source: issm/trunk-jpl/externalpackages/dakota/install-6.2-mac.sh@ 27397

Last change on this file since 27397 was 27397, checked in by jdquinn, 2 years ago

CHG: Updates to way we discover libgfortran in ext pkg install scripts; file name; compact unbind warning suppression.

  • Property svn:executable set to *
File size: 5.3 KB
Line 
1#!/bin/bash
2set -eu
3
4
5## Constants
6#
7VER="6.2"
8
9PREFIX="${ISSM_DIR}/externalpackages/dakota/install" # Set to location where external package should be installed
10
11# Find libgfortran so that we do not have to hardcode it.
12#
13# TODO:
14# - Move this to etc/environment.sh
15#
16LIBGFORTRAN=$(find /usr -name libgfortran* 2>/dev/null | egrep -n libgfortran.a | sed "s/[0-9]*://g" | head -1)
17LIBGFORTRAN_ROOT=${LIBGFORTRAN%/*}
18
19## Environment
20#
21export BLAS_LIBS="-L${BLAS_ROOT}/lib -lfblas -L${LIBGFORTRAN_ROOT} -lgfortran" # Need to export BLAS_LIBS *and* pass it as an option to CMake to ensure that external packages also find it
22export DAK_BUILD=${ISSM_DIR}/externalpackages/dakota/build # DO NOT CHANGE THIS
23export DAK_INSTALL=${PREFIX} # DO NOT CHANGE THIS
24export DAK_SRC=${ISSM_DIR}/externalpackages/dakota/src # DO NOT CHANGE THIS
25export LAPACK_LIBS="-L${LAPACK_ROOT}/lib -lflapack -L${LIBGFORTRAN_ROOT} -lgfortran" # Need to export LAPACK_LIBS *and* pass it as an option to CMake to ensure that external packages also find it
26
27# Cleanup
28rm -rf ${DAK_BUILD} ${DAK_INSTALL} ${DAK_SRC}
29mkdir -p ${DAK_BUILD} ${DAK_INSTALL} ${DAK_SRC}
30
31# Download source
32${ISSM_DIR}/scripts/DownloadExternalPackage.sh "https://issm.ess.uci.edu/files/externalpackages/dakota-${VER}-public.src.tar.gz" "dakota-${VER}-public-src.tar.gz"
33
34# Unpack source
35tar -zxvf dakota-${VER}-public-src.tar.gz
36
37# Move source to 'src' directory
38mv dakota-${VER}.0.src/* ${DAK_SRC}
39rm -rf dakota-${VER}.0.src
40
41# Copy customized source and configuration files to 'src' directory
42cp configs/${VER}/packages/DDACE/src/Analyzer/MainEffectsExcelOutput.cpp ${DAK_SRC}/packages/DDACE/src/Analyzer
43cp configs/${VER}/packages/queso/src/misc/src/1DQuadrature.C ${DAK_SRC}/packages/queso/src/misc/src
44cp configs/${VER}/packages/surfpack/src/surfaces/nkm/NKM_KrigingModel.cpp ${DAK_SRC}/packages/surfpack/src/surfaces/nkm
45cp configs/${VER}/packages/VPISparseGrid/src/sandia_rules.cpp ${DAK_SRC}/packages/VPISparseGrid/src
46cp configs/${VER}/src/DakotaInterface.cpp ${DAK_SRC}/src
47cp configs/${VER}/src/NonDLocalReliability.cpp ${DAK_SRC}/src
48cp configs/${VER}/src/NonDSampling.cpp ${DAK_SRC}/src
49
50# Copy customized source and configuration files specific to Mac to 'src' directory
51cp configs/${VER}/mac/cmake/BuildDakotaCustom.cmake ${DAK_SRC}/cmake
52cp configs/${VER}/mac/cmake/DakotaDev.cmake ${DAK_SRC}/cmake
53cp configs/${VER}/mac/cmake/InstallDarwinDylibs.cmake ${DAK_SRC}/cmake
54
55# Disable requirement of Python 2 for TriBITS
56sed -i'' -e 's|SET(PythonInterp_FIND_VERSION|#SET(PythonInterp_FIND_VERSION|' ${DAK_SRC}/packages/teuchos/cmake/tribits/package_arch/TribitsFindPythonInterp.cmake
57
58# Configure
59cd ${DAK_BUILD}
60cmake \
61 -DBUILD_SHARED_LIBS=ON \
62 -DBUILD_STATIC_LIBS=OFF \
63 -DCMAKE_C_COMPILER=${MPI_HOME}/bin/mpicc \
64 -DCMAKE_CXX_COMPILER=${MPI_HOME}/bin/mpicxx \
65 -DCMAKE_CXX_FLAGS="-fdelayed-template-parsing" \
66 -DCMAKE_CXX_STANDARD="11" \
67 -DCMAKE_Fortran_COMPILER=${MPI_HOME}/bin/mpif77 \
68 -DBoost_NO_BOOST_CMAKE=TRUE \
69 -DHAVE_ACRO=OFF \
70 -DHAVE_JEGA=OFF \
71 -DHAVE_QUESO=ON \
72 -DDAKOTA_HAVE_GSL=ON \
73 -C${DAK_SRC}/cmake/BuildDakotaCustom.cmake \
74 -C${DAK_SRC}/cmake/DakotaDev.cmake \
75 ${DAK_SRC}
76
77# Compile and install
78if [ $# -eq 0 ]; then
79 make
80 make install
81else
82 make -j $1
83 make -j $1 install
84fi
85
86cd ${DAK_INSTALL}
87
88# Comment out definition of HAVE_MPI in Teuchos config header file in order to
89# avoid conflict with our definition
90sed -i -e "s/#define HAVE_MPI/\/* #define HAVE_MPI *\//g" include/Teuchos_config.h
91
92# Set install_name for all shared libraries
93cd ${DAK_INSTALL}/lib
94for name in *.dylib; do
95 install_name_tool -id ${DAK_INSTALL}/lib/${name} ${name}
96done
97
98## Patch install names for certain libraries
99#
100# TODO: Figure out how to reconfigure source to apply these install names at compile time
101#
102install_name_tool -change libdakota_src_fortran.dylib ${DAK_INSTALL}/lib/libdakota_src_fortran.dylib libdakota_src.dylib
103install_name_tool -change liblhs_mod.dylib ${DAK_INSTALL}/lib/liblhs_mod.dylib liblhs.dylib
104install_name_tool -change liblhs_mods.dylib ${DAK_INSTALL}/lib/liblhs_mods.dylib liblhs.dylib
105install_name_tool -change liblhs_mod.dylib ${DAK_INSTALL}/lib/liblhs_mod.dylib liblhs_mods.dylib
106install_name_tool -change libteuchos.dylib ${DAK_INSTALL}/lib/libteuchos.dylib liboptpp.dylib
107install_name_tool -change libdfftpack.dylib ${DAK_INSTALL}/lib/libdfftpack.dylib libpecos.dylib
108install_name_tool -change liblhs.dylib ${DAK_INSTALL}/lib/liblhs.dylib libpecos.dylib
109install_name_tool -change liblhs_mod.dylib ${DAK_INSTALL}/lib/liblhs_mod.dylib libpecos.dylib
110install_name_tool -change liblhs_mods.dylib ${DAK_INSTALL}/lib/liblhs_mods.dylib libpecos.dylib
111install_name_tool -change libpecos_src.dylib ${DAK_INSTALL}/lib/libpecos_src.dylib libpecos.dylib
112install_name_tool -change libteuchos.dylib ${DAK_INSTALL}/lib/libteuchos.dylib libpecos.dylib
113install_name_tool -change libdfftpack.dylib ${DAK_INSTALL}/lib/libdfftpack.dylib libpecos_src.dylib
114install_name_tool -change liblhs.dylib ${DAK_INSTALL}/lib/liblhs.dylib libpecos_src.dylib
115install_name_tool -change liblhs_mod.dylib ${DAK_INSTALL}/lib/liblhs_mod.dylib libpecos_src.dylib
116install_name_tool -change liblhs_mods.dylib ${DAK_INSTALL}/lib/liblhs_mods.dylib libpecos_src.dylib
117install_name_tool -change libteuchos.dylib ${DAK_INSTALL}/lib/libteuchos.dylib libpecos_src.dylib
118install_name_tool -change libsurfpack_fortran.dylib ${DAK_INSTALL}/lib/libsurfpack_fortran.dylib libsurfpack.dylib
Note: See TracBrowser for help on using the repository browser.