Changes between Version 1 and Version 2 of pleiadescsh

Timestamp:

04/26/17 11:51:56 (8 years ago)

Author:

schlegel

Comment:

--

pleiadescsh

@@ -26 +26 @@
 
 #Packages
+module load pkgsrc
 module load comp-intel/2016.2.181
 module load mpi-sgi/mpt
-module load svn/1.6.21
-module load cmake/2.8.12.1
 }}}
 
@@ -38 +37 @@
 Pleiades will ''only'' be used to run the code, you will use your local machine for pre and post processing, you will never use Pleiades' matlab. You can check out ISSM and install the following packages:
  - autotools
+ - cmake
  - PETSc (use the pleiades script and ``follow`` the instructions, you will need to submit a job and compile PETSc manually, do not make test, it will not work on the cluster)
  - m1qn3
@@ -54 +54 @@
  --with-mpi-include=" " \
  --with-mpi-libflags=" -lmpi" \
- --with-mkl-libflags="-L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread -lm" \
+ --with-mkl-libflags="-L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread -lm " \
  --with-metis-dir="$ISSM_DIR/externalpackages/petsc/install" \
  --with-mumps-dir="$ISSM_DIR/externalpackages/petsc/install" \
  --with-scalapack-dir="$ISSM_DIR/externalpackages/petsc/install" \
  --with-cxxoptflags="-O3 -axAVX" \
- --with-vendor="intel-pleiades"\
+ --with-fortran-lib="-L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/compiler/lib/intel64/ -lifcore -lifport" \
+ --with-vendor="intel-pleiades" \
  --enable-development
 }}}
@@ -65 +66 @@
 == Installing ISSM on Pleiades with Dakota ==
 
-For Dakota to run, you will need to have additional packages. Therefore, in your `~/.cshrc` you will need to load the following package in addition to those listed above:
+For Dakota to run, you you will still need to make autotools, cmake PETSc, and m1qn3.
 
-{{{
-#Packages
-module load math/intel_mkl_64_10.0.011
-}}}
-
-
-You will still need to make utotools, PETSc, and m1qn3.
-For PETSc, use the dakota install script:
- - install-3.7-pleiades_dakota6.2.sh
-
-In addition, will also need to build the external package:
- - boost, install-1.55-pleiades_dakota6.2.sh
+In addition, will need to build the external package:
+ - boost, install-1.55-pleiades.sh
  - dakota, install-6.2-pleiades.sh
 
@@ -103 +94 @@
 use your username for the `login` and enter your code path and execution path. These settings will be picked up automatically by matlab when you do `md.cluster=pfe()`
 
-For Dakota, make sure your module list includes math/intel_mkl_64_10.0.011 .
+Make sure your module list includes pkgsrc, comp-intel/2016.2.181, and mpi-sgi/mpt .
 
 == Running jobs on Pleiades ==