Changes between Version 3 and Version 4 of gscc

Timestamp:

12/09/20 14:33:01 (5 years ago)

Author:

downs

Comment:

--

gscc

@@ -52 +52 @@
 }}}
 
-== Installing ISSM ==
+== Install ==
+
+= Install Anaconda =
 
 We will install ISSM within an Anaconda environment on GSCC. To install Anaconda3 run 
@@ -70 +72 @@
 }}}
 
-Copy ISSM files on your home directory on GSCC, add the following lines to your `~/.bashrc` on GSCC:
-{{{
-#!sh
-module unload rocks-openmpi
-export ISSM_DIR=/home/USERNAME/trunk-jpl/
-export CONDA_DIR=/home/USERNAME/anaconda3/envs/test/
-source $ISSM_DIR/etc/environment.sh
-}}}
-
-Create a file called environment.yml with the following contents:
+= Setup Anaconda3 environment =
+
+Now we'll set up an Anaconda environment called issm. Create a file on GSCC called environment.yml. Copy the following contents:
 
 {{{
@@ -104 +99 @@
 }}}
 
+With Anacodna activated, run 
+
+{{{
+#!sh
+conda env create -f environment.yml
+}}}
+
+= Install ISSM =
+
+Copy ISSM files on your home directory on GSCC, add the following lines to your `~/.bashrc` on GSCC:
+{{{
+#!sh
+module unload rocks-openmpi
+export ISSM_DIR=/home/USERNAME/trunk-jpl/
+export CONDA_DIR=/home/USERNAME/anaconda3/envs/test/
+source $ISSM_DIR/etc/environment.sh
+}}}
+
+Create a file called environment.yml with the following contents:
+
+
+
 Make sure that Anaconda is activated and do