#
# ChangeLog for issm/trunk-jpl
#
# Generated by Trac 1.4.3
# 06/07/25 07:32:33

Sat, 27 May 2017 03:18:13 GMT Eric.Larour [21750]
	* issm/trunk-jpl/src/c/classes/IoModel.cpp (modified)

	CHG: more comments.


Sat, 27 May 2017 03:15:21 GMT Eric.Larour [21749]
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified)

	CHG: more verbosing.


Sat, 27 May 2017 02:48:22 GMT Eric.Larour [21748]
	* issm/trunk-jpl/src/c/classes/Inputs/BoolInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/ControlInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/DatasetInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/DoubleArrayInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/DoubleInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/Input.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/IntInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/PentaInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/SegInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/TetraInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/TransientInput.h (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/TriaInput.h (modified)

	CHG: new method to retrieve interpolation type.


Sat, 27 May 2017 02:48:03 GMT Eric.Larour [21747]
	* issm/trunk-jpl/src/c/classes/Misfit.h (modified)

	CHG: added element discrete integrtaion.


Sat, 27 May 2017 02:47:25 GMT Eric.Larour [21746]
	* issm/trunk-jpl/src/c/modules/GetVectorFromInputsx/GetVectorFromInputsx.cpp (modified)
	* issm/trunk-jpl/src/c/modules/GetVectorFromInputsx/GetVectorFromInputsx.h (modified)

	CHG: now possible to retrieve without an vector type.


Sat, 27 May 2017 02:46:51 GMT Eric.Larour [21745]
	* issm/trunk-jpl/src/m/classes/massconaxpby.m (modified)

	CHG: masscon axpby observation enum now a string.


Sat, 27 May 2017 02:46:14 GMT Eric.Larour [21744]
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateOutputDefinitions.cpp (modified)

	CHG: misfit output definitions updated + massconaxpby was not ...


Wed, 24 May 2017 08:57:53 GMT sjohnsen [21743]
	* issm/trunk-jpl/src/m/classes/friction.m (modified)

	CHG: removed comments


Tue, 23 May 2017 21:57:13 GMT Eric.Larour [21742]
	* issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified)

	CHG: shield ensureContiguous statement.


Tue, 23 May 2017 17:12:54 GMT Eric.Larour [21741]
	* issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified)

	CHG: ensure contiguous had to be enabled for the G_elastic and co ...


Tue, 23 May 2017 07:22:34 GMT sjohnsen [21740]
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/ThermalAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Friction.cpp (modified)

	NEW: adding a friction effective pressure flag


Tue, 23 May 2017 07:21:35 GMT sjohnsen [21739]
	* issm/trunk-jpl/src/m/classes/friction.m (modified)
	* issm/trunk-jpl/src/m/classes/friction.py (modified)
	* issm/trunk-jpl/src/m/classes/frictionhydro.m (modified)
	* issm/trunk-jpl/src/m/classes/frictionhydro.py (added)

	NEW: adding a friction effective pressure flag


Tue, 23 May 2017 04:11:02 GMT Eric.Larour [21738]
	* issm/trunk-jpl/src/c/classes/Misfit.h (modified)
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateOutputDefinitions.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/m/classes/misfit.m (modified)

	CHG: introducing new way of computing misfit (local==2) in a ...


Mon, 22 May 2017 21:15:16 GMT Eric.Larour [21737]
	* issm/trunk-jpl/src/m/plot/plot_unit.m (modified)

	CHG: option to plot NaN faces in white instead of transparent.


Mon, 22 May 2017 21:12:22 GMT Eric.Larour [21736]
	* issm/trunk-jpl/src/m/plot/plot_overlay.m (modified)

	CHG: control background to white option.


Fri, 19 May 2017 21:49:08 GMT Mathieu Morlighem [21731]
	* issm/trunk-jpl/configure.ac (modified)

	CHG: update version number


Fri, 19 May 2017 21:48:36 GMT Mathieu Morlighem [21730]
	* issm/trunk-jpl (modified)
	* issm/trunk-jpl/src (modified)
	* issm/trunk-jpl/test (modified)

	Block revision 21729 from being merged into trunk-jpl


Fri, 19 May 2017 21:35:04 GMT Mathieu Morlighem [21728]
	* issm/trunk-jpl (modified)
	* issm/trunk-jpl/externalpackages/mpich/install-3.0-linux64-static.sh (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_static (modified)
	* issm/trunk-jpl/m4/issm_options.m4 (modified)
	* issm/trunk-jpl/packagers/macosx-dakota/package.sh (modified)
	* issm/trunk-jpl/packagers/macosx/package.sh (modified)
	* issm/trunk-jpl/src (modified)
	* issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified)
	* issm/trunk-jpl/test (modified)

	merged trunk and trunk-jpl


Fri, 19 May 2017 21:09:09 GMT Mathieu Morlighem [21725]
	* issm/trunk-jpl/src/m/plot/scaleruler.m (modified)

	CHG: put on top text and bar


Fri, 19 May 2017 21:08:40 GMT Mathieu Morlighem [21724]
	* issm/trunk-jpl/src/m/plot/googlemaps.m (modified)

	CHG: added error message output


Fri, 19 May 2017 20:16:49 GMT Mathieu Morlighem [21723]
	* issm/trunk-jpl/etc/environment.csh (modified)
	* issm/trunk-jpl/etc/environment.sh (modified)

	CHG: cosmetics


Thu, 18 May 2017 21:24:49 GMT jbondzio [21722]
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)

	CHG: minor: removal of superfluous enum and function call


Thu, 18 May 2017 21:11:53 GMT jbondzio [21721]
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Element.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)

	CHG: more consistent treatment of englacial water content drainage


Wed, 17 May 2017 23:15:22 GMT Mathieu Morlighem [21720]
	* issm/trunk-jpl/src/c/classes/Elements/Element.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified)

	CHG: added BasalNodeIndices


Wed, 17 May 2017 20:43:39 GMT Mathieu Morlighem [21719]
	* issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/cores/depthaverage_core.cpp (modified)

	CHG: more elegant way to depth average


Tue, 16 May 2017 23:55:45 GMT jbondzio [21718]
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified)

	CHG: adapting computation of basal melting rate (enthalpy) to higher- ...


Tue, 16 May 2017 23:45:51 GMT Mathieu Morlighem [21717]
	* issm/trunk-jpl/src/c/modules/IoModelToConstraintsx/IoModelToConstraintsx.cpp (modified)

	CHG: added P1xP3 for spc transient


Tue, 16 May 2017 23:11:24 GMT Mathieu Morlighem [21716]
	* issm/trunk-jpl/test/Archives/Archive437.arch (modified)

	CHG: reverted archive now that Johannes is fixing it


Tue, 16 May 2017 23:03:03 GMT Mathieu Morlighem [21715]
	* issm/trunk-jpl/src/c/classes/Elements/PentaRef.cpp (modified)

	CHG: better way of dealing with segments


Tue, 16 May 2017 22:54:22 GMT Mathieu Morlighem [21714]
	* issm/trunk-jpl/src/c/classes/Elements/Element.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/PentaRef.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/PentaRef.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified)

	CHG: added VerticalSegmentsBase


Fri, 12 May 2017 21:49:23 GMT Mathieu Morlighem [21713]
	* issm/trunk-jpl/src/m/plot/plot_manager.m (modified)

	CHG: allow subplotmodel for plotunit


Mon, 08 May 2017 21:40:16 GMT Mathieu Morlighem [21712]
	* issm/trunk-jpl/src/m/classes/SMBd18opdd.py (modified)

	BUG: fixed indentation problems


Mon, 08 May 2017 18:36:28 GMT schlegel [21711]
	* issm/trunk-jpl/src/m/classes/SMBforcing.py (modified)

	CHG: add option for CompressedMat


Mon, 08 May 2017 17:46:29 GMT jcuzzone [21710]
	* issm/trunk-jpl/src/m/classes/SMBd18opdd.m (modified)
	* issm/trunk-jpl/src/m/classes/SMBd18opdd.py (modified)

	NEW: f precipitation temperature scaling factor added


Mon, 08 May 2017 17:43:54 GMT jcuzzone [21709]
	* issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Elements/ComputeD18OTemperaturePrecipitationFromPD.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Elements/elements.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)

	NEW: added f temperature precipitation scaling factor


Sat, 06 May 2017 06:50:08 GMT schlegel [21708]
	* issm/trunk-jpl/src/m/solve/WriteData.py (modified)

	CHG: add CompressedMat to python


Fri, 05 May 2017 11:18:24 GMT tsantos [21707]
	* issm/trunk-jpl/src/m/contrib/tsantos/mismip (added)
	* issm/trunk-jpl/src/m/contrib/tsantos/mismip/MismipGLPosition.m (added)
	* issm/trunk-jpl/src/m/contrib/tsantos/mismip/generate_plot.m (added)
	* issm/trunk-jpl/src/m/contrib/tsantos/mismip/gl_position.m (added)
	* issm/trunk-jpl/src/m/contrib/tsantos/mismip/ice_evolution.m (added)
	* issm/trunk-jpl/src/m/contrib/tsantos/mismip/writeNetCDF.m (added)

	NEW: matlab methods used to MISOMIP/MISMIP+ project, May/2017


Thu, 04 May 2017 22:36:03 GMT schlegel [21706]
	* issm/trunk-jpl/src/c/classes/FemModel.cpp (modified)
	* issm/trunk-jpl/src/c/classes/FemModel.h (modified)

	NEW: add size call to FemModel


Thu, 04 May 2017 21:24:09 GMT Mathieu Morlighem [21705]
	* issm/trunk-jpl/src/m/plot/plot_BC.m (modified)
	* issm/trunk-jpl/src/m/plot/plot_icefront.m (modified)
	* issm/trunk-jpl/src/m/plot/plot_manager.m (modified)

	CHG: allow for layer plot BC


Thu, 04 May 2017 21:13:44 GMT schlegel [21704]
	* issm/trunk-jpl/src/m/solve/WriteData.m (modified)

	CHG: add some checking in compressed mat for the case SMB is nan


Thu, 04 May 2017 21:11:42 GMT schlegel [21703]
	* issm/trunk-jpl/src/c/classes/IoModel.cpp (modified)

	CHG: add option of 10 CompressedMat for a FetchData of a Double
	vector


Thu, 04 May 2017 15:32:27 GMT Mathieu Morlighem [21702]
	* issm/trunk-jpl/src/m/classes/model.m (modified)

	CHG: fixed amr for old models


Thu, 04 May 2017 00:49:42 GMT felicity [21701]
	* issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified)
	* issm/trunk-jpl/src/c/datastructures/DataSet.cpp (modified)

	NEW: ESTAR for inversion capabilities


Thu, 04 May 2017 00:30:39 GMT felicity [21700]
	* issm/trunk-jpl/src/c/classes/Materials/Material.h (modified)
	* issm/trunk-jpl/src/c/classes/Materials/Matestar.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Materials/Matestar.h (modified)
	* issm/trunk-jpl/src/c/classes/Materials/Matice.h (modified)
	* issm/trunk-jpl/src/c/classes/Materials/Matpar.h (modified)

	NEW: ESTAR material functions for inversion capabilities


Wed, 03 May 2017 20:49:34 GMT Eric.Larour [21699]
	* issm/trunk-jpl/src/m/classes/clusters/yellowstone.m (added)

	NEW:  yellowstone cluster class.


Wed, 03 May 2017 18:58:22 GMT jbondzio [21698]
	* issm/trunk-jpl/src/m/mech/drivingstress.m (modified)

	BUG: signum error in directional components of driving stress


Tue, 02 May 2017 23:29:43 GMT Eric.Larour [21697]
	* issm/trunk-jpl/src/m/classes/materials.m (modified)

	CHG: finished first prototype materials.m implementation


Tue, 02 May 2017 22:20:28 GMT Eric.Larour [21696]
	* issm/trunk-jpl/src/m/classes/materials.m (added)

	CHG: new materials class


Mon, 01 May 2017 20:44:53 GMT glperez [21695]
	* issm/trunk-jpl/jenkins/linux64_ross_python (modified)

	CHG: Adding extra MPI lib.


Mon, 01 May 2017 18:53:34 GMT Mathieu Morlighem [21694]
	* issm/trunk-jpl/jenkins/linux64_caladan (modified)
	* issm/trunk-jpl/jenkins/linux64_caladan_ad (modified)
	* issm/trunk-jpl/jenkins/linux64_caladan_ampi (modified)
	* issm/trunk-jpl/jenkins/linux64_ross (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_ad (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_ampi (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_dakota (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_gia (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_iceocean (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_python (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_se (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_static (modified)
	* issm/trunk-jpl/jenkins/linux64_ross_test (modified)
	* issm/trunk-jpl/jenkins/macosx_pine-island (modified)
	* issm/trunk-jpl/jenkins/macosx_pine-island_dakota (modified)
	* issm/trunk-jpl/jenkins/macosx_pine-island_dakota_static (modified)
	* issm/trunk-jpl/jenkins/macosx_pine-island_examples (modified)
	* issm/trunk-jpl/jenkins/macosx_pine-island_static (modified)

	CHG: switching to mpich 3.2 and PETSc 3.7


Mon, 01 May 2017 18:53:24 GMT Mathieu Morlighem [21693]
	* issm/trunk-jpl/externalpackages/mpich/install-3.2-linux64.sh (added)

	CHG: added 3.2 linux64 installation


Mon, 01 May 2017 18:53:21 GMT Mathieu Morlighem [21692]
	* issm/trunk-jpl/externalpackages/mpich/install-3.2-linux64-static.sh (added)
	* issm/trunk-jpl/externalpackages/mpich/install-3.2-macosx64-static.sh (added)
	* issm/trunk-jpl/externalpackages/mpich/install-3.2-macosx64.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-linux64-static.sh (added)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-macosx64-static.sh (added)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-macosx64.sh (modified)

	CHG: added some installation scripts


Mon, 01 May 2017 16:48:18 GMT Mathieu Morlighem [21691]
	* issm/trunk-jpl/externalpackages/valgrind/issm.supp (modified)

	CHG: added more suppressions


Mon, 01 May 2017 16:43:15 GMT Mathieu Morlighem [21690]
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateOutputDefinitions.cpp (modified)

	CHG: fixed memory leak


Wed, 26 Apr 2017 20:35:22 GMT schlegel [21689]
	* issm/trunk-jpl/externalpackages/dakota/install-4.2-pleiades-petsc3.3.sh (deleted)
	* issm/trunk-jpl/externalpackages/dakota/install-4.2-pleiades.sh (deleted)
	* issm/trunk-jpl/externalpackages/dakota/install-5.2-pleiades-petsc3.3.sh (deleted)
	* issm/trunk-jpl/externalpackages/dakota/install-5.3.1-pleiades.sh (deleted)

	CHG: ISSM is only supporting dakota 6.2 on pfe


Wed, 26 Apr 2017 20:34:24 GMT schlegel [21688]
	* issm/trunk-jpl/externalpackages/boost/install-1.55-pleiades.sh (modified)
	* issm/trunk-jpl/externalpackages/boost/install-1.55-pleiades_dakota6.2.sh (deleted)

	CHG: we only need 1 pfe boost install script now


Wed, 26 Apr 2017 18:36:13 GMT schlegel [21687]
	* issm/trunk-jpl/externalpackages/dakota/configs/6.2/CMakeLists.txt.pfe.patch (modified)

	CHG: for SLES12, move dakota to intel mkl


Wed, 26 Apr 2017 18:35:29 GMT schlegel [21686]
	* issm/trunk-jpl/externalpackages/boost/configs/1.55/adl.hpp.lonestar.patch (deleted)
	* issm/trunk-jpl/externalpackages/boost/install-1.55-lonestar.sh (modified)
	* issm/trunk-jpl/externalpackages/boost/install-1.55-pleiades.sh (modified)

	CHG: update boost for SLES12


Wed, 26 Apr 2017 18:32:27 GMT schlegel [21685]
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades_dakota6.2.sh (deleted)

	CHG: update for SLES12


Mon, 24 Apr 2017 16:21:31 GMT Mathieu Morlighem [21684]
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-greenplanet.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-hpc.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-linux64.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-macosx64.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades_dakota6.2.sh (modified)

	CHG: switch to 3.6.6 to fix MacosX problem


Fri, 21 Apr 2017 18:06:42 GMT dlcheng [21683]
	* issm/trunk-jpl/src/m/classes/clusters/generic.js (modified)
	* issm/trunk-jpl/src/m/io/download.js (deleted)
	* issm/trunk-jpl/src/m/io/saveAsFile.js (deleted)
	* issm/trunk-jpl/src/m/plot/applyoptions.js (modified)
	* issm/trunk-jpl/src/m/plot/plot_mesh.js (modified)
	* issm/trunk-jpl/src/m/plot/plot_overlay.js (modified)
	* issm/trunk-jpl/src/m/plot/plot_quiver.js (modified)
	* issm/trunk-jpl/src/m/plot/plot_unit.js (modified)
	* issm/trunk-jpl/src/m/plot/slider.js (modified)
	* issm/trunk-jpl/src/m/plot/webgl.js (modified)

	CHG (JS): js plots code refactoring, texture caching, and more ...


Tue, 18 Apr 2017 21:20:10 GMT Eric.Larour [21682]
	* issm/trunk-jpl/src/m/classes/giacaron.m (modified)

	Erased commented code about inversion


Tue, 18 Apr 2017 20:54:10 GMT caronlam [21681]
	* issm/trunk-jpl/src/m/classes/giacaron.m (modified)

	Updated class file with all input variables


Tue, 18 Apr 2017 19:25:04 GMT tsantos [21680]
	* issm/trunk-jpl/src/c/cores/transient_core.cpp (modified)
	* issm/trunk-jpl/src/m/classes/trans.js (modified)
	* issm/trunk-jpl/src/m/classes/transient.m (modified)
	* issm/trunk-jpl/src/m/classes/transient.py (modified)

	CHG: set 0 to deactivate amr capability. Changes in transient_core to ...


Tue, 18 Apr 2017 18:22:34 GMT tsantos [21679]
	* issm/trunk-jpl/src/m/classes/trans.js (modified)
	* issm/trunk-jpl/src/m/classes/transient.m (modified)
	* issm/trunk-jpl/src/m/classes/transient.py (modified)

	BUG: transient.amr_frequency could not be 0 even in deactivateall and ...


Tue, 18 Apr 2017 17:49:48 GMT tsantos [21678]
	* issm/trunk-jpl/src/m/contrib/tsantos (added)
	* issm/trunk-jpl/src/m/contrib/tsantos/AMRexportVTK.m (added)
	* issm/trunk-jpl/src/m/contrib/tsantos/remesh.m (added)

	NEW: some methods in matlab to deal with AMR capability: remesh and ...


Tue, 18 Apr 2017 17:45:55 GMT tsantos [21677]
	* issm/trunk-jpl/src/c/classes/FemModel.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Materials/Matpar.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Materials/Matpar.h (modified)

	CHG: added SetMid in Matpar class to define mid parameter.


Tue, 18 Apr 2017 17:08:39 GMT Mathieu Morlighem [21676]
	* issm/trunk-jpl/src/m/classes/amr.py (modified)
	* issm/trunk-jpl/src/m/classes/bamgmesh.m (modified)
	* issm/trunk-jpl/src/m/classes/bamgmesh.py (modified)

	CHG: fixing amr indentation


Tue, 18 Apr 2017 17:04:03 GMT tsantos [21675]
	* issm/trunk-jpl/src/m/classes/amr.py (modified)

	BUG: fixed identation.


Tue, 18 Apr 2017 16:23:07 GMT tsantos [21674]
	* issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified)
	* issm/trunk-jpl/src/c/classes/ExternalResults/GenericExternalResult.h (modified)
	* issm/trunk-jpl/src/c/cores/transient_core.cpp (modified)
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/m/classes/amr.js (added)
	* issm/trunk-jpl/src/m/classes/amr.m (added)
	* issm/trunk-jpl/src/m/classes/amr.py (added)
	* issm/trunk-jpl/src/m/classes/model.js (modified)
	* issm/trunk-jpl/src/m/classes/model.m (modified)
	* issm/trunk-jpl/src/m/classes/model.py (modified)
	* issm/trunk-jpl/src/m/classes/trans.js (modified)
	* issm/trunk-jpl/src/m/classes/transient.m (modified)
	* issm/trunk-jpl/src/m/classes/transient.py (modified)
	* issm/trunk-jpl/src/m/solve/parseresultsfrombuffer.js (modified)
	* issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified)
	* issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified)

	CHG: changes to add AMR capability; new class (amr.m) and new results ...


Tue, 18 Apr 2017 16:22:44 GMT Mathieu Morlighem [21673]
	* issm/trunk-jpl/externalpackages/petsc/install-3.6-macosx64.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-greenplanet.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-hpc.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-linux64.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-macosx64.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades_dakota6.2.sh (modified)

	CHG: upgrading to PETSc 3.7.5, since there is a conflict with XCode


Tue, 18 Apr 2017 14:33:24 GMT tsantos [21672]
	* issm/trunk-jpl/src/c/classes/AdaptiveMeshRefinement.cpp (modified)
	* issm/trunk-jpl/src/c/classes/AdaptiveMeshRefinement.h (modified)
	* issm/trunk-jpl/src/c/classes/FemModel.cpp (modified)
	* issm/trunk-jpl/src/c/classes/FemModel.h (modified)

	CHG: AMR improved (faster), inserted methods to run the Mismip+ ...


Wed, 12 Apr 2017 23:35:34 GMT Mathieu Morlighem [21671]
	* issm/trunk-jpl/externalpackages/export_fig/eps2pdf.m (modified)
	* issm/trunk-jpl/externalpackages/export_fig/export_fig.m (modified)
	* issm/trunk-jpl/externalpackages/export_fig/pdftops.m (modified)
	* issm/trunk-jpl/externalpackages/export_fig/print2array.m (modified)
	* issm/trunk-jpl/externalpackages/export_fig/print2eps.m (modified)

	CHG: updated export_fig


Wed, 12 Apr 2017 22:53:05 GMT Mathieu Morlighem [21670]
	* issm/trunk-jpl/src/m/classes/thermal.m (modified)

	CHG: allow for P1xP3


Wed, 12 Apr 2017 22:52:48 GMT Mathieu Morlighem [21669]
	* issm/trunk-jpl/src/c/analyses/LevelsetAnalysis.cpp (modified)

	CHG: minor


Wed, 12 Apr 2017 22:49:49 GMT Mathieu Morlighem [21668]
	* issm/trunk-jpl/src/c/classes/IoModel.cpp (modified)
	* issm/trunk-jpl/src/m/classes/SMBforcing.m (modified)
	* issm/trunk-jpl/src/m/solve/WriteData.m (modified)

	NEW: new marshall format for SMB using uint8


Mon, 10 Apr 2017 21:10:15 GMT jbondzio [21667]
	* issm/trunk-jpl/src/m/classes/model.m (modified)

	CHG: convert gia to giaivins automatically


Fri, 07 Apr 2017 22:25:20 GMT Mathieu Morlighem [21666]
	* issm/trunk-jpl/configs/config-ios-armv7.sh (deleted)
	* issm/trunk-jpl/configs/config-ios-armv7s.sh (deleted)
	* issm/trunk-jpl/configs/config-ios-linux.sh (deleted)
	* issm/trunk-jpl/configs/config-ios-simulator.sh (deleted)
	* issm/trunk-jpl/configs/config-pleiades-petsc3.4.sh (deleted)
	* issm/trunk-jpl/configs/config-win10.sh (deleted)
	* issm/trunk-jpl/configs/configure.sh (deleted)

	CHG: removing some OLD configure scripts


Fri, 07 Apr 2017 22:17:38 GMT schlegel [21665]
	* issm/trunk-jpl/externalpackages/petsc/install-3.6-pleiades.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades.sh (modified)
	* issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades_dakota6.2.sh (added)

	CHG: upgrade pfe to Compiler/2016.2.181 and mpi to mpi-sgi/mpt


Fri, 07 Apr 2017 22:05:44 GMT schlegel [21664]
	* issm/trunk-jpl/src/m/classes/clusters/pfe.m (modified)

	CHG: update to new compiler and generic mpi-sgi


Thu, 06 Apr 2017 20:15:27 GMT Mathieu Morlighem [21662]
	* issm/trunk-jpl/src/m/qmu/dakota_out_parse.m (modified)

	CHG: define nfeval if early return


Wed, 05 Apr 2017 17:04:51 GMT seroussi [21661]
	* issm/trunk-jpl/src/m/classes/linearbasalforcings.m (modified)
	* issm/trunk-jpl/src/m/classes/linearbasalforcings.py (modified)

	FIX: upperwater elevation can be equal to 0 (surface)


Tue, 04 Apr 2017 19:01:06 GMT seroussi [21660]
	* issm/trunk-jpl/test/Archives/Archive437.arch (modified)

	BUG: updated archive


Tue, 04 Apr 2017 12:29:54 GMT bdef [21659]
	* issm/trunk-jpl/src/m/shp/shp2exp.py (modified)

	BUG: fixing indentation


Tue, 04 Apr 2017 12:12:42 GMT bdef [21658]
	* issm/trunk-jpl/etc/environment.sh (modified)
	* issm/trunk-jpl/externalpackages/valgrind/install-linux64.sh (modified)
	* issm/trunk-jpl/m4/analyses.m4 (modified)

	Rolling back after miss-comit


Tue, 04 Apr 2017 12:04:06 GMT bdef [21657]
	* issm/trunk-jpl/etc/environment.sh (modified)
	* issm/trunk-jpl/externalpackages/valgrind/install-linux64.sh (modified)
	* issm/trunk-jpl/m4/analyses.m4 (modified)
	* issm/trunk-jpl/src/m/io/loadvars.py (modified)
	* issm/trunk-jpl/test/Par/SquareSheetConstrained.py (modified)

	CHG: adding case in load for future matlab compatibility


Tue, 04 Apr 2017 11:53:50 GMT bdef [21656]
	* issm/trunk-jpl/src/m/plot/plot_BC.py (modified)

	NEW: adding hydrology spc to BC plot


Tue, 04 Apr 2017 00:28:19 GMT schlegel [21655]
	* issm/trunk-jpl/src/m/contrib/defleurian/netCDF/read_netCDF.m (modified)

	CHG: matlab read works for all but requestedoutput outputdefinition ...


Mon, 03 Apr 2017 21:01:06 GMT schlegel [21654]
	* issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified)

	CHG: Adding some more enums for Dakota


Thu, 30 Mar 2017 22:44:40 GMT jbondzio [21653]
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified)

	CHG: fixing one P1-specific code


Thu, 30 Mar 2017 17:53:50 GMT Mathieu Morlighem [21652]
	* issm/trunk-jpl/src/m/exp/exp2shp.m (modified)

	CHG: pass exp as first argument + added check on extension


Thu, 30 Mar 2017 17:27:08 GMT Mathieu Morlighem [21651]
	* issm/trunk-jpl/src/m/shp/shp2exp.m (modified)

	CHG: pass shp as first argument + added check on extension


Thu, 30 Mar 2017 16:32:00 GMT bdef [21650]
	* issm/trunk-jpl/src/m/classes/esa.py (modified)

	BUG: fixing NaN in default parameters


Thu, 30 Mar 2017 15:54:17 GMT bdef [21649]
	* issm/trunk-jpl/src/m/classes/esa.py (modified)

	BUG: bad import (and not needed)


Thu, 30 Mar 2017 15:35:47 GMT schlegel [21648]
	* issm/trunk-jpl/src/m/contrib/defleurian/netCDF/export_netCDF.m (modified)

	CHG: Add code for transient results


Thu, 30 Mar 2017 13:36:17 GMT schlegel [21647]
	* issm/trunk-jpl/src/m/contrib/defleurian/netCDF/export_netCDF.m (modified)

	CHG: remove results special case


Thu, 30 Mar 2017 09:30:03 GMT schlegel [21646]
	* issm/trunk-jpl/src/m/solve/WriteData.py (modified)

	BUG: Does python even need this?


Thu, 30 Mar 2017 09:27:52 GMT schlegel [21645]
	* issm/trunk-jpl/src/m/contrib/defleurian/netCDF/export_netCDF.m (modified)

	CHG: add output definitions


Thu, 30 Mar 2017 09:04:17 GMT bdef [21644]
	* issm/trunk-jpl/src/m/contrib/defleurian/netCDF/export_netCDF.py (modified)

	CHG:removing useless code in python export


Wed, 29 Mar 2017 17:20:21 GMT schlegel [21643]
	* issm/trunk-jpl/src/m/contrib/defleurian/netCDF/export_netCDF.m (modified)

	CHG: update to fix requested_outputs