Changes between Version 1 and Version 2 of computecanada

Timestamp:

09/21/23 12:43:22 (8 months ago)

Author:

Mathieu Morlighem

Comment:

--

computecanada

@@ -2 +2 @@
 
  == Download ISSM ==
+You can download the development branch `trunk-jpl`:
 {{{
 #!sh
@@ -15 +16 @@
 {{{
 #!sh
-module load gcc/9.3.0 openmpi/4.0.3 matlab/2020a metis parmetis imkl petsc
+module load gcc openmpi matlab metis parmetis imkl petsc
 export ISSM_DIR=PATHTOTRUNK
 source $ISSM_DIR/etc/environment.sh
 }}}
 
-Change PATHTOTRUNK. Log out and log back in to apply this change.
+Change PATHTOTRUNK to where `trunk-jpl` is located. Log out and log back in to apply this change.
 
  == Installing ISSM on the cluster  ==
@@ -33 +34 @@
         --prefix=$ISSM_DIR \
         --with-numthreads=2 \
-       --with-mkl-libflags="-lmkl_intel_ilp64 -lmkl_sequential -lmkl_core -lmkl_blacs_openmpi_lp64 -lmkl_scalapack_lp64" \
+        --with-mkl-libflags="-lmkl_gf_lp64 -lmkl_sequential  -lmkl_core -lmkl_blacs_openmpi_lp64 -lmkl_scalapack_lp64"\
         --with-petsc-dir="$EBROOTPETSC" \
-       --with-mumps-dir="$EBROOTPETSC" \
+        --with-mumps-dir="$EBROOTPETSC" \
         --with-m1qn3-dir="$ISSM_DIR/externalpackages/m1qn3/install" \
         --with-mpi-include="/some/path/just/to/enable" \
-        --with-mpi-libflags="-lmpi_cxx -lmpi_mpifh -lmpi" \
-        --with-fortran-lib="-L$EBROOTGCC/lib64 -lgfortran"
+        --with-mpi-libflags="-lmpi_cxx -lmpi_mpifh -lmpi" \
+        --with-fortran-lib="-L$EBROOTGCC/lib64 -lgfortran"
 }}}
 
-== XXX_settings.m ==
+== computecanada_settings.m ==
 
-You have to add a file in `$ISSM_DIR/src/m` entitled `sherlock_settings.m` with your personal settings:
+You have to add a file in `$ISSM_DIR/src/m` entitled `computecanada _settings.m` with your personal settings:
 
 {{{
@@ -54 +55 @@
 }}}
 
-Use your username for the `login` and enter your `codepath` and `executionpath`. These settings will be picked up automatically by MATLAB when you do `md.cluster=XXX()`
+Use your username for the `login` and enter your `codepath` and `executionpath`. These settings will be picked up automatically by MATLAB when you do `md.cluster=computecanada()`