source: issm/trunk/jenkins/linux64_murdo@ 19105

Last change on this file since 19105 was 19105, checked in by Mathieu Morlighem, 10 years ago

merged trunk-jpl and trunk for revision 19103
  • Property svn:executable set to *
File size: 3.6 KB
Line 
1
2#-------------------------------#
3# 1: ISSM general configuration #
4#-------------------------------#
5
6#ISSM CONFIGURATION
7ISSM_CONFIG='--prefix=$ISSM_DIR\
8 --with-matlab-dir=$MATLAB_DIR \
9 --with-triangle-dir=$ISSM_DIR/externalpackages/triangle/install \
10 --with-mpi-include=$ISSM_DIR/externalpackages/mpich/install/include \
11 --with-mpi-libflags="-L$ISSM_DIR/externalpackages/mpich/install/lib -lmpich" \
12 --with-petsc-dir=$ISSM_DIR/externalpackages/petsc/install \
13 --with-metis-dir=$ISSM_DIR/externalpackages/petsc/install \
14 --with-mumps-dir=$ISSM_DIR/externalpackages/petsc/install \
15 --with-blas-lapack-dir=$ISSM_DIR/externalpackages/petsc/install \
16 --with-python-dir=$ISSM_DIR/externalpackages/python/install\
17 --with-python-numpy-dir=$ISSM_DIR/externalpackages/python/install/lib/python2.7/site-packages/numpy/core/include/numpy\
18 --with-chaco-dir="$ISSM_DIR/externalpackages/chaco/install" \
19 --with-dakota-dir=$ISSM_DIR/externalpackages/dakota/install \
20 --with-boost-dir=$ISSM_DIR/externalpackages/boost/install/ \
21 --with-fortran-lib="-L/usr/lib/gcc/x86_64-linux-gnu/4.6/ -lgfortran" \
22 --with-m1qn3-dir=$ISSM_DIR/externalpackages/m1qn3/install \
23 --with-numthreads=18 \
24 --enable-development \
25 --enable-debugging '
26
27#MATLAB path
28MATLAB_PATH="/usr/local/matlab80/"
29
30#PYTHON and MATLAB testing
31MATLAB_TEST=1
32PYTHON_TEST=1
33
34#execution path used for parallel runs
35EXECUTION_PATH=$ISSM_DIR/execution
36
37#repo:
38REPOSITORY="https://issm.ess.uci.edu/svn/issm/issm/trunk-jpl"
39
40#-----------------------------------#
41# 3: External packages installation #
42#-----------------------------------#
43
44#ISSM_EXTERNALPACKAGES can have 3 values:
45# - "install" install all external packages listed below
46# - "copy" copy existing directories (EXTERNALPACKAGESDIR)
47# - "none" leave external packages as is
48# ->skip to section 4
49ISSM_EXTERNALPACKAGES="install"
50EXTERNALPACKAGESDIR=$ISSM_DIR/externalpackages
51
52#List of external pakages to be installed and their installation scripts
53EXTERNALPACKAGES="autotools install.sh
54 matlab install.sh
55 mpich install-3.0-linux64.sh
56 cmake install.sh
57 petsc install-3.5-linux64.sh
58 triangle install-linux64.sh
59 boost install.sh
60 dakota install-5.3.1-linux64.sh
61 chaco install.sh
62 python install-2.7.3-linux64.sh
63 nose install-linux64-python2.sh
64 blas install-linux64.sh
65 lapack install-linux64.sh
66 git install.sh
67 m1qn3 install.sh
68 numpy install-linux64.sh
69 scipy install-linux64.sh
70 hdf5 install.sh
71 netcdf install.sh
72 netcdf-python install.sh
73 shell2junit install.sh"
74
75
76#---------------------#
77# 4: ISSM Compilation #
78#---------------------#
79
80#ISSM_COMPILATION can have 2 values:
81# - "yes" compile ISSM
82# - "no" do not compile ISSM
83ISSM_COMPILATION="yes"
84
85#------------------------#
86# 5: Nightly run options #
87#------------------------#
88
89#number of cpus used in ISSM installation and compilation (one is usually
90#safer as some packages are very sensitive to parallel compilation)
91NUMCPUS_INSTALL=8
92
93#number of cpus used in the nightly runs.
94NUMCPUS_RUN=8
95
96#Nightly run options. The matlab routine runme.m will be called
97#as follows: runme($MATLAB_NROPTIONS). The options must be understandable
98#by Matlab and runme.m
99#ex: "'id',[101 102 103]"
100MATLAB_NROPTIONS="'exclude',[119,514,701,702,435]"
101PYTHON_NROPTIONS="--exclude 119 514 701 702 435"
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