Changes between Version 4 and Version 5 of lonestar

Timestamp:

01/27/16 20:26:01 (9 years ago)

Author:

seroussi

Comment:

--

lonestar

@@ -7 +7 @@
 {{{
 #!sh
-Host lonestar lonestar.tacc.utexas.edu
-   HostName lonestar.tacc.utexas.edu
+Host lonestar ls5.tacc.utexas.edu
+   HostName ls5.tacc.utexas.edu
   User YOURUSERNAME
-  HostKeyAlias lonestar.tacc.utexas.edu
+  HostKeyAlias ls5.tacc.utexas.edu
   HostbasedAuthentication no
 }}}
-and replace `YOURUSERNAME` by your lonestar username.
+and replace `YOURUSERNAME` by your lonestar5 username.
 
-Once this is done, you can ssh lonestar by simply doing:
+Once this is done, you can ssh lonestar5 by simply doing:
 
 {{{
@@ -59 +59 @@
 export ISSM_DIR=PATHTOTRUNK
 source $ISSM_DIR/etc/environment.sh
-module load cmake/2.8.7
-module load mkl/10.3
+module load cmake/3.4.1
 }}}
 
@@ -81 +80 @@
    --with-kml=no \
    --with-bamg=no \
-   --with-metis-dir=$ISSM_DIR/externalpackages/metis/install \
+   --with-metis-dir="$ISSM_DIR/externalpackages/petsc/install" \
    --with-petsc-dir=$ISSM_DIR/externalpackages/petsc/install \
    --with-m1qn3-dir=$ISSM_DIR/externalpackages/m1qn3/install \
-   --with-mpi-include="/opt/apps/intel11_1/mvapich2/1.6/include/" \
-   --with-mpi-libflags="-L/opt/apps/intel11_1/mvapich2/1.6/lib/ -lmpich" \
-   --with-mkl-dir="$TACC_MKL_LIB" \
+   --with-mpi-include="/opt/cray/mpt/default/gni/mpich-intel/14.0/include/" \
+   --with-mpi-libflags="-Lopt/cray/mpt/default/gni/mpich-intel/14.0/lib/ -lmpich" \
+   --with-mkl-dir="/opt/apps/intel/16.0.1.150/compilers_and_libraries_2016.1.150/linux/mkl/lib/intel64" \
    --with-mumps-dir=$ISSM_DIR/externalpackages/petsc/install/ \
    --with-scalapack-dir=$ISSM_DIR/externalpackages/petsc/install/ \
@@ -103 +102 @@
 cluster.login='seroussi';
 cluster.codepath='/home1/03729/seroussi/trunk-jpl/bin/';
-cluster.executionpath='/home1/03729/seroussi/trunk-jpl/execution/';
+cluster.executionpath='/work/03729/seroussi/trunk-jpl/execution/';
 }}}
 
@@ -120 +119 @@
 to have a job of 2 nodes, 12 cpus for nodes, so a total of 24 cores.
 
+To submit a job on lonestar, do:
+
+ {{{
+#!m
+sbatch job.queue
+}}}
+
 Now if you want to check the status of your job and the queue you are using, type in the bash with the lonestar session: