source: issm/trunk/jenkins/linux64_murdo@ 19105

#-------------------------------#
# 1: ISSM general configuration #
#-------------------------------#

#ISSM CONFIGURATION 
ISSM_CONFIG='--prefix=$ISSM_DIR\
        --with-matlab-dir=$MATLAB_DIR \
        --with-triangle-dir=$ISSM_DIR/externalpackages/triangle/install \
        --with-mpi-include=$ISSM_DIR/externalpackages/mpich/install/include  \
        --with-mpi-libflags="-L$ISSM_DIR/externalpackages/mpich/install/lib -lmpich" \
        --with-petsc-dir=$ISSM_DIR/externalpackages/petsc/install \
        --with-metis-dir=$ISSM_DIR/externalpackages/petsc/install \
        --with-mumps-dir=$ISSM_DIR/externalpackages/petsc/install \
        --with-blas-lapack-dir=$ISSM_DIR/externalpackages/petsc/install \
        --with-python-dir=$ISSM_DIR/externalpackages/python/install\
        --with-python-numpy-dir=$ISSM_DIR/externalpackages/python/install/lib/python2.7/site-packages/numpy/core/include/numpy\
        --with-chaco-dir="$ISSM_DIR/externalpackages/chaco/install" \
        --with-dakota-dir=$ISSM_DIR/externalpackages/dakota/install \
        --with-boost-dir=$ISSM_DIR/externalpackages/boost/install/ \
        --with-fortran-lib="-L/usr/lib/gcc/x86_64-linux-gnu/4.6/ -lgfortran" \
        --with-m1qn3-dir=$ISSM_DIR/externalpackages/m1qn3/install \
        --with-numthreads=18 \
        --enable-development \
        --enable-debugging '

#MATLAB path
MATLAB_PATH="/usr/local/matlab80/"

#PYTHON and MATLAB testing
MATLAB_TEST=1
PYTHON_TEST=1

#execution path used for parallel runs
EXECUTION_PATH=$ISSM_DIR/execution

#repo:
REPOSITORY="https://issm.ess.uci.edu/svn/issm/issm/trunk-jpl"

#-----------------------------------#
# 3: External packages installation #
#-----------------------------------#

#ISSM_EXTERNALPACKAGES can have 3 values:
# - "install" install all external packages listed below
# - "copy"    copy existing directories (EXTERNALPACKAGESDIR)
# - "none"    leave external packages as is
#             ->skip to section 4
ISSM_EXTERNALPACKAGES="install"
EXTERNALPACKAGESDIR=$ISSM_DIR/externalpackages

#List of external pakages to be installed and their installation scripts
EXTERNALPACKAGES="autotools     install.sh                
                                                matlab        install.sh                
                                                mpich         install-3.0-linux64.sh    
                                                cmake         install.sh                
                                                petsc         install-3.5-linux64.sh    
                                                triangle      install-linux64.sh        
                                                boost         install.sh                
                                                dakota        install-5.3.1-linux64.sh  
                                                chaco         install.sh 
                                                python        install-2.7.3-linux64.sh    
                                                nose          install-linux64-python2.sh  
                                                blas          install-linux64.sh          
                                                lapack        install-linux64.sh          
                                                git           install.sh                  
                                                m1qn3         install.sh          
                                                numpy         install-linux64.sh          
                                                scipy         install-linux64.sh          
                                                hdf5          install.sh                  
                                                netcdf        install.sh                  
                                                netcdf-python install.sh
                                                shell2junit   install.sh"


#---------------------#
# 4: ISSM Compilation #
#---------------------#

#ISSM_COMPILATION can have 2 values:
# - "yes" compile ISSM
# - "no"  do not compile ISSM
ISSM_COMPILATION="yes"

#------------------------#
# 5: Nightly run options #
#------------------------#

#number of cpus used in ISSM installation and compilation (one is usually
#safer as some packages are very sensitive to parallel compilation)
NUMCPUS_INSTALL=8

#number of cpus used in the nightly runs.
NUMCPUS_RUN=8

#Nightly run options. The matlab routine runme.m will be called
#as follows: runme($MATLAB_NROPTIONS). The options must be understandable
#by Matlab and runme.m
#ex: "'id',[101 102 103]"
MATLAB_NROPTIONS="'exclude',[119,514,701,702,435]"
PYTHON_NROPTIONS="--exclude 119 514 701 702 435"