source: issm/oecreview/Archive/16133-16554/ISSM-16529-16530.diff@ 16556

Last change on this file since 16556 was 16556, checked in by Mathieu Morlighem, 12 years ago

NEW: added Archive/16133-16554
File size: 4.2 KB
RevLine 
[16556]1Index: ../trunk-jpl/externalpackages/petsc/install-3.4-pleiades-mpich2.sh
2===================================================================
3--- ../trunk-jpl/externalpackages/petsc/install-3.4-pleiades-mpich2.sh (revision 16529)
4+++ ../trunk-jpl/externalpackages/petsc/install-3.4-pleiades-mpich2.sh (revision 16530)
5@@ -1,61 +0,0 @@
6-#!/bin/bash
7-
8-#Some cleanup
9-rm -rf install petsc-3.4.2 src
10-mkdir install src
11-
12-#Download from ISSM server
13-$ISSM_DIR/scripts/DownloadExternalPackage.py 'http://issm.jpl.nasa.gov/files/externalpackages/petsc-lite-3.4.2.tar.gz' 'petsc-3.4.2.tar.gz'
14-
15-#Untar and move petsc to install directory
16-tar -zxvf petsc-3.4.2.tar.gz
17-mv petsc-3.4.2/* src/
18-rm -rf petsc-3.4.2
19-
20-#configure
21-cd src
22-./config/configure.py \
23- --prefix="$ISSM_DIR/externalpackages/petsc/install" \
24- --PETSC_ARCH="$ISSM_ARCH" \
25- --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
26- --with-batch=1 \
27- --with-debugging=0 \
28- --with-shared-libraries=1 \
29- --known-mpi-shared-libraries=1 \
30- --with-mpi=1 \
31- --with-mpi-lib="/nasa/mvapich2/1.6.sles11/gcc/lib/libmpich.a"\
32- --with-mpi-include="/nasa/mvapich2/1.6.sles11/gcc/include" \
33- --download-f-blas-lapack=yes \
34- --download-scalapack=yes \
35- --download-blacs=yes \
36- --download-mumps=yes \
37- --download-metis=yes \
38- --download-parmetis=yes \
39- --download-trilinos=yes \
40- --download-euclid=yes \
41- --download-hypre=yes \
42- --COPTFLAGS="-lmpich" \
43- --FOPTFLAGS="-lmpich" \
44- --CXXOPTFLAGS="-lmpich"
45-
46-#prepare script to reconfigure petsc
47-cat > script.queue << EOF
48-#PBS -S /bin/bash
49-#PBS -l select=1:ncpus=1:model=wes
50-#PBS -l walltime=200
51-#PBS -W group_list=s1010
52-#PBS -m e
53-
54-. /usr/share/modules/init/bash
55-module load mpi-mvapich2/1.6/gcc
56-module load gcc/4.7.0
57-
58-export PATH="$PATH:."
59-export MPI_GROUP_MAX=64
60-mpiexec -np 1 ./conftest-linux-gnu-ia64-intel.py
61-EOF
62-
63-#print instructions
64-echo "== Now: cd src/ "
65-echo "== qsub -q devel script.queue "
66-echo "== Then run reconfigure script generated by PETSc and follow instructions"
67Index: ../trunk-jpl/externalpackages/petsc/install-3.4-pleiades-mpich2-gcc470.sh
68===================================================================
69--- ../trunk-jpl/externalpackages/petsc/install-3.4-pleiades-mpich2-gcc470.sh (revision 0)
70+++ ../trunk-jpl/externalpackages/petsc/install-3.4-pleiades-mpich2-gcc470.sh (revision 16530)
71@@ -0,0 +1,61 @@
72+#!/bin/bash
73+
74+#Some cleanup
75+rm -rf install petsc-3.4.2 src
76+mkdir install src
77+
78+#Download from ISSM server
79+$ISSM_DIR/scripts/DownloadExternalPackage.py 'http://issm.jpl.nasa.gov/files/externalpackages/petsc-lite-3.4.2.tar.gz' 'petsc-3.4.2.tar.gz'
80+
81+#Untar and move petsc to install directory
82+tar -zxvf petsc-3.4.2.tar.gz
83+mv petsc-3.4.2/* src/
84+rm -rf petsc-3.4.2
85+
86+#configure
87+cd src
88+./config/configure.py \
89+ --prefix="$ISSM_DIR/externalpackages/petsc/install" \
90+ --PETSC_ARCH="$ISSM_ARCH" \
91+ --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
92+ --with-batch=1 \
93+ --with-debugging=0 \
94+ --with-shared-libraries=1 \
95+ --known-mpi-shared-libraries=1 \
96+ --with-mpi=1 \
97+ --with-mpi-lib="/nasa/mvapich2/1.6.sles11/gcc/lib/libmpich.a"\
98+ --with-mpi-include="/nasa/mvapich2/1.6.sles11/gcc/include" \
99+ --download-f-blas-lapack=yes \
100+ --download-scalapack=yes \
101+ --download-blacs=yes \
102+ --download-mumps=yes \
103+ --download-metis=yes \
104+ --download-parmetis=yes \
105+ --download-trilinos=yes \
106+ --download-euclid=yes \
107+ --download-hypre=yes \
108+ --COPTFLAGS="-lmpich" \
109+ --FOPTFLAGS="-lmpich" \
110+ --CXXOPTFLAGS="-lmpich"
111+
112+#prepare script to reconfigure petsc
113+cat > script.queue << EOF
114+#PBS -S /bin/bash
115+#PBS -l select=1:ncpus=1:model=wes
116+#PBS -l walltime=200
117+#PBS -W group_list=s1010
118+#PBS -m e
119+
120+. /usr/share/modules/init/bash
121+module load mpi-mvapich2/1.6/gcc
122+module load gcc/4.7.0
123+
124+export PATH="$PATH:."
125+export MPI_GROUP_MAX=64
126+mpiexec -np 1 ./conftest-linux-gnu-ia64-intel.py
127+EOF
128+
129+#print instructions
130+echo "== Now: cd src/ "
131+echo "== qsub -q devel script.queue "
132+echo "== Then run reconfigure script generated by PETSc and follow instructions"
133
134Property changes on: ../trunk-jpl/externalpackages/petsc/install-3.4-pleiades-mpich2-gcc470.sh
135___________________________________________________________________
136Added: svn:executable
137## -0,0 +1 ##
138+*
139\ No newline at end of property
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