Changeset 2586 for issm/trunk/src/m/classes/public/BuildQueueingScriptcosmos.m

Timestamp:

11/02/09 13:51:49 (15 years ago)

Author:

Mathieu Morlighem

Message:

Now waitonlock is a double (not an integer)
Cosmos queueing script is also in BASH (easier to launch: no bug)

File:

• issm/trunk/src/m/classes/public/BuildQueueingScriptcosmos.m (modified) (2 diffs)

issm/trunk/src/m/classes/public/BuildQueueingScriptcosmos.m

@@ -54 +54 @@
 
 
-fprintf(fid,'#!/bin/csh\n');
+fprintf(fid,'#!/bin/bash\n');
 fprintf(fid,'#PBS -l select=%i:ncpus=1\n',md.np);
 fprintf(fid,'#PBS -l walltime=%i\n',md.time*60); %walltime is in seconds.
@@ -63 +63 @@
 fprintf(fid,'#PBS -e %s.errlog \n',md.name);
 
-fprintf(fid,'setenv PBS_O_WORKDIR %s\n',executionpath);
+fprintf(fid,'export PBS_O_WORKDIR=%s\n',executionpath);
 fprintf(fid,'cd $PBS_O_WORKDIR\n');
-fprintf(fid,'setenv OMP_NUM_THREADS 1\n');
-fprintf(fid,'limit stacksize unlimited\n');
-fprintf(fid,'limit coredumpsize 0\n');
+fprintf(fid,'export OMP_NUM_THREADS=1\n');
+fprintf(fid,'ulimit -s unlimited\n');
+fprintf(fid,'ulimit -c 0\n');
 fprintf(fid,'/opt/mpich/gm/intel10.1/bin/mpirun -np %i %s/%s.exe %s %s.bin %s.outbin %s.lock',md.np,codepath,AnalysisTypeFromEnum(md.analysis_type),executionpath,md.name,md.name,md.name);
 fclose(fid);