 #include "./ControlConstrainx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void ControlConstrainx( double* p_g, int numdofnodes, double cm_min, double cm_max,int control_type){

issm/trunk/src/c/modules/ControlConstrainx/ControlConstrainx.h

r3751	r3913
6	6	#define _CONTROLCONSTRAINX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/CostFunctionx/CostFunctionx.cpp

-              r3775
+              r3913
 #include "./CostFunctionx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../SurfaceAreax/SurfaceAreax.h"

issm/trunk/src/c/modules/CostFunctionx/CostFunctionx.h

-              r3673
+              r3913
 #define _COSTFUNCTIONX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/DepthAverageInputx/DepthAverageInputx.cpp

-              r3869
+              r3913
 #include "./DepthAverageInputx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void DepthAverageInputx( DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,int enum_type){

issm/trunk/src/c/modules/DepthAverageInputx/DepthAverageInputx.h

r3791	r3913
6	6	#define _DEPTHAVERAGEINPUTX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/Dofx/Dofx.cpp

-              r3775
+              r3913
 #include "./Dofx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 int Dofx( DofVec** ppartition, DofVec** ptpartition, DataSet* elements,DataSet* nodes, DataSet* vertices, Parameters* parameters) {

issm/trunk/src/c/modules/Dofx/Dofx.h

-              r3673
+              r3913
 #define _DOFX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/Dux/Dux.cpp

-              r3775
+              r3913
 #include "./Dux.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../SurfaceAreax/SurfaceAreax.h"

issm/trunk/src/c/modules/Dux/Dux.h

-              r3673
+              r3913
 #define _DUX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/ElementConnectivityx/ElementConnectivityx.cpp

-              r3775
+              r3913
 #include "./ElementConnectivityx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 int hascommondedge(double* element1,double* element2);

issm/trunk/src/c/modules/ExtrudeInputx/ExtrudeInputx.cpp

-              r3869
+              r3913
 #include "./ExtrudeInputx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void ExtrudeInputx( DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,int enum_type){

issm/trunk/src/c/modules/ExtrudeInputx/ExtrudeInputx.h

r3791	r3913
6	6	#define _EXTRUDEINPUTX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.cpp

-              r3869
+              r3913
 #include "./FieldAverageOntoVerticesx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void FieldAverageOntoVerticesx(Vec* pfield, DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters){

issm/trunk/src/c/modules/FieldAverageOntoVerticesx/FieldAverageOntoVerticesx.h

r3673	r3913
6	6	#define _FIELDAVERAGEVERTICESX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/FieldDepthAveragex/FieldDepthAveragex.cpp

-              r3775
+              r3913
 #include "./FieldDepthAveragex.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void FieldDepthAveragex( Vec field, DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,char* fieldname){

issm/trunk/src/c/modules/FieldDepthAveragex/FieldDepthAveragex.h

r3673	r3913
6	6	#define _FIELDDEPTHAVERAGEX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/FieldExtrudex/FieldExtrudex.cpp

-              r3775
+              r3913
 #include "./FieldExtrudex.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void FieldExtrudex( Vec field, DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,char* field_name,int collapse){

issm/trunk/src/c/modules/FieldExtrudex/FieldExtrudex.h

r3673	r3913
6	6	#define _FIELDEXTRUDEX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/GetSolutionFromInputsx/GetSolutionFromInputsx.cpp

-              r3821
+              r3913
 #include "./GetSolutionFromInputsx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void    GetSolutionFromInputsx( Vec* psolution, DataSet* elements,DataSet* nodes, DataSet* vertices,DataSet* loads, DataSet* materials,  Parameters* parameters, int analysis_type, int sub_analysis_type){

issm/trunk/src/c/modules/GetSolutionFromInputsx/GetSolutionFromInputsx.h

-              r3821
+              r3913
 #define _GETSOLUTIONFROMINPUTSXX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/Gradjx/Gradjx.cpp

-              r3887
+              r3913
 #include "./Gradjx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void Gradjx( Vec* pgrad_g, int numberofnodes, DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,

issm/trunk/src/c/modules/Gradjx/Gradjx.h

-              r3887
+              r3913
 #define _GRADJX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/HoleFillerx/HoleFillerx.cpp

r3595	r3913
8	8	#include <time.h>
9	9	#include "./HoleFillerx.h"
10		#include "../shared/shared.h"
	10	#include "../../shared/shared.h"
11	11
12	12	int HoleFillerx(double** pimageout,double* image, int lines,int samps,int smooth){

issm/trunk/src/c/modules/InputToResultx/InputToResultx.cpp

-              r3901
+              r3913
 #include "./InputToResultx.h"
 #include "../shared/shared.h"
 #include "../objects/objects.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../objects/objects.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void InputToResultx(Result** presult,DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials,Parameters* parameters,int enum_type,int id, double time, int step){

issm/trunk/src/c/modules/InputToResultx/InputToResultx.h

r3807	r3913
6	6	#define _INPUTTORESULTX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/InterpFromGridToMeshx/InterpFromGridToMeshx.cpp

-              r3775
+              r3913
 #include "./InterpFromGridToMeshx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
 int InterpFromGridToMeshx( Vec* pdata_mesh,double* x_in, int x_rows, double* y_in, int y_rows, double* data, int M, int N, double* x_mesh, double* y_mesh, int nods,double default_value) {

issm/trunk/src/c/modules/InterpFromGridToMeshx/InterpFromGridToMeshx.h

r2549	r3913
6	6	#define _INTERPFROMGRIDTOMESHX_H
7	7
8		#include "../toolkits/toolkits.h"
	8	#include "../../toolkits/toolkits.h"
9	9
10	10

issm/trunk/src/c/modules/InterpFromGridToMeshx/InterpFromGridToMeshxt.cpp

r3332	r3913
4	4
5	5	#include "./InterpFromGridToMeshx.h"
6		#include "../shared/shared.h"
	6	#include "../../shared/shared.h"
7	7
8	8	void* InterpFromGridToMeshxt(void* vpthread_handle){

issm/trunk/src/c/modules/InterpFromMeshToGridx/InterpFromMeshToGridx.cpp

-              r3775
+              r3913
 #include "./InterpFromMeshToGridx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
 void InterpFromMeshToGridx(double** px_m,double** py_m,double** pgriddata,double* index_mesh, double* x_mesh, double* y_mesh, int nods,int nels, double* data_mesh, int data_length, double cornereast,double cornernorth,double xposting,double yposting,int nlines,int ncols,double default_value) {

issm/trunk/src/c/modules/InterpFromMeshToGridx/InterpFromMeshToGridx.h

r2294	r3913
6	6	#define _INTERPFROMMESHTOGRIDX_H
7	7
8		#include "../toolkits/toolkits.h"
	8	#include "../../toolkits/toolkits.h"
9	9
10	10	void InterpFromMeshToGridx(double px_m,double py_m,double** pgriddata,double* index_mesh, double* x_mesh, double* y_mesh, int nods,int nels, double* data_mesh, int data_length, double cornereast,double cornernorth,double xposting,double yposting,int nlines,int ncols,double default_value);

issm/trunk/src/c/modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp

-              r3775
+              r3913
 #include "./InterpFromMeshToMesh2dx.h"
+#include "../shared/shared.h"
+#include "../include/include.h"
+#include "../toolkits/toolkits.h"
+#include "../Bamgx/objects/BamgObjects.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../objects/objects.h"
 using namespace bamg;

issm/trunk/src/c/modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.h

r3126	r3913
6	6	#define _INTERPFROMMESHTOMESH2DX_H
7	7
8		#include "../objects/objects.h"
	8	#include "../../objects/objects.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.cpp

-              r3775
+              r3913
 #include "./InterpFromMeshToMesh3dx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
 int InterpFromMeshToMesh3dx( Vec* pdata_prime,double* index_data, double* x_data, double* y_data, double* z_data, int nods_data,int nels_data, double* data, int data_length, double* x_prime, double* y_prime, double* z_prime, int nods_prime,double default_value) {

issm/trunk/src/c/modules/InterpFromMeshToMesh3dx/InterpFromMeshToMesh3dx.h

r2292	r3913
6	6	#define _INTERPFROMMESHTOMESH3DX_H
7	7
8		#include "../toolkits/toolkits.h"
	8	#include "../../toolkits/toolkits.h"
9	9
10	10	int InterpFromMeshToMesh3dx( Vec* pdata_prime,double* index_data, double* x_data, double* y_data, double* z_data, int nods_data,int nels_data, double* data, int data_length, double* x_prime, double* y_prime, double* z_prime, int nods_prime,double default_value);

issm/trunk/src/c/modules/MassFluxx/MassFluxx.cpp

-              r3851
+              r3913
 #include "./MassFluxx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void MassFluxx(double* pmass_flux, DataSet* elements,DataSet* nodes, DataSet* vertices,DataSet* loads,DataSet* materials,Parameters* parameters,  double* segments,int num_segments,double* ug){

issm/trunk/src/c/modules/MassFluxx/MassFluxx.h

-              r3673
+              r3913
 #define _MASSFLUXX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/Mergesolutionfromftogx/Mergesolutionfromftogx.h

r1	r3913
6	6	#define _MERGESOLUTIONFROMFTOGX_H
7	7
8		#include "../objects/objects.h"
	8	#include "../../objects/objects.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/MeshPartitionx/MeshPartitionx.cpp

-              r3865
+              r3913
 #include "./MeshPartitionx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 int MeshPartitionx(int** pepart, int** pnpart, int numberofelements,int numberofgrids,double* elements,

issm/trunk/src/c/modules/Misfitx/Misfitx.cpp

-              r3775
+              r3913
 #include "./Misfitx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../SurfaceAreax/SurfaceAreax.h"

issm/trunk/src/c/modules/Misfitx/Misfitx.h

-              r3673
+              r3913
 #define _MISFITX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/ModelProcessorx/Balancedthickness/CreateConstraintsBalancedthickness.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedthickness/CreateElementsNodesAndMaterialsBalancedthickness.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedthickness/CreateLoadsBalancedthickness.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedthickness2/CreateConstraintsBalancedthickness2.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../io/io.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../io/io.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedthickness2/CreateElementsNodesAndMaterialsBalancedthickness2.cpp

-              r3784
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedthickness2/CreateLoadsBalancedthickness2.cpp

-              r3784
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedvelocities/CreateConstraintsBalancedvelocities.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedvelocities/CreateElementsNodesAndMaterialsBalancedvelocities.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../../include/include.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Balancedvelocities/CreateLoadsBalancedvelocities.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Control/CreateParametersControl.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/CreateDataSets.cpp

-              r3775
+              r3913
 #endif
 #include "../objects/objects.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "./ModelProcessorx/ModelProcessorx.h"
+#include "../../objects/objects.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "./ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/CreateParameters.cpp

-              r3779
+              r3913
  */
 #include "../DataSet/DataSet.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../objects/objects.h"
 #include "../shared/shared.h"
+#include "../../DataSet/DataSet.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../objects/objects.h"
+#include "../../shared/shared.h"
 #include "../MeshPartitionx/MeshPartitionx.h"
 #include "../io/io.h"
+#include "../../io/io.h"
 void CreateParameters(Parameters** pparameters,IoModel* iomodel,ConstDataHandle iomodel_handle){

issm/trunk/src/c/modules/ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp

-              r3872
+              r3913
 #endif
 #include "../shared/shared.h"
 #include "../io/io.h"
 #include "../include/include.h"
+#include "../../shared/shared.h"
+#include "../../io/io.h"
+#include "../../include/include.h"
 #include "./ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticHoriz/CreateConstraintsDiagnosticHoriz.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticHoriz/CreateElementsNodesAndMaterialsDiagnosticHoriz.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../../include/include.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticHoriz/CreateLoadsDiagnosticHoriz.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticHutter/CreateConstraintsDiagnosticHutter.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticHutter/CreateElementsNodesAndMaterialsDiagnosticHutter.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../../include/include.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticHutter/CreateLoadsDiagnosticHutter.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticStokes/CreateConstraintsDiagnosticStokes.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticStokes/CreateElementsNodesAndMaterialsDiagnosticStokes.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticStokes/CreateLoadsDiagnosticStokes.cpp

-              r3809
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticVert/CreateConstraintsDiagnosticVert.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticVert/CreateElementsNodesAndMaterialsDiagnosticVert.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../../include/include.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/DiagnosticVert/CreateLoadsDiagnosticVert.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Melting/CreateConstraintsMelting.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Melting/CreateElementsNodesAndMaterialsMelting.cpp

-              r3878
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../include/include.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../include/include.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Melting/CreateLoadsMelting.cpp

-              r3845
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/ModelProcessorx.h

r3713	r3913
11	11	class IoModel;
12	12	class Parameters;
13		#include "../io/io.h"
	13	#include "../../io/io.h"
14	14
15	15

issm/trunk/src/c/modules/ModelProcessorx/Partitioning.cpp

-              r3784
+              r3913
 #include <string.h>
 #include "../objects/objects.h"
 #include "../shared/shared.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../io/io.h"
 #include "../include/include.h"
+#include "../../objects/objects.h"
+#include "../../shared/shared.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../io/io.h"
+#include "../../include/include.h"
 #include "../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx/ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Prognostic/CreateConstraintsPrognostic.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../io/io.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../io/io.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Prognostic/CreateElementsNodesAndMaterialsPrognostic.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../io/io.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../io/io.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../../include/include.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Prognostic/CreateLoadsPrognostic.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Prognostic2/CreateConstraintsPrognostic2.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Prognostic2/CreateElementsNodesAndMaterialsPrognostic2.cpp

-              r3886
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../io/io.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../io/io.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Prognostic2/CreateLoadsPrognostic2.cpp

-              r3784
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../io/io.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../io/io.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Prognostic2/CreateParametersPrognostic2.cpp

-              r3703
+              r3913
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Qmu/CreateParametersQmu.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../io/io.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../io/io.h"
+#include "../../../include/include.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/SlopeCompute/CreateConstraintsSlopeCompute.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/SlopeCompute/CreateElementsNodesAndMaterialsSlopeCompute.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/SlopeCompute/CreateLoadsSlopeCompute.cpp

-              r3775
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Thermal/CreateConstraintsThermal.cpp

-              r3703
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../io/io.h"
 #include "../../toolkits/toolkits.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../io/io.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Thermal/CreateElementsNodesAndMaterialsThermal.cpp

-              r3811
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../include/include.h"
 #include "../../shared/shared.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../include/include.h"
+#include "../../../shared/shared.h"
 #include "../../MeshPartitionx/MeshPartitionx.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/ModelProcessorx/Thermal/CreateLoadsThermal.cpp

-              r3804
+              r3913
  */
 #include "../../DataSet/DataSet.h"
 #include "../../toolkits/toolkits.h"
 #include "../../io/io.h"
 #include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../../objects/objects.h"
 #include "../../shared/shared.h"
 #include "../../include/include.h"
+#include "../../../DataSet/DataSet.h"
+#include "../../../toolkits/toolkits.h"
+#include "../../../io/io.h"
+#include "../../../EnumDefinitions/EnumDefinitions.h"
+#include "../../../objects/objects.h"
+#include "../../../shared/shared.h"
+#include "../../../include/include.h"
 #include "../ModelProcessorx.h"

issm/trunk/src/c/modules/MpcNodesx/MpcNodesx.cpp

-              r3775
+              r3913
 #include "./MpcNodesx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 int MpcNodesx( Mat* pRmg, DataSet* nodes,DataSet* constraints){

issm/trunk/src/c/modules/MpcNodesx/MpcNodesx.h

-              r1
+              r3913
 #define _MPCNODESX_H
 #include "../DataSet/DataSet.h"
 #include "../toolkits/toolkits.h"
+#include "../../DataSet/DataSet.h"
+#include "../../toolkits/toolkits.h"
 /* local prototypes: */

issm/trunk/src/c/modules/NodeConnectivityx/NodeConnectivityx.cpp

-              r3775
+              r3913
 #include "./NodeConnectivityx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void    NodeConnectivityx( double** pconnectivity, int* pwidth, double* elements, int nel, int nods){

issm/trunk/src/c/modules/NormalizeConstraintsx/NormalizeConstraintsx.cpp

r3332	r3913
5	5	#include "./NormalizeConstraintsx.h"
6	6
7		#include "../shared/shared.h"
	7	#include "../../shared/shared.h"
8	8
9	9	void NormalizeConstraintsx( Mat* pGmn, Mat Rmg, NodeSets* nodesets){

issm/trunk/src/c/modules/NormalizeConstraintsx/NormalizeConstraintsx.h

r1	r3913
6	6	#define _NORMALIZECONSTRAINTSX_H_
7	7
8		#include "../objects/objects.h"
	8	#include "../../objects/objects.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/Orthx/Orthx.h

-              r3775
+              r3913
 #define _ORTHX_H
 #include "../objects/objects.h"
 #include "../include/include.h"
 #include "../shared/shared.h"
+#include "../../objects/objects.h"
+#include "../../include/include.h"
+#include "../../shared/shared.h"
 /* local prototypes: */

issm/trunk/src/c/modules/OutputRiftsx/OutputRiftsx.cpp

-              r3775
+              r3913
 #include "./OutputRiftsx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void OutputRiftsx( Vec* priftproperties, DataSet* loads, int numrifts){

issm/trunk/src/c/modules/OutputRiftsx/OutputRiftsx.h

r1805	r3913
6	6	#define _OUTPUTRIFTSX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/PenaltyConstraintsx/PenaltyConstraintsx.cpp

-              r3889
+              r3913
 #include "./PenaltyConstraintsx.h"
 #include "./RiftConstraints.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void PenaltyConstraintsx(int* pconverged, int* pnum_unstable_constraints, DataSet* elements,DataSet* nodes, DataSet* vertices,

issm/trunk/src/c/modules/PenaltyConstraintsx/PenaltyConstraintsx.h

-              r3673
+              r3913
 #define _PENALTYCONSTRAINTSX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/PenaltyConstraintsx/RiftConstraints.cpp

-              r3775
+              r3913
 #include "./RiftConstraints.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../include/include.h"
 #include "../shared/shared.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../include/include.h"
+#include "../../shared/shared.h"
 #define _ZIGZAGCOUNTER_

issm/trunk/src/c/modules/PenaltyConstraintsx/RiftConstraints.h

-              r3673
+              r3913
 #define _RIFTCONSTRAINTS_H_
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 int RiftConstraints(int* pconverged, int* pnum_unstable_constraints,DataSet* loads,int min_mechanical_constraints,int analysis_type,int sub_analysis_type);

issm/trunk/src/c/modules/PenaltySystemMatricesx/PenaltySystemMatricesx.cpp

-              r3775
+              r3913
 #include "./PenaltySystemMatricesx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void PenaltySystemMatricesx(Mat Kgg, Vec pg,double* pkmax,DataSet* elements,DataSet* nodes, DataSet* vertices,DataSet* loads,DataSet* materials, Parameters* parameters,

issm/trunk/src/c/modules/PenaltySystemMatricesx/PenaltySystemMatricesx.h

-              r3673
+              r3913
 #define _PENALTYSYSTEMMATRICESX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/ProcessParamsx/ProcessParamsx.cpp

-              r3775
+              r3913
 #include "./ProcessParamsx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../DataSet/DataSet.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../DataSet/DataSet.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void ProcessParamsx( Parameters* parameters, Vec  part){

issm/trunk/src/c/modules/ProcessParamsx/ProcessParamsx.h

r3673	r3913
6	6	#define _PROCESSPARAMSX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.cpp

-              r3775
+              r3913
 #include "./PropagateFlagsFromConnectivityx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
 void RecursivePropagation(double* pool, double* connectivity,int index, double* flags);

issm/trunk/src/c/modules/PropagateFlagsFromConnectivityx/PropagateFlagsFromConnectivityx.h

r2888	r3913
5	5	#define _PROPAGATEFLAGSFROMCONNECTIVITYX_H
6	6
7		#include "../DataSet/DataSet.h"
	7	#include "../../DataSet/DataSet.h"
8	8
9	9	/* local prototypes: */

issm/trunk/src/c/modules/Qmux/DakotaResponses.cpp

-              r3775
+              r3913
 #endif
 #include "../DataSet/DataSet.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../DataSet/DataSet.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 #include "../MassFluxx/MassFluxx.h"
 #include "../Misfitx/Misfitx.h"

issm/trunk/src/c/modules/Qmux/Qmux.cpp

-              r3775
+              r3913
 #include "./Qmux.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../objects/DakotaPlugin.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../objects/DakotaPlugin.h"
 #ifdef _HAVE_DAKOTA_ //only works if dakota library has been compiled in.

issm/trunk/src/c/modules/Qmux/Qmux.h

-              r3673
+              r3913
 #define _QMUX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/Qmux/SpawnCore.cpp

-              r3775
+              r3913
 #include "../objects/objects.h"
 #include "../io/io.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../shared/shared.h"
+#include "../../objects/objects.h"
+#include "../../io/io.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
 #include "./Qmux.h"
 #include "../include/include.h"
+#include "../../include/include.h"
 int SpawnCore(double* responses, int numresponses, double* variables, char** variables_descriptors,int numvariables, void* model,int analysis_type,int sub_analysis_type,int counter){

issm/trunk/src/c/modules/Qmux/SpawnCoreParallel.cpp

-              r3906
+              r3913
 #include "../objects/objects.h"
 #include "../io/io.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../shared/shared.h"
+#include "../../objects/objects.h"
+#include "../../io/io.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
 #include "./Qmux.h"
 #include "../include/include.h"
 #include "../solutions/solutions.h"
+#include "../../include/include.h"
+#include "../../solutions/solutions.h"
 void SpawnCoreParallel(double* responses, int numresponses, double* variables, char** variables_descriptors,int numvariables, Model* model,int analysis_type,int sub_analysis_type,int counter){

issm/trunk/src/c/modules/Qmux/SpawnCoreSerial.cpp

-              r3775
+              r3913
 #include "../objects/objects.h"
 #include "../io/io.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../shared/shared.h"
+#include "../../objects/objects.h"
+#include "../../io/io.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
 #include "./Qmux.h"
 #include "../include/include.h"
+#include "../../include/include.h"
 void SpawnCoreSerial(double* responses, int numresponses, double* variables, char** variables_descriptors,int numvariables, mxArray* model,int analysis_type,int sub_analysis_type,int counter){

issm/trunk/src/c/modules/Reduceloadfromgtofx/Reduceloadfromgtofx.h

r1	r3913
6	6	#define _REDUCELOADFROMGTOFX_H
7	7
8		#include "../objects/objects.h"
	8	#include "../../objects/objects.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/modules/Reducematrixfromgtofx/Reducematrixfromgtofx.h

r1	r3913
7	7	#define _REDUCEMATRIXFROMGTOFX_H
8	8
9		#include "../objects/objects.h"
	9	#include "../../objects/objects.h"
10	10
11	11	/* local prototypes: */

issm/trunk/src/c/modules/Reducematrixfromgtofx/Reducematrixfromgton.cpp

r3332	r3913
9	9	#endif
10	10
11		#include "../toolkits/toolkits.h"
	11	#include "../../toolkits/toolkits.h"
12	12
13	13	void Reducematrixfromgton(Mat* pKnn,Mat Kgg,Mat Gmn,double* pv_m,int msize, double* pv_n,int nsize,int flag){

issm/trunk/src/c/modules/Reducevectorgtofx/Reducevectorgtofx.h

r1665	r3913
7	7	#define _REDUCEVECTORGTOFX_H
8	8
9		#include "../objects/objects.h"
	9	#include "../../objects/objects.h"
10	10
11	11	/* local prototypes: */

issm/trunk/src/c/modules/Reducevectorgtosx/Reducevectorgtosx.h

r1	r3913
7	7	#define _REDUCEVECTORGTOSX_H
8	8
9		#include "../objects/objects.h"
	9	#include "../../objects/objects.h"
10	10
11	11	/* local prototypes: */

issm/trunk/src/c/modules/Solverx/Solverx.cpp

-              r3775
+              r3913
 #include "./Solverx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
 #ifdef HAVE_CONFIG_H

issm/trunk/src/c/modules/Solverx/Solverx.h

r1	r3913
6	6	#define _SOLVERX_H
7	7
8		#include "../objects/objects.h"
	8	#include "../../objects/objects.h"
9	9
10	10

issm/trunk/src/c/modules/SpcNodesx/SpcNodesx.cpp

-              r3775
+              r3913
 #include "./SpcNodesx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void SpcNodesx( DofVec** pyg, DataSet* nodes,DataSet* constraints){

issm/trunk/src/c/modules/SpcNodesx/SpcNodesx.h

-              r3446
+              r3913
 #define _SPCNODESX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
 #include "../toolkits/toolkits.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../toolkits/toolkits.h"
 /* local prototypes: */

issm/trunk/src/c/modules/SplitSolutionVectorx/SplitSolutionVectorx.cpp

r3775	r3913
3	3
4	4	#include "./SplitSolutionVectorx.h"
5		#include "../shared/shared.h"
	5	#include "../../shared/shared.h"
6	6
7	7	void SplitSolutionVectorx(Vec u_g,int numberofnodes,int numberofdofs, ...){

issm/trunk/src/c/modules/SplitSolutionVectorx/SplitSolutionVectorx.h

r3775	r3913
12	12
13	13	#include <stdarg.h>
14		#include "../toolkits/toolkits.h"
	14	#include "../../toolkits/toolkits.h"
15	15
16	16	void SplitSolutionVectorx(Vec u_g,int numberofnodes,int numberofdofs, ...);

issm/trunk/src/c/modules/SurfaceAreax/SurfaceAreax.cpp

-              r3775
+              r3913
 #include "./SurfaceAreax.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void SurfaceAreax( double* pS, DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials,Parameters* parameters,

issm/trunk/src/c/modules/SurfaceAreax/SurfaceAreax.h

-              r3673
+              r3913
 #define _SURFACEAREAX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/SystemMatricesx/SystemMatricesx.cpp

-              r3879
+              r3913
 #include "./SystemMatricesx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void SystemMatricesx(Mat* pKgg, Vec* ppg,DataSet* elements,DataSet* nodes, DataSet* vertices,DataSet* loads,DataSet* materials, Parameters* parameters,

issm/trunk/src/c/modules/SystemMatricesx/SystemMatricesx.h

-              r3879
+              r3913
 #define _SYSTEMMATRICESX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/UpdateGeometryx/UpdateGeometryx.cpp

-              r3775
+              r3913
 #include "./UpdateGeometryx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../DataSet/DataSet.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
+#include "../../DataSet/DataSet.h"
 void UpdateGeometryx(Vec* poutthickness,Vec* poutbed,Vec* poutsurface,

issm/trunk/src/c/modules/UpdateGeometryx/UpdateGeometryx.h

-              r3673
+              r3913
 #define _UPDATEGEOMETRYX_H
 #include "../DataSet/DataSet.h"
 #include "../objects/objects.h"
+#include "../../DataSet/DataSet.h"
+#include "../../objects/objects.h"
 /* local prototypes: */

issm/trunk/src/c/modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.cpp

-              r3890
+              r3913
 #include "./UpdateInputsFromConstantx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void UpdateInputsFromConstantx( DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,double constant, int name){

issm/trunk/src/c/modules/UpdateInputsFromConstantx/UpdateInputsFromConstantx.h

-              r3890
+              r3913
 #define _UPDATEINPUTSFROMCONSTANTXX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.cpp

-              r3775
+              r3913
 #include "./UpdateInputsFromSolutionx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void UpdateInputsFromSolutionx( DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,Vec solution, int analysis_type, int sub_analysis_type){

issm/trunk/src/c/modules/UpdateInputsFromSolutionx/UpdateInputsFromSolutionx.h

-              r3715
+              r3913
 #define _UPDATEINPUTSFROMSOLUTIONXX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.cpp

-              r3775
+              r3913
 #include "./UpdateInputsFromVectorx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void UpdateInputsFromVectorx( DataSet* elements,DataSet* nodes, DataSet* vertices, DataSet* loads, DataSet* materials, Parameters* parameters,Vec vector, int NameEnum, int TypeEnum){

issm/trunk/src/c/modules/UpdateInputsFromVectorx/UpdateInputsFromVectorx.h

-              r3751
+              r3913
 #define _UPDATEINPUTSFROMVECTORXX_H
 #include "../objects/objects.h"
 #include "../DataSet/DataSet.h"
+#include "../../objects/objects.h"
+#include "../../DataSet/DataSet.h"
 /* local prototypes: */

issm/trunk/src/c/modules/UpdateVertexPositionsx/UpdateVertexPositionsx.cpp

-              r3775
+              r3913
 #include "./UpdateVertexPositionsx.h"
 #include "../shared/shared.h"
 #include "../include/include.h"
 #include "../toolkits/toolkits.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
+#include "../../shared/shared.h"
+#include "../../include/include.h"
+#include "../../toolkits/toolkits.h"
+#include "../../EnumDefinitions/EnumDefinitions.h"
 void UpdateVertexPositionsx( DataSet* vertices, Vec thickness,Vec bed){

issm/trunk/src/c/modules/UpdateVertexPositionsx/UpdateVertexPositionsx.h

r3612	r3913
6	6	#define _UPDATEVERTEXPOSITIONSXX_H
7	7
8		#include "../DataSet/DataSet.h"
	8	#include "../../DataSet/DataSet.h"
9	9
10	10	/* local prototypes: */

issm/trunk/src/c/objects/DakotaPlugin.cpp

r3775	r3913
26	26	#include "../include/include.h"
27	27	#include "../objects/objects.h"
28		#include "../Qmux/Qmux.h"
	28	#include "../modules/Qmux/Qmux.h"
29	29
30	30	/Standard includes: /

issm/trunk/src/c/objects/Loads/Riftfront.cpp

r3784	r3913
16	16	#include "../../shared/shared.h"
17	17	#include "../../include/include.h"
18		#include "../../ModelProcessorx/ModelProcessorx.h"
	18	#include "../../modules/ModelProcessorx/ModelProcessorx.h"
19	19	#include "../objects.h"
20	20	/}}}/

issm/trunk/src/c/objects/Model.cpp

-              r3859
+              r3913
 #include "stdio.h"
 #include "../DataSet/DataSet.h"
 #include "../ModelProcessorx/ModelProcessorx.h"
+#include "../modules/ModelProcessorx/ModelProcessorx.h"
 #include "./objects.h"
 #include "../include/include.h"
 #include "../EnumDefinitions/EnumDefinitions.h"
 #include "../modules.h"
+#include "../modules/modules.h"

issm/trunk/src/c/objects/objects.h

-              r3833
+              r3913
 /*Bamg: */
+#include "./Bamg/BamgOpts.h"
 #include "./Bamg/BamgGeom.h"
 #include "./Bamg/BamgMesh.h"
+#include "./Bamg/BamgOpts.h"
+#include "./Bamg/Metric.h"
+#include "./Bamg/DoubleAndInt.h"
+#include "./Bamg/Direction.h"
+#include "./Bamg/MeshVertex.h"
+#include "./Bamg/TriangleAdjacent.h"
+#include "./Bamg/Edge.h"
+#include "./Bamg/GeometricalVertex.h"
+#include "./Bamg/GeometricalEdge.h"
+#include "./Bamg/Curve.h"
+#include "./Bamg/Triangle.h"
+#include "./Bamg/ListofIntersectionTriangles.h"
+#include "./Bamg/GeometricalSubDomain.h"
+#include "./Bamg/SubDomain.h"
+#include "./Bamg/VertexOnGeom.h"
+#include "./Bamg/VertexOnVertex.h"
+#include "./Bamg/VertexOnEdge.h"
+#include "./Bamg/CrackedEdge.h"
+#include "./Bamg/Triangles.h"
+#include "./Bamg/Geometry.h"
+#include "./Bamg/QuadTree.h"
+#include "./Bamg/SetOfE4.h"
 #endif

issm/trunk/src/c/shared/shared.h

r2417	r3913
19	19	#include "String/sharedstring.h" //to avoid confusion with <string.h> standard header file
20	20	#include "Threads/issm_threads.h"
	21	#include "Bamg/shared.h"
21	22
22	23

issm/trunk/src/c/solutions/ControlInitialization.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	void ControlInitialization(Model* model){

issm/trunk/src/c/solutions/ControlRestart.cpp

r3895	r3913
5	5
6	6	#include "./solutions.h"
7		#include "../modules.h"
	7	#include "../modules/modules.h"
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9

issm/trunk/src/c/solutions/balancedthickness.cpp

r3895	r3913
13	13	#include "../EnumDefinitions/EnumDefinitions.h"
14	14	#include "../include/include.h"
15		#include "../modules.h"
	15	#include "../modules/modules.h"
16	16	#include "./solutions.h"
17	17

issm/trunk/src/c/solutions/balancedthickness2.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/balancedthickness2_core.cpp

r3895	r3913
9	9	#include "../EnumDefinitions/EnumDefinitions.h"
10	10	#include "./solutions.h"
11		#include "../modules.h"
	11	#include "../modules/modules.h"
12	12
13	13	DataSet* balancedthickness2_core(Model* model){

issm/trunk/src/c/solutions/balancedthickness_core.cpp

r3895	r3913
9	9	#include "../EnumDefinitions/EnumDefinitions.h"
10	10	#include "./solutions.h"
11		#include "../modules.h"
	11	#include "../modules/modules.h"
12	12
13	13	DataSet* balancedthickness_core(Model* model){

issm/trunk/src/c/solutions/balancedvelocities.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/balancedvelocities_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* balancedvelocities_core(Model* model){

issm/trunk/src/c/solutions/control_core.cpp

r3895	r3913
4	4
5	5	#include "./solutions.h"
6		#include "../modules.h"
	6	#include "../modules/modules.h"
7	7	#include "../EnumDefinitions/EnumDefinitions.h"
8	8

issm/trunk/src/c/solutions/convergence.cpp

r3820	r3913
4	4
5	5	#include "../objects/objects.h"
6		#include "../modules.h"
	6	#include "../modules/modules.h"
7	7	#include "../EnumDefinitions/EnumDefinitions.h"
8	8

issm/trunk/src/c/solutions/diagnostic.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/diagnostic_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11	#include "../include/include.h"
12	12

issm/trunk/src/c/solutions/diagnostic_core_linear.cpp

r3889	r3913
6	6	#include "../objects/objects.h"
7	7	#include "../EnumDefinitions/EnumDefinitions.h"
8		#include "../modules.h"
	8	#include "../modules/modules.h"
9	9
10	10	void diagnostic_core_linear(Vec* pug,FemModel* fem,int analysis_type,int sub_analysis_type){

issm/trunk/src/c/solutions/diagnostic_core_nonlinear.cpp

r3895	r3913
6	6	#include "../objects/objects.h"
7	7	#include "../EnumDefinitions/EnumDefinitions.h"
8		#include "../modules.h"
	8	#include "../modules/modules.h"
9	9	#include "./solutions.h"
10	10

issm/trunk/src/c/solutions/gradjcompute_core.cpp

r3895	r3913
3	3	*/
4	4
5		#include "../modules.h"
	5	#include "../modules/modules.h"
6	6	#include "./solutions.h"
7	7	#include "../EnumDefinitions/EnumDefinitions.h"

issm/trunk/src/c/solutions/objectivefunctionC.cpp

r3895	r3913
3	3	*/
4	4
5		#include "../modules.h"
	5	#include "../modules/modules.h"
6	6	#include "./solutions.h"
7	7	#include "../EnumDefinitions/EnumDefinitions.h"

issm/trunk/src/c/solutions/prognostic.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/prognostic2.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/prognostic2_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* prognostic2_core(Model* model){

issm/trunk/src/c/solutions/prognostic_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* prognostic_core(Model* model){

issm/trunk/src/c/solutions/slope_core.cpp

r3895	r3913
7	7	#include "../objects/objects.h"
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9		#include "../modules.h"
	9	#include "../modules/modules.h"
10	10
11	11	void slope_core(Vec* pslopex,Vec* pslopey,FemModel* fem, int AnalysisEnum){

issm/trunk/src/c/solutions/slopecompute_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* slopecompute_core(Model* model){

issm/trunk/src/c/solutions/steadystate.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/steadystate_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* steadystate_core(Model* model){

issm/trunk/src/c/solutions/thermal.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/thermal_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* thermal_core(Model* model){

issm/trunk/src/c/solutions/thermal_core_nonlinear.cpp

r3879	r3913
6	6	#include "../objects/objects.h"
7	7	#include "../EnumDefinitions/EnumDefinitions.h"
8		#include "../modules.h"
	8	#include "../modules/modules.h"
9	9
10	10	void thermal_core_nonlinear(Vec* ptg,double* pmelting_offset,FemModel* fem,int analysis_type,int sub_analysis_type){

issm/trunk/src/c/solutions/transient.cpp

r3895	r3913
14	14	#include "../EnumDefinitions/EnumDefinitions.h"
15	15	#include "../include/include.h"
16		#include "../modules.h"
	16	#include "../modules/modules.h"
17	17	#include "./solutions.h"
18	18

issm/trunk/src/c/solutions/transient_core.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* transient_core(Model* model){

issm/trunk/src/c/solutions/transient_core_2d.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* transient_core_2d(Model* model){

issm/trunk/src/c/solutions/transient_core_3d.cpp

r3895	r3913
8	8	#include "../EnumDefinitions/EnumDefinitions.h"
9	9	#include "./solutions.h"
10		#include "../modules.h"
	10	#include "../modules/modules.h"
11	11
12	12	DataSet* transient_core_3d(Model* model){

issm/trunk/src/mex/AverageFilter/AverageFilter.h

r3712	r3913
11	11	void AverageFilterUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Bamg/Bamg.h

r3712	r3913
9	9	void BamgUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/BamgConvertMesh/BamgConvertMesh.h

r3712	r3913
9	9	void BamgConvertMeshUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/BuildNodeSets/BuildNodeSets.h

r3712	r3913
11	11	void BuildNodeSetsUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ComputeBasalStress/ComputeBasalStress.h

r3841	r3913
9	9	void ComputeBasalStressUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ComputePressure/ComputePressure.h

r3841	r3913
9	9	void ComputePressureUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ConfigureObjects/ConfigureObjects.h

r3712	r3913
11	11	void ConfigureObjectsUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ContourToMesh/ContourToMesh.h

r3712	r3913
11	11	void ContourToMeshUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ContourToNodes/ContourToNodes.h

r3712	r3913
11	11	void ContourToNodesUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ControlConstrain/ControlConstrain.h

r3715	r3913
10	10	void ControlConstrainUsage(void);
11	11
12		#include "../../c/modules.h"
	12	#include "../../c/modules/modules.h"
13	13	#include "../../c/DataSet/DataSet.h"
14	14	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ControlOptimization/ControlOptimization.h

r3841	r3913
9	9	void ControlOptimizationUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/CostFunction/CostFunction.h

r3841	r3913
9	9	void CostFunctionUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/DepthAverageInput/DepthAverageInput.h

r3880	r3913
9	9	void DepthAverageInputUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Dof/Dof.h

r3712	r3913
11	11	void DofUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Du/Du.h

r3841	r3913
9	9	void DuUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Echo/Echo.h

r3712	r3913
9	9	void EchoUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ElementConnectivity/ElementConnectivity.h

r3712	r3913
11	11	void ElementConnectivityUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ExtrudeInput/ExtrudeInput.h

r3883	r3913
9	9	void ExtrudeInputUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/FieldAverageOntoVertices/FieldAverageOntoVertices.h

r3712	r3913
11	11	void FieldAverageOntoVerticesUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/FieldDepthAverage/FieldDepthAverage.h

r3712	r3913
11	11	void FieldDepthAverageUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/FieldExtrude/FieldExtrude.h

r3712	r3913
11	11	void FieldExtrudeUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/GetSolutionFromInputs/GetSolutionFromInputs.h

r3836	r3913
9	9	void GetSolutionFromInputsUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Gradj/Gradj.h

r3841	r3913
9	9	void GradjUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/HoleFiller/HoleFiller.h

r3712	r3913
11	11	void HoleFillerUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/InterpFromGridToMesh/InterpFromGridToMesh.h

r3712	r3913
9	9	void InterpFromGridToMeshUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/InterpFromMeshToGrid/InterpFromMeshToGrid.h

r3712	r3913
11	11	void InterpFromMeshToGridUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.h

r3712	r3913
9	9	void InterpFromMeshToMesh2dUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.h

r3712	r3913
9	9	void InterpFromMeshToMesh3dUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/MassFlux/MassFlux.h

r3715	r3913
11	11	void MassFluxUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Mergesolutionfromftog/Mergesolutionfromftog.h

r3712	r3913
11	11	void MergesolutionfromftogUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/MeshPartition/MeshPartition.h

r3712	r3913
11	11	void MeshPartitionUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Misfit/Misfit.h

r3841	r3913
9	9	void MisfitUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ModelProcessor/ModelProcessor.h

r3712	r3913
9	9	void ModelProcessorUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/MpcNodes/MpcNodes.h

r3712	r3913
11	11	void MpcNodesUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/NodeConnectivity/NodeConnectivity.h

r3712	r3913
11	11	void NodeConnectivityUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/NormalizeConstraints/NormalizeConstraints.h

r3712	r3913
9	9	void NormalizeConstraintsUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Orth/Orth.h

r3712	r3913
11	11	void OrthUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/OutputRifts/OutputRifts.h

r3712	r3913
11	11	void OutputRiftsUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ParameterOutput/ParameterOutput.h

r3841	r3913
9	9	void ParameterOutputUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/PenaltyConstraints/PenaltyConstraints.h

r3841	r3913
9	9	void PenaltyConstraintsUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/PenaltySystemMatrices/PenaltySystemMatrices.h

r3841	r3913
9	9	void PenaltySystemMatricesUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/ProcessParams/ProcessParams.h

r3712	r3913
11	11	void ProcessParamsUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.h

r3712	r3913
11	11	void PropagateFlagsFromConnectivityUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Qmu/Qmu.h

r3715	r3913
11	11	void QmuUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Reduceloadfromgtof/Reduceloadfromgtof.h

r3712	r3913
11	11	void ReduceloadfromgtofUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Reducematrixfromgtof/Reducematrixfromgtof.h

r3712	r3913
11	11	void ReducematrixfromgtofUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Reducevectorgtof/Reducevectorgtof.h

r3712	r3913
11	11	void ReducevectorgtofUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Reducevectorgtos/Reducevectorgtos.h

r3712	r3913
11	11	void ReducevectorgtosUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/SetStructureField/SetStructureField.h

r3712	r3913
13	13	#define OUTPUTHANDLE plhs[0]
14	14
15		#include "../../c/modules.h"
	15	#include "../../c/modules/modules.h"
16	16	#include "../../c/DataSet/DataSet.h"
17	17	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Solver/Solver.h

r3715	r3913
11	11	void SolverUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/SpcNodes/SpcNodes.h

r3712	r3913
11	11	void SpcNodesUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/SplitSolutionVector/SplitSolutionVector.h

r3773	r3913
11	11	void SplitSolutionVectorUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/shared/shared.h"
15	15

issm/trunk/src/mex/SystemMatrices/SystemMatrices.h

r3841	r3913
9	9	void SystemMatricesUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/Test/Test.h

r3712	r3913
9	9	void TestUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/TriMesh/TriMesh.h

r3712	r3913
10	10	#include "string.h"
11	11
12		#include "../../c/modules.h"
	12	#include "../../c/modules/modules.h"
13	13	#include "../../c/DataSet/DataSet.h"
14	14	#include "../../c/shared/shared.h"

issm/trunk/src/mex/TriMeshNoDensity/TriMeshNoDensity.h

r3712	r3913
10	10	#include "string.h"
11	11
12		#include "../../c/modules.h"
	12	#include "../../c/modules/modules.h"
13	13	#include "../../c/DataSet/DataSet.h"
14	14	#include "../../c/shared/shared.h"

issm/trunk/src/mex/TriMeshProcessRifts/TriMeshProcessRifts.h

r3715	r3913
10	10	#include "string.h"
11	11
12		#include "../../c/modules.h"
	12	#include "../../c/modules/modules.h"
13	13	#include "../../c/DataSet/DataSet.h"
14	14	#include "../../c/shared/shared.h"

issm/trunk/src/mex/TriMeshRefine/TriMeshRefine.h

r3712	r3913
10	10	#include "string.h"
11	11
12		#include "../../c/modules.h"
	12	#include "../../c/modules/modules.h"
13	13	#include "../../c/DataSet/DataSet.h"
14	14	#include "../../c/shared/shared.h"

issm/trunk/src/mex/UpdateGeometry/UpdateGeometry.h

r3712	r3913
11	11	void UpdateGeometryUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/UpdateInputsFromConstant/UpdateInputsFromConstant.h

r3891	r3913
9	9	void UpdateInputsFromConstantUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/UpdateInputsFromSolution/UpdateInputsFromSolution.h

r3841	r3913
9	9	void UpdateInputsFromSolutionUsage(void);
10	10
11		#include "../../c/modules.h"
	11	#include "../../c/modules/modules.h"
12	12	#include "../../c/DataSet/DataSet.h"
13	13	#include "../../c/shared/shared.h"

issm/trunk/src/mex/UpdateInputsFromVector/UpdateInputsFromVector.h

r3715	r3913
11	11	void UpdateInputsFromVectorUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

issm/trunk/src/mex/UpdateVertexPositions/UpdateVertexPositions.h

r3712	r3913
11	11	void UpdateVertexPositionsUsage(void);
12	12
13		#include "../../c/modules.h"
	13	#include "../../c/modules/modules.h"
14	14	#include "../../c/DataSet/DataSet.h"
15	15	#include "../../c/shared/shared.h"

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