Changes between Version 27 and Version 28 of pleiadesbash

Timestamp:

12/16/20 16:44:36 (4 years ago)

Author:

schlegel

Comment:

--

pleiadesbash

@@ -7 +7 @@
 Then, a NAS account has to be created by the new user:
  - go to [https://www.nas.nasa.gov/hecc/portal/accounts] select option 2 ("I want to request and account for myself")
- - provide the information requested using either GID = s1690 for Eric's group or GID = s1507 for Mathieu's group
+ - provide the information requested using either GID = s5692 for Eric's group or GID = s1507 for Mathieu's group
  - the PI will receive an email to approve the request
  - All users must complete NASA-mandatory Basic IT Security Training (This year's training is called "FY21 CYBERSECURITY AND SENSITIVE UNCLASSIFIED INFORMATION AWARENESS COURSE"). 
@@ -71 +71 @@
 == Installing ISSM on Pleiades with Dakota ==
 
-For Dakota to run, you you will still need to make autotools, cmake PETSc, and m1qn3.
+For Dakota to run, you you will still need to make PETSc, and m1qn3.
 
-In addition, will need to build the external package:
- - boost, install-1.55-pleiades.sh
+In addition, will need to build the external packages:
+ - cmake, install.sh
  - dakota, install-6.2-pleiades.sh
 
-Finally, add the following to your configuration script:
+Finally, you will need to make with mpi compilers by using the configuration script:
 
 {{{
- --with-boost-dir=$ISSM_DIR/externalpackages/boost/install \
+#!sh
+export F77=mpif77
+export FC=mpif90
+
+./configure \
+ --prefix=$ISSM_DIR \
+ --enable-standalone-libraries \
+ --with-wrappers=no \
+ --with-petsc-dir="$ISSM_DIR/externalpackages/petsc/install" \
+ --with-m1qn3-dir="$ISSM_DIR/externalpackages/m1qn3/install" \
+ --with-boost-dir=/nasa/pkgsrc/sles12/2018Q3/ \
  --with-dakota-dir=$ISSM_DIR/externalpackages/dakota/install \
+ --with-gsl-dir=/nasa/pkgsrc/sles12/2018Q3/ \
+ --with-mpi-include=" " \
+ --with-mpi-libflags=" -lmpi" \
+ --with-mkl-libflags="-L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/mkl/lib/intel64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread -lm -limf -lsvml -lirc" \
+ --with-metis-dir="$ISSM_DIR/externalpackages/petsc/install" \
+ --with-mumps-dir="$ISSM_DIR/externalpackages/petsc/install" \
+ --with-scalapack-dir="$ISSM_DIR/externalpackages/petsc/install" \
+ --with-graphics-lib="/usr/lib64/libX11.so" \
+ --with-fortran-lib="-L/nasa/intel/Compiler/2016.2.181/compilers_and_libraries_2016.2.181/linux/compiler/lib/intel64/ -lifcore -lifport" \
+ --with-vendor="intel-pleiades-mpi" \
+ --enable-development
 }}}
 
 == Installing ISSM on Pleiades with CoDiPack ==
 
-For CoDiPack, you you will still need to make autotools, cmake PETSc, and m1qn3.
+For CoDiPack, you you will still need to make cmake, PETSc, and m1qn3.
 
 In addition, will need to build the external package:
@@ -130 +151 @@
 cluster.codepath='/u/mmorligh/issm/trunk/bin';
 cluster.executionpath='/nobackup/mmorligh/execution/';
-cluster.grouplist='s1690';
+cluster.grouplist='s5692';
 cluster.port=1099;
 }}}