Changes between Version 56 and Version 57 of pleiadesbash


Ignore:
Timestamp:
11/12/24 10:39:13 (5 months ago)
Author:
badgeley
Comment:

--

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  • pleiadesbash

    v56 v57  
    5353'''Do NOT install mpich'''. We have to use the one provided by NAS. Pleiades will ''only'' be used to run the code, you will use your local machine for pre- and post- processing, you will never use Pleiades' copy of MATLAB. You can check out ISSM and install the following packages:
    5454 - m1qn3 (`./install-linux.sh`)
     55 - autotools
    5556 - that's it because we now use Pleiades' PETSc!
    5657
     
    6869{{{
    6970#!sh
    70 export CXXFLAGS="-g -Ofast"
     71export CXXFLAGS="-g -Ofast -axCORE-AVX2,AVX -xSSE4.2"
    7172export CFLAGS="-g -Ofast"
    7273
     
    8384   --with-m1qn3-dir="${ISSM_DIR}/externalpackages/m1qn3/install" \
    8485   --with-fortran-lib="-L${MKLROOT}/../compiler/lib/intel64_lin -lifcore -lifport -lgfortran" \
    85    --with-cxxoptflags="-g -Ofast -axCORE-AVX2,AVX -xSSE4.2" \
    8686   --enable-development
    8787}}}
     
    204204{{{
    205205#!sh
    206 export CXXFLAGS="-g -Ofast"
     206export CXXFLAGS="-g -Ofast -wd2196"
    207207export CFLAGS="-g -Ofast"
    208208
     
    224224   --enable-tape-alloc \
    225225   --with-fortran-lib="-L${MKLROOT}/../compiler/lib/intel64_lin -lifcore -lifport -lgfortran" \
    226    --with-cxxoptflags="-g -Ofast -wd2196" \
    227226   --enable-development
    228227}}}
     
    264263 {{{
    265264#!m
    266 md.cluster=pfe('numnodes',8,'time',30,'processor','bro','queue','devel');
     265md.cluster=pfe('numnodes',1,'time',28,'processor','bro','queue','devel');
    267266md.cluster.time=10;
    268267}}}
    269268
    270 to have a maximum job time of 10 minutes and 8 broadwell nodes. If the run lasts longer than 10 minutes, it will be killed and you will not be able to retrieve your results.
     269to have a maximum job time of 10 minutes and 1 broadwell node. If the run lasts longer than 10 minutes, it will be killed and you will not be able to retrieve your results. For more information about the processors, see [https://www.nas.nasa.gov/hecc/support/kb/pleiades-configuration-details_77.html].
    271270
    272271Now if you want to check the status of your job and the queue you are using, use this command: