# # ChangeLog for / # # Generated by Trac 1.6 # Sep 22, 2026, 3:06:37 PM Thu, 31 Aug 2023 20:08:49 GMT jdquinn [27893] * issm/trunk-jpl/jenkins/ross-debian_linux-iceocean (modified) CHG: Reducing Ice/Ocean test suite for now Thu, 31 Aug 2023 20:05:49 GMT seroussi [27892] * issm/trunk-jpl/jenkins/ross-debian_linux-iceocean (modified) CHG: only test 4001 in ice-ocean until coupling is fixed Wed, 30 Aug 2023 22:57:16 GMT musselman [27891] * issm/trunk-jpl/src/m/netcdf (added) * issm/trunk-jpl/src/m/netcdf/README.txt (added) * issm/trunk-jpl/src/m/netcdf/read_netCDF.m (added) * issm/trunk-jpl/src/m/netcdf/read_netCDF.py (added) * issm/trunk-jpl/src/m/netcdf/write_netCDF.m (added) * issm/trunk-jpl/src/m/netcdf/write_netCDF.py (added) ADD: read/write_netCDF for python and matlab. README.txt is ... Wed, 30 Aug 2023 22:32:53 GMT jdquinn [27890] * issm/trunk-jpl/src/m/contrib/defleurian/netCDF (moved) CHG: Moving Basile’s netCDF classes back to their contrib directory ... Wed, 30 Aug 2023 22:08:57 GMT musselman [27889] * issm/trunk/src/m/contrib/musselman/README.txt (modified) * issm/trunk/src/m/contrib/musselman/read_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/read_netCDF.py (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF.py (modified) Removed global vars from all files. Updated read log statements to ... Wed, 30 Aug 2023 16:20:32 GMT musselman [27888] * issm/trunk/src/m/contrib/musselman/HEDUnet_filter_plots.ipynb (added) ADD: Jupyter Notebook for extracting filters from each layer of ... Thu, 24 Aug 2023 00:59:34 GMT musselman [27887] * issm/trunk/src/m/contrib/musselman/README.txt (modified) Added documentation recording known limitations of read/write_netCDF ... Wed, 23 Aug 2023 18:22:50 GMT Cheng Gong [27886] * issm/trunk-jpl/src/m/classes/clusters/discovery.m (modified) ADD:deleteckptdata option in md.cluster, to delete *.ckpt and *.rst ... Wed, 23 Aug 2023 17:37:09 GMT musselman [27885] * issm/trunk/src/m/contrib/musselman/README.txt (added) ADD: Readme documentation/ user guide for read/write_netCDF suite. Wed, 23 Aug 2023 00:37:20 GMT musselman [27884] * issm/trunk/src/m/contrib/musselman/read_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/read_netCDF.py (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF.py (modified) Added 'verbose' argument to all files. Argument is T/F and acts as an ... Tue, 22 Aug 2023 19:53:37 GMT musselman [27883] * issm/trunk/src/m/classes/love.m (modified) * issm/trunk/src/m/classes/stressbalance.py (modified) Removed attribute 'icefront' from class stressbalance.py as it is ... Tue, 22 Aug 2023 17:43:35 GMT musselman [27882] * issm/trunk/src/m/contrib/musselman/read_netCDF.py (added) * issm/trunk/src/m/contrib/musselman/read_netCDF_beta.py (deleted) * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (deleted) * issm/trunk/src/m/contrib/musselman/write_netCDF.py (added) * issm/trunk/src/m/contrib/musselman/write_netCDF_beta.py (deleted) * issm/trunk/src/m/contrib/musselman/write_netCDF_commit.py (deleted) Streamlined write_netCDF.py to be more computationally efficient. Fri, 18 Aug 2023 20:21:17 GMT musselman [27881] * issm/trunk/src/m/contrib/musselman/write_netCDF_commit.py (modified) Added support for results.solution.steps objects and for lists of ... Thu, 17 Aug 2023 17:06:39 GMT musselman [27880] * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (modified) Added type recognition for integers in read_netCDF_commit.py Thu, 17 Aug 2023 15:17:34 GMT Mathieu Morlighem [27879] * issm/trunk-jpl/etc/environment.sh (modified) BUG: do not change MPI_ROOT, it changes env variables on pleiades Thu, 17 Aug 2023 04:26:04 GMT musselman [27878] * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (modified) Added functionality to read_netCDF_commit.py to handle ... Wed, 16 Aug 2023 17:34:25 GMT musselman [27877] * issm/trunk/src/m/contrib/musselman/read_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF.m (modified) Streamlined some code in both scripts. Added functionality for ... Mon, 14 Aug 2023 17:05:12 GMT Mathieu Morlighem [27876] * issm/trunk-jpl/src/c/modules/DragCoefficientAbsGradientx/DragCoefficientAbsGradientx.cpp (modified) CHG: minor Fri, 11 Aug 2023 01:34:53 GMT musselman [27875] * issm/trunk/src/m/contrib/musselman/read_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF.m (modified) Added support in matlab read/write_netCDF files for multidimensional ... Tue, 08 Aug 2023 18:26:37 GMT musselman [27874] * issm/trunk/src/m/contrib/musselman/read_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF.m (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF_commit.py (modified) Fixed bugs so that read/write files function interchangeably on ... Tue, 08 Aug 2023 15:24:08 GMT vverjans [27873] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/test/Archives/Archive257.arch (modified) BUG: fixing identification of basin for SMB lapse rates Thu, 03 Aug 2023 10:47:24 GMT seroussi [27872] * issm/trunk-jpl/src/m/classes/transient.py (modified) FIX: typo Thu, 03 Aug 2023 09:27:17 GMT seroussi [27871] * issm/trunk-jpl/src/m/classes/transient.m (modified) * issm/trunk-jpl/src/m/classes/transient.py (modified) CHG: matlab/python change for isoceancoupling Thu, 03 Aug 2023 09:26:03 GMT seroussi [27870] * issm/trunk-jpl/test/NightlyRun/test4002.m (modified) * issm/trunk-jpl/test/NightlyRun/test4003.m (modified) * issm/trunk-jpl/test/NightlyRun/test4004.m (modified) CHG: isoceancoupling=2 for lat/long coordinates Thu, 03 Aug 2023 09:23:06 GMT seroussi [27869] * issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified) * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateElementsVerticesAndMaterials.cpp (modified) * issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified) CHG: updated MITgcm coupling to allow cartesian and polar coordinates Wed, 02 Aug 2023 21:31:17 GMT musselman [27868] * issm/trunk/src/m/contrib/musselman/write_netCDF.m (added) ADD: write_netCDF.m is the matlab version of write_netCDF.py. This ... Tue, 01 Aug 2023 19:01:24 GMT jdquinn [27867] * issm/trunk-jpl/externalpackages/dakota/install-6.2-mac.sh (modified) BUG: Add libgfortran parent directory to rpath for certain Dakota ... Tue, 01 Aug 2023 03:41:23 GMT jdquinn [27866] * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) * issm/trunk-jpl/src/wrappers/python/Makefile.am (modified) CHG: Reverting last change as it does not resolve the issue with ... Mon, 31 Jul 2023 21:25:35 GMT jdquinn [27865] * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) * issm/trunk-jpl/src/wrappers/python/Makefile.am (modified) BUG: Add supplied location of libgfortran to wrappers under macOS Mon, 31 Jul 2023 17:31:28 GMT musselman [27864] * issm/trunk/src/m/contrib/musselman/read_netCDF.m (modified) read_netCDF.m: Removed some log statements, added some comments ... Mon, 31 Jul 2023 16:29:33 GMT vverjans [27863] * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enumjl.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: reordering some enums Sat, 29 Jul 2023 13:15:00 GMT vverjans [27862] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) CHG: ARMA process should start from starttime and not from 0 Thu, 27 Jul 2023 17:32:21 GMT vverjans [27861] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: adding case for levelset==0 at a vertex in GetIcefrontArea() Thu, 27 Jul 2023 00:49:42 GMT musselman [27860] * issm/trunk/src/m/contrib/musselman/read_netCDF.m (added) ADD: read_netCDF.m populates a model() variable with data from ... Thu, 27 Jul 2023 00:09:27 GMT musselman [27859] * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF_commit.py (modified) Added inversion/m1qn3inversion/taoinversion class compatibility to ... Wed, 26 Jul 2023 19:04:55 GMT musselman [27858] * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF_commit.py (modified) Modified read/write_netCDF_commit.py files to work with bool/numpy ... Wed, 26 Jul 2023 16:49:30 GMT rueckamp [27857] * issm/trunk-jpl/src/m/classes/SMBdebrisEvatt.m (modified) CHG: renaming some fields Wed, 26 Jul 2023 16:41:33 GMT rueckamp [27856] * issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.h (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enumjl.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified) CHG: Replace SMBdebrisML with SMBdebrisEvatt; adding new options for ... Wed, 26 Jul 2023 15:56:26 GMT jdquinn [27855] * issm/trunk-jpl/src/m/classes/debris.m (modified) * issm/trunk-jpl/src/m/classes/debris.py (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified) CHG: MATLAB -> Python; clean up Wed, 26 Jul 2023 08:35:20 GMT rueckamp [27854] * issm/trunk-jpl/src/m/classes/SMBdebrisEvatt.m (modified) CHG: renaming some fields in SMBdebrisEvatt Wed, 26 Jul 2023 08:20:28 GMT rueckamp [27853] * issm/trunk-jpl/src/m/classes/debris.m (modified) * issm/trunk-jpl/src/m/classes/model.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) CHG: Adding some options for Debris Analysis Tue, 25 Jul 2023 06:49:48 GMT rueckamp [27852] * issm/trunk-jpl/src/c/analyses/DebrisAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/cores/debris_core.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.h (modified) * issm/trunk-jpl/src/c/modules/modules.h (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enumjl.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified) * issm/trunk-jpl/src/m/classes/debris.m (modified) * issm/trunk-jpl/src/m/classes/model.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) CHG: revert to revision 27846 Mon, 24 Jul 2023 15:28:24 GMT rueckamp [27851] * issm/trunk-jpl/src/c/Makefile.am (modified) CHG: exclude ComputeMeanEla which is corrupt Mon, 24 Jul 2023 14:30:19 GMT rueckamp [27850] * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) CHG: exclude ComputeMeanEla which is corrupt Mon, 24 Jul 2023 14:07:35 GMT rueckamp [27849] * issm/trunk-jpl/src/c/modules/modules.h (modified) CHG: exclude ComputeMeanEla which is corrupt Mon, 24 Jul 2023 14:01:22 GMT rueckamp [27848] * issm/trunk-jpl/src/c/cores/debris_core.cpp (modified) CHG: exclude ComputeMeanEla which is corrupt Mon, 24 Jul 2023 12:33:26 GMT rueckamp [27847] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/analyses/DebrisAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/cores/debris_core.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.h (modified) * issm/trunk-jpl/src/c/modules/modules.h (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enumjl.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified) * issm/trunk-jpl/src/m/classes/SMBdebrisEvatt.m (added) * issm/trunk-jpl/src/m/classes/debris.m (modified) * issm/trunk-jpl/src/m/classes/model.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) CHG: Several imprvements to Debris analysis Sat, 22 Jul 2023 21:41:04 GMT jdquinn [27846] * issm/trunk-jpl/src/m/classes/initialization.py (modified) CHG: More clean up Sat, 22 Jul 2023 21:39:45 GMT jdquinn [27845] * issm/trunk-jpl/jenkins/mac-silicon-solid_earth (modified) * issm/trunk-jpl/src/c/shared/Exp/exp.h (modified) * issm/trunk-jpl/src/m/classes/mesh2d.m (modified) * issm/trunk-jpl/src/m/classes/mesh2d.py (modified) * issm/trunk-jpl/src/m/mesh/roundmesh.m (modified) * issm/trunk-jpl/src/m/mesh/roundmesh.py (modified) * issm/trunk-jpl/src/m/mesh/triangle.py (modified) CHG: Excluding failing tests until MEX files can be compiled natively ... Thu, 20 Jul 2023 20:00:30 GMT vverjans [27844] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) BUG arma timestepping should start at starttime and not at 0 Thu, 20 Jul 2023 18:36:48 GMT jdquinn [27843] * issm/trunk-jpl/src/m/mesh/roundmesh.m (modified) * issm/trunk-jpl/src/m/mesh/roundmesh.py (modified) CHG: Bad commit Thu, 20 Jul 2023 18:28:50 GMT jdquinn [27842] * issm/trunk-jpl/src/m/mesh/roundmesh.py (modified) CHG: Bad commit Thu, 20 Jul 2023 18:25:51 GMT jdquinn [27841] * issm/trunk-jpl/src/m/mesh/roundmesh.m (modified) * issm/trunk-jpl/src/m/mesh/roundmesh.py (modified) * issm/trunk-jpl/src/m/miscellaneous/MatlabFuncs.py (modified) * issm/trunk-jpl/src/wrappers/Triangle/Triangle.h (modified) CHG: MATLAB -> Python; cleanup Thu, 20 Jul 2023 08:42:35 GMT Mathieu Morlighem [27840] * issm/trunk-jpl/src/m/Makefile.am (modified) CHG: adding modeldata to Makefile.am Wed, 19 Jul 2023 20:46:00 GMT jdquinn [27839] * issm/trunk-jpl/scripts/BinRead.py (modified) * issm/trunk-jpl/src/m/classes/initialization.m (modified) * issm/trunk-jpl/test/NightlyRun/test2010.py (modified) CHG: initialization.age was not being marshalled; cleanup Wed, 19 Jul 2023 17:40:00 GMT musselman [27838] * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (modified) * issm/trunk/src/m/contrib/musselman/write_netCDF_commit.py (modified) write_netCDF.py: modified an exception statement to pass an expected ... Wed, 19 Jul 2023 03:14:26 GMT jdquinn [27837] * issm/trunk-jpl/externalpackages/gmt/configs/6 (moved) * issm/trunk-jpl/externalpackages/gmt/configs/6/mac/cmake/modules (added) * issm/trunk-jpl/externalpackages/gmt/configs/6/mac/cmake/modules/ConfigCMake.cmake (added) * issm/trunk-jpl/externalpackages/gmt/install-6-linux-static.sh (modified) * issm/trunk-jpl/externalpackages/gmt/install-6-linux.sh (modified) * issm/trunk-jpl/externalpackages/gmt/install-6-mac-static.sh (modified) * issm/trunk-jpl/externalpackages/gmt/install-6-mac.sh (modified) BUG: Modifying RPATH so that libgfortran is findable by gmt binary Wed, 19 Jul 2023 00:36:04 GMT musselman [27836] * issm/trunk/src/m/contrib/musselman (added) * issm/trunk/src/m/contrib/musselman/read_netCDF_beta.py (added) * issm/trunk/src/m/contrib/musselman/read_netCDF_commit.py (added) * issm/trunk/src/m/contrib/musselman/write_netCDF_beta.py (added) * issm/trunk/src/m/contrib/musselman/write_netCDF_commit.py (added) Added functionality to create subclass instances in results class ... Tue, 18 Jul 2023 23:12:37 GMT musselman [27835] * issm/trunk-jpl/src/m/contrib/musselman/README.txt (added) ADD: Documentation for write_netCDF and read_netCDF functions. Tue, 18 Jul 2023 23:04:30 GMT musselman [27834] * issm/trunk-jpl/src/m/contrib/musselman/write_netCDF_commit.py (modified) Added functionality to store subclass instances of the results class ... Tue, 18 Jul 2023 21:46:16 GMT jdquinn [27833] * issm/trunk-jpl/externalpackages/gmsh/configs/4.10.5/mac (added) * issm/trunk-jpl/externalpackages/gmsh/configs/4.10.5/mac/CMakeLists.txt.patch (added) * issm/trunk-jpl/externalpackages/gmsh/install-4-mac.sh (modified) BUG: Modifying RPATH so that libgfortran is findable by gmsh binary Tue, 18 Jul 2023 20:07:22 GMT musselman [27832] * issm/trunk-jpl/src/m/contrib/musselman/read_netCDF_commit.py (modified) * issm/trunk-jpl/src/m/contrib/musselman/write_netCDF_beta.py (modified) * issm/trunk-jpl/src/m/contrib/musselman/write_netCDF_commit.py (modified) CHG: updating to 07-11 versions of musselman netcdf. Tue, 18 Jul 2023 20:06:27 GMT musselman [27831] * issm/trunk-jpl/src/m/contrib/musselman (added) * issm/trunk-jpl/src/m/contrib/musselman/read_netCDF_beta.py (added) * issm/trunk-jpl/src/m/contrib/musselman/read_netCDF_commit.py (added) * issm/trunk-jpl/src/m/contrib/musselman/write_netCDF_beta.py (added) * issm/trunk-jpl/src/m/contrib/musselman/write_netCDF_commit.py (added) ADD: musselman netcdf files. Mon, 17 Jul 2023 20:44:11 GMT jdquinn [27830] * issm/trunk-jpl/src/m/classes/SMBsemic.py (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified) * issm/trunk-jpl/test/NightlyRun/test541.m (modified) * issm/trunk-jpl/test/NightlyRun/test541.py (modified) CHG: MATLAB -> Python; eased tolerances Mon, 17 Jul 2023 01:22:25 GMT inwoo [27829] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/classes/Regionaloutput.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enumjl.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/SMBsemic.m (modified) * issm/trunk-jpl/src/m/solve/outbinread.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) CHG: add calculation of TotalSmbMelt and TotalSmbRefreeze for SEMIC. Fri, 14 Jul 2023 18:28:42 GMT Cheng Gong [27828] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: set the calving rate for CalvingMIP EXP4 as a function of time Fri, 14 Jul 2023 17:23:43 GMT jdquinn [27827] * issm/trunk-jpl/externalpackages/m1qn3/install.sh (modified) CHG: Removing fcheck flag Fri, 14 Jul 2023 02:26:12 GMT inwoo [27826] * issm/trunk-jpl/src/m/classes/SMBsemic.m (modified) * issm/trunk-jpl/src/m/classes/SMBsemic.py (modified) BUG: fix minor. Thu, 13 Jul 2023 12:07:48 GMT inwoo [27825] * issm/trunk-jpl/src/m/geometry/VolumeAboveFloatation.py (modified) FIX: fix minor. Thu, 13 Jul 2023 09:01:17 GMT inwoo [27824] * issm/trunk-jpl/src/m/geometry/VolumeAboveFloatation.py (added) CHG: MATLAB > PYTHON: VolumeAboveFloatation Wed, 12 Jul 2023 18:28:44 GMT jdquinn [27823] * issm/trunk-jpl/packagers/linux/package-issm-linux-binaries-python-3.sh (modified) * issm/trunk-jpl/packagers/mac/package-issm-mac-binaries-python-3.sh (modified) CHG: Do not precompile Python scripts Tue, 11 Jul 2023 21:05:03 GMT Mathieu Morlighem [27822] * issm/trunk-jpl/src/c/classes/Inputs/TransientInput.cpp (modified) BUG: fixed problem with adaptive time stepping and cycling Sat, 08 Jul 2023 14:32:44 GMT vverjans [27821] * issm/trunk-jpl/src/m/classes/stochasticforcing.m (modified) CHG: minor fix in warning call Mon, 03 Jul 2023 19:54:20 GMT Cheng Gong [27820] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) BUG: convert time using yts in CalvingMIP EXP4 Sat, 01 Jul 2023 02:19:51 GMT seroussi [27819] * issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified) FIX: ocean time exchange was twice in data Sat, 01 Jul 2023 01:10:25 GMT seroussi [27818] * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) * issm/trunk-jpl/src/c/modules/InputUpdateFromConstantx/InputUpdateFromConstantx.cpp (modified) * issm/trunk-jpl/src/c/modules/InputUpdateFromConstantx/InputUpdateFromConstantx.h (modified) * issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified) NEW: changing coupling scheme Fri, 30 Jun 2023 22:32:51 GMT seroussi [27817] * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) NEW: ice-ocean coupling calculated dynamic thickness and rerun mass ... Fri, 30 Jun 2023 22:30:45 GMT seroussi [27816] * issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified) FIX: send dyn. thickness before receiving melt Fri, 30 Jun 2023 22:25:38 GMT seroussi [27815] * issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified) FIX: change time in steps but not init Fri, 30 Jun 2023 21:01:03 GMT seroussi [27814] * issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified) CHG: exchanging ice mass instead of ice base elevation for ocean model Fri, 30 Jun 2023 20:31:24 GMT seroussi [27813] * issm/trunk-jpl/src/c/classes/Vertices.cpp (modified) * issm/trunk-jpl/src/c/classes/Vertices.h (modified) NEW: added function to get list of x and y coordinates Fri, 30 Jun 2023 20:30:35 GMT seroussi [27812] * issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified) FIX: temporary fix for ocean coupling in cartesian coordinates Tue, 27 Jun 2023 00:49:07 GMT jdquinn [27811] * issm/trunk-jpl/test/NightlyRun/test2071.m (modified) * issm/trunk-jpl/test/NightlyRun/test2072.m (modified) * issm/trunk-jpl/test/NightlyRun/test2101.m (modified) * issm/trunk-jpl/test/NightlyRun/test2101.py (modified) * issm/trunk-jpl/test/NightlyRun/test2110.m (modified) * issm/trunk-jpl/test/NightlyRun/test2110.py (modified) * issm/trunk-jpl/test/NightlyRun/test2111.m (modified) * issm/trunk-jpl/test/NightlyRun/test2111.py (modified) * issm/trunk-jpl/test/NightlyRun/test2112.m (modified) * issm/trunk-jpl/test/NightlyRun/test2112.py (modified) * issm/trunk-jpl/test/NightlyRun/test2113.m (modified) * issm/trunk-jpl/test/NightlyRun/test2113.py (modified) CHG: Eased tolerances Mon, 26 Jun 2023 22:17:07 GMT jdquinn [27810] * issm/trunk-jpl/jenkins/mac-silicon-basic (modified) * issm/trunk-jpl/jenkins/mac-silicon-dakota (modified) * issm/trunk-jpl/jenkins/mac-silicon-examples (modified) * issm/trunk-jpl/jenkins/mac-silicon-full (modified) * issm/trunk-jpl/jenkins/mac-silicon-solid_earth (modified) CHG: Lowering num CPUs for compile to avoid resource starvation Mon, 26 Jun 2023 21:07:28 GMT jdquinn [27809] * issm/trunk-jpl/jenkins/mac-silicon-solid_earth (copied) CHG: New build script Mon, 26 Jun 2023 20:46:26 GMT jdquinn [27808] * issm/trunk-jpl/test/NightlyRun/test244.m (modified) * issm/trunk-jpl/test/NightlyRun/test244.py (modified) CHG: Eased tolerances Mon, 26 Jun 2023 20:29:34 GMT jdquinn [27807] * issm/trunk-jpl/jenkins/aws-amazon_linux-solid_earth (modified) * issm/trunk-jpl/jenkins/mac-intel-basic (modified) * issm/trunk-jpl/jenkins/mac-intel-binaries-matlab (modified) * issm/trunk-jpl/jenkins/mac-intel-dakota (modified) * issm/trunk-jpl/jenkins/mac-intel-examples (modified) * issm/trunk-jpl/jenkins/mac-intel-full (modified) * issm/trunk-jpl/jenkins/mac-intel-solid_earth (modified) * issm/trunk-jpl/jenkins/mac-silicon-basic (modified) * issm/trunk-jpl/jenkins/mac-silicon-dakota (modified) * issm/trunk-jpl/jenkins/mac-silicon-examples (modified) * issm/trunk-jpl/jenkins/mac-silicon-full (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-adolc-ampioff (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-adolc-ampion (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-basic (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries-matlab (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-codipack (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-full (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-full-mplapack (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-full-valgrind (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-gia (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-iceocean (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-python (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-win-msys2-gcc-msmpi-basic (modified) CHG: Cleanup Mon, 26 Jun 2023 20:10:50 GMT jdquinn [27806] * issm/trunk-jpl/jenkins/mac-silicon-dakota (modified) CHG: Updated path to libgfortran Mon, 26 Jun 2023 19:55:21 GMT jdquinn [27805] * issm/trunk-jpl/externalpackages/petsc/install-3.17-mac-silicon-static.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.17-mac-silicon.sh (modified) * issm/trunk-jpl/jenkins/mac-intel-basic (modified) * issm/trunk-jpl/jenkins/mac-silicon-basic (modified) CHG: Updated path to libgfortran; flags Mon, 26 Jun 2023 17:24:47 GMT jdquinn [27804] * issm/trunk-jpl/externalpackages/m1qn3/install.sh (modified) * issm/trunk-jpl/externalpackages/semic/install.sh (modified) CHG: Updated install scripts to handle new Mac architectures Mon, 26 Jun 2023 07:48:58 GMT jdquinn [27803] * issm/trunk-jpl/jenkins/mac-silicon-basic (modified) CHG: Another exclusion Mon, 26 Jun 2023 06:30:27 GMT jdquinn [27802] * issm/trunk-jpl/jenkins/mac-silicon-basic (modified) CHG: Correct path to libgfortran Mon, 26 Jun 2023 06:27:47 GMT jdquinn [27801] * issm/trunk-jpl/jenkins/mac-silicon-basic (modified) CHG: Correct path to libgfortran Mon, 26 Jun 2023 03:45:18 GMT jdquinn [27800] * issm/trunk-jpl/jenkins/mac-silicon-basic (modified) * issm/trunk-jpl/test/NightlyRun/test517.m (modified) * issm/trunk-jpl/test/NightlyRun/test517.py (modified) * issm/trunk-jpl/test/NightlyRun/test540.m (modified) * issm/trunk-jpl/test/NightlyRun/test540.py (modified) CHG: Excluding failing tests from macOS Silicon basic build for now. Thu, 22 Jun 2023 20:51:39 GMT jdquinn [27799] * issm/trunk-jpl/src/m/mesh/triangle.m (modified) * issm/trunk-jpl/src/m/mesh/triangle.py (modified) BUG: MATLAB -> Python (orphan culling); clean up Thu, 22 Jun 2023 19:29:24 GMT Cheng Gong [27798] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: calving law for CalvingMIP can run the whole EXP4 in one ... Wed, 21 Jun 2023 21:23:42 GMT Cheng Gong [27797] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/m/classes/calvingcalvingmip.m (modified) ADD: CalvingMIP Exp 2 and 4, second half with no calving, use ... Wed, 21 Jun 2023 19:55:54 GMT jdquinn [27796] * issm/trunk-jpl/src/m/contrib/buzzi/gravity/vfsa.cpp (modified) * issm/trunk-jpl/src/m/contrib/larour/mdanalysis.m (modified) * issm/trunk-jpl/src/m/mech/basalstress.m (modified) * issm/trunk-jpl/src/m/modeldata/InterpFromGrid.cpp (modified) * issm/trunk-jpl/src/m/parameterization/parameterize.m (modified) * issm/trunk-jpl/src/m/parameterization/parameterize.py (modified) * issm/trunk-jpl/src/wrappers/BamgMesher/BamgMesher.cpp (modified) * issm/trunk-jpl/src/wrappers/BamgMesher/BamgMesher.js (modified) * issm/trunk-jpl/src/wrappers/Chaco/Chaco.cpp (modified) * issm/trunk-jpl/src/wrappers/ContourToMesh/ContourToMesh.js (modified) * issm/trunk-jpl/src/wrappers/DistanceToMaskBoundary/DistanceToMaskBoundary.cpp (modified) * issm/trunk-jpl/src/wrappers/ElementConnectivity/ElementConnectivity.js (modified) * issm/trunk-jpl/src/wrappers/InterpFromMeshToGrid/InterpFromMeshToGrid.cpp (modified) * issm/trunk-jpl/src/wrappers/InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.js (modified) * issm/trunk-jpl/src/wrappers/IssmConfig/IssmConfig.js (modified) * issm/trunk-jpl/src/wrappers/Kriging/Kriging.cpp (modified) * issm/trunk-jpl/src/wrappers/MeshPartition/MeshPartition.cpp (modified) * issm/trunk-jpl/src/wrappers/NodeConnectivity/NodeConnectivity.js (modified) * issm/trunk-jpl/src/wrappers/PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.cpp (modified) * issm/trunk-jpl/src/wrappers/Triangle/Triangle.cpp (modified) * issm/trunk-jpl/src/wrappers/Triangle/Triangle.js (modified) * issm/trunk-jpl/src/wrappers/matlab/io/WriteMatlabData.cpp (modified) CHG: Typos; cleanup Wed, 21 Jun 2023 19:51:15 GMT jdquinn [27795] * issm/trunk-jpl/src/c/analyses/DebrisAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/cores/debris_core.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateOutputDefinitions.cpp (modified) CHG: Typo Wed, 21 Jun 2023 16:24:03 GMT Mathieu Morlighem [27794] * issm/trunk-jpl/src/c/analyses/HydrologyShreveAnalysis.cpp (modified) BUG: was not pulling the right field