# # ChangeLog for / # # Generated by Trac 1.4.3 # 04/28/25 12:21:13 Thu, 29 Oct 2020 21:30:20 GMT Mathieu Morlighem [25723] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) CHG: use static allocation when possible for xyz_list Thu, 29 Oct 2020 21:22:24 GMT Mathieu Morlighem [25722] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: use static allocation when possible for xyz_list Thu, 29 Oct 2020 20:57:15 GMT Mathieu Morlighem [25721] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/cores/ProcessArguments.cpp (modified) BUG: cleaning up memory leaks Thu, 29 Oct 2020 20:33:29 GMT Mathieu Morlighem [25720] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) BUG: fixed memory leak Thu, 29 Oct 2020 18:23:57 GMT jdquinn [25719] * issm/trunk-jpl/test/NightlyRun/test437.py (modified) CHG: Correcting size retrieval Thu, 29 Oct 2020 15:52:41 GMT Mathieu Morlighem [25718] * issm/trunk-jpl/src/m/solve/loadresultfromdisk.py (modified) CHG: cosmetics Thu, 29 Oct 2020 15:52:14 GMT Mathieu Morlighem [25717] * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.m (modified) CHG: changed error message to warning so that bin/toolkits/etc are ... Thu, 29 Oct 2020 15:38:15 GMT Mathieu Morlighem [25716] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: grep is not always in /usr/bin! Tue, 27 Oct 2020 15:19:33 GMT Mathieu Morlighem [25715] * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_glads_nonlinear.cpp (modified) CHG: do not print if inner loop did not converge Sat, 24 Oct 2020 23:24:00 GMT seroussi [25714] * issm/trunk-jpl/src/m/solve/parseresultsfrombuffer.js (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified) NEW: added conversion for calving melting rate and calving components Fri, 23 Oct 2020 17:55:40 GMT jdquinn [25713] * issm/trunk-jpl/externalpackages/petsc/install-3.12-mac.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.14-mac.sh (modified) CHG: Removing make j option handler Fri, 23 Oct 2020 07:30:06 GMT jdquinn [25712] * issm/trunk-jpl/jenkins/pine_island-mac (modified) * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-matlab (deleted) * issm/trunk-jpl/jenkins/pine_island-mac-python (modified) * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-matlab (deleted) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.py (modified) CHG: Reverting to PETSc 3.12 on Pine Island until 3.14 is viable ... Thu, 22 Oct 2020 23:15:12 GMT jdquinn [25711] * issm/trunk-jpl/externalpackages/boost/configs/1.73/boost/math/tools/user.hpp (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.cpp (modified) CHG: Uncommitted change for Boost + Valgrind config; memory leak Thu, 22 Oct 2020 20:30:01 GMT jdquinn [25710] * issm/trunk-jpl/externalpackages/petsc/install-3.14-mac.sh (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/cores/controltao_core.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_schurcg.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/objects/PetscSolver.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/KSPFree.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/MatFree.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/MatMultPatch.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/NewMat.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/PetscOptionsDetermineSolverType.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/VecFree.cpp (modified) * issm/trunk-jpl/src/wrappers/IssmConfig/IssmConfig.h (modified) CHG: Now using PETSc defined macros for fencing Thu, 22 Oct 2020 19:31:59 GMT jdquinn [25709] * issm/trunk-jpl/test/NightlyRun/test243.py (modified) * issm/trunk-jpl/test/NightlyRun/test244.py (modified) * issm/trunk-jpl/test/NightlyRun/test252.py (modified) * issm/trunk-jpl/test/NightlyRun/test253.py (modified) BUG: Addressing of TransientSolution results structure; clean up Thu, 22 Oct 2020 18:13:23 GMT jdquinn [25708] * issm/trunk-jpl/test/NightlyRun/test243.py (modified) BUG: Addressing of TransientSolution results structure. Thu, 22 Oct 2020 17:38:26 GMT jdquinn [25707] * issm/trunk-jpl/externalpackages/petsc/install-3.6-win10.sh (added) BUG: Reverting removal of install script Thu, 22 Oct 2020 01:43:18 GMT jdquinn [25706] * issm/trunk-jpl/externalpackages/autotools/install-debian-linux.sh (modified) * issm/trunk-jpl/externalpackages/boost/configs/1.73 (added) * issm/trunk-jpl/externalpackages/boost/configs/1.73/boost (added) * issm/trunk-jpl/externalpackages/boost/configs/1.73/boost/math (added) * issm/trunk-jpl/externalpackages/boost/configs/1.73/boost/math/tools (added) * issm/trunk-jpl/externalpackages/boost/configs/1.73/boost/math/tools/user.hpp (added) * issm/trunk-jpl/externalpackages/boost/install-1.7-linux-valgrind.sh (added) * issm/trunk-jpl/externalpackages/valgrind/install-linux.sh (added) * issm/trunk-jpl/externalpackages/valgrind/install-linux64.sh (deleted) * issm/trunk-jpl/externalpackages/valgrind/install-mac.sh (added) * issm/trunk-jpl/externalpackages/valgrind/install-macosx64.sh (deleted) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-valgrind (added) CHG: Configuration for running Valgrind on builds with Boost Wed, 21 Oct 2020 19:09:49 GMT Mathieu Morlighem [25705] * issm/trunk-jpl/examples/shakti/moulin.par (modified) BUG: fixing SHAKTI Wed, 21 Oct 2020 17:24:22 GMT jdquinn [25704] * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Disabling 2006 again while debugging to keep Jenkins happy Wed, 21 Oct 2020 11:47:53 GMT hakesson [25703] * issm/trunk-jpl/src/m/miscellaneous/transientrestart.m (modified) CHG: added option to update mask from an old model version Wed, 21 Oct 2020 07:48:23 GMT jdquinn [25702] * issm/trunk-jpl/jenkins/jenkins.sh (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Test exclusion; comments Wed, 21 Oct 2020 07:02:43 GMT jdquinn [25701] * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) CHG: Missed GSL in config Wed, 21 Oct 2020 06:38:49 GMT jdquinn [25700] * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) * issm/trunk-jpl/test/NightlyRun/test408.m (modified) * issm/trunk-jpl/test/NightlyRun/test408.py (modified) BUG: SE and Dakota configurations are the same now because of test ... Wed, 21 Oct 2020 02:30:46 GMT jdquinn [25699] * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Enabling 2006 for Python Wed, 21 Oct 2020 02:29:01 GMT jdquinn [25698] * issm/trunk-jpl/src/m/classes/qmustatistics.py (modified) * issm/trunk-jpl/src/m/classes/results.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.py (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified) * issm/trunk-jpl/test/NightlyRun/test2006.m (modified) * issm/trunk-jpl/test/NightlyRun/test2006.py (modified) CHG: Reworked results structure for Python Tue, 20 Oct 2020 18:43:06 GMT Mathieu Morlighem [25697] * issm/trunk-jpl/src/c/analyses/HydrologyGlaDSAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Loads/Moulin.cpp (modified) CHG: making steadystate work Tue, 20 Oct 2020 16:55:08 GMT Mathieu Morlighem [25696] * issm/trunk-jpl/src/m/classes/hydrologyglads.m (modified) * issm/trunk-jpl/src/m/classes/hydrologyglads.py (modified) CHG: removed scaling of moulin input Tue, 20 Oct 2020 14:05:10 GMT Mathieu Morlighem [25695] * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) CHG: removing Justin's crap Tue, 20 Oct 2020 07:21:07 GMT jdquinn [25694] * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified) CHG: MATLAB -> Python Mon, 19 Oct 2020 22:40:49 GMT jdquinn [25693] * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) CHG: Exclude 2006 on Python, for now Mon, 19 Oct 2020 22:07:48 GMT jdquinn [25692] * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Exclude 2005 and 2006 on Python, for now Mon, 19 Oct 2020 21:13:03 GMT jdquinn [25691] * issm/trunk-jpl/src/c/classes/Inputs (modified) * issm/trunk-jpl/src/c/modules/FrontalForcingsx (modified) * issm/trunk-jpl/src/c/modules/KillIcebergsx (modified) * issm/trunk-jpl/src/c/modules/OceanExchangeDatax (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx (modified) CHG: svn:ignore fixes Mon, 19 Oct 2020 21:10:24 GMT jdquinn [25690] * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Need Dakota for tests 2005 and 2006 Mon, 19 Oct 2020 20:48:45 GMT jdquinn [25689] * issm/trunk-jpl/test/NightlyRun/runme.m (modified) * issm/trunk-jpl/test/NightlyRun/runme.py (modified) CHG: Accidental commit Mon, 19 Oct 2020 20:31:26 GMT jdquinn [25688] * issm/trunk-jpl/src (modified) * issm/trunk-jpl/src/c (modified) * issm/trunk-jpl/src/c/classes/Dakota (modified) * issm/trunk-jpl/src/c/classes/Inputs (modified) * issm/trunk-jpl/src/c/modules/FrontalForcingsx (modified) * issm/trunk-jpl/src/c/modules/KillIcebergsx (modified) * issm/trunk-jpl/src/c/modules/OceanExchangeDatax (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.cpp (modified) * issm/trunk-jpl/src/c/toolkits/codipack (modified) * issm/trunk-jpl/src/m/classes/SMBcomponents.py (modified) * issm/trunk-jpl/src/m/classes/SMBforcing.m (modified) * issm/trunk-jpl/src/m/classes/SMBforcing.py (modified) * issm/trunk-jpl/src/m/classes/SMBpddSicopolis.py (modified) * issm/trunk-jpl/src/m/classes/basalforcings.py (modified) * issm/trunk-jpl/src/m/classes/dsl.py (modified) * issm/trunk-jpl/src/m/classes/dslmme.py (modified) * issm/trunk-jpl/src/m/classes/flowequation.m (modified) * issm/trunk-jpl/src/m/classes/flowequation.py (modified) * issm/trunk-jpl/src/m/classes/friction.m (modified) * issm/trunk-jpl/src/m/classes/friction.py (modified) * issm/trunk-jpl/src/m/classes/frictioncoulomb.py (modified) * issm/trunk-jpl/src/m/classes/frictionjosh.py (modified) * issm/trunk-jpl/src/m/classes/frictionpism.py (modified) * issm/trunk-jpl/src/m/classes/frictionshakti.py (modified) * issm/trunk-jpl/src/m/classes/frictionwaterlayer.py (modified) * issm/trunk-jpl/src/m/classes/geometry.py (modified) * issm/trunk-jpl/src/m/classes/giaivins.m (modified) * issm/trunk-jpl/src/m/classes/giaivins.py (modified) * issm/trunk-jpl/src/m/classes/giamme.py (modified) * issm/trunk-jpl/src/m/classes/initialization.py (modified) * issm/trunk-jpl/src/m/classes/inversion.m (modified) * issm/trunk-jpl/src/m/classes/inversion.py (modified) * issm/trunk-jpl/src/m/classes/linearbasalforcings.py (modified) * issm/trunk-jpl/src/m/classes/lovenumbers.py (modified) * issm/trunk-jpl/src/m/classes/m1qn3inversion.py (modified) * issm/trunk-jpl/src/m/classes/masstransport.py (modified) * issm/trunk-jpl/src/m/classes/mismipbasalforcings.py (modified) * issm/trunk-jpl/src/m/classes/nodalvalue.m (modified) * issm/trunk-jpl/src/m/classes/nodalvalue.py (modified) * issm/trunk-jpl/src/m/classes/plumebasalforcings.py (modified) * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/classes/qmu/normal_uncertain.m (modified) * issm/trunk-jpl/src/m/classes/qmu/normal_uncertain.py (modified) * issm/trunk-jpl/src/m/classes/qmu/response_function.m (modified) * issm/trunk-jpl/src/m/classes/qmustatistics.m (modified) * issm/trunk-jpl/src/m/classes/qmustatistics.py (modified) * issm/trunk-jpl/src/m/classes/results.py (modified) * issm/trunk-jpl/src/m/classes/rotational.py (modified) * issm/trunk-jpl/src/m/classes/sealevelmodel.m (modified) * issm/trunk-jpl/src/m/classes/sealevelmodel.py (modified) * issm/trunk-jpl/src/m/classes/slr.m (modified) * issm/trunk-jpl/src/m/classes/slr.py (modified) * issm/trunk-jpl/src/m/classes/solidearth.py (modified) * issm/trunk-jpl/src/m/classes/solidearthsettings.py (modified) * issm/trunk-jpl/src/m/classes/spatiallinearbasalforcings.m (modified) * issm/trunk-jpl/src/m/classes/spatiallinearbasalforcings.py (added) * issm/trunk-jpl/src/m/classes/stressbalance.py (modified) * issm/trunk-jpl/src/m/classes/surfaceload.py (modified) * issm/trunk-jpl/src/m/classes/taoinversion.py (modified) * issm/trunk-jpl/src/m/classes/thermal.py (modified) * issm/trunk-jpl/src/m/classes/transient.py (modified) * issm/trunk-jpl/src/m/miscellaneous/pretty_print.m (modified) * issm/trunk-jpl/src/m/qmu/dakota_out_parse.m (modified) * issm/trunk-jpl/src/m/qmu/dakota_out_parse.py (modified) * issm/trunk-jpl/src/m/qmu/postqmu.py (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) * issm/trunk-jpl/src/m/qmu/qmupart2npart.m (modified) * issm/trunk-jpl/src/m/qmu/qmupart2npart.py (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.py (modified) * issm/trunk-jpl/src/m/solve/WriteData.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromcluster.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.py (modified) * issm/trunk-jpl/src/m/solve/marshall.m (modified) * issm/trunk-jpl/src/m/solve/marshall.py (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified) * issm/trunk-jpl/src/wrappers/CoordTransform (modified) * issm/trunk-jpl/test (modified) * issm/trunk-jpl/test/NightlyRun (modified) * issm/trunk-jpl/test/NightlyRun/runme.m (modified) * issm/trunk-jpl/test/NightlyRun/runme.py (modified) * issm/trunk-jpl/test/NightlyRun/test2002.py (modified) * issm/trunk-jpl/test/NightlyRun/test2005.m (modified) * issm/trunk-jpl/test/NightlyRun/test2005.py (added) * issm/trunk-jpl/test/NightlyRun/test2006.m (modified) * issm/trunk-jpl/test/NightlyRun/test2006.py (added) CHG: MATLAB -> Python translations in support of tests 2005 and 2006 ... Mon, 19 Oct 2020 20:28:03 GMT jdquinn [25687] * issm/trunk-jpl/jenkins/macosx_pine-island_examples (modified) * issm/trunk-jpl/jenkins/pine_island-mac (modified) * issm/trunk-jpl/jenkins/pine_island-mac-binaries (modified) * issm/trunk-jpl/jenkins/pine_island-mac-binaries-solid_earth (modified) * issm/trunk-jpl/jenkins/pine_island-mac-binaries-with_dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) CHG: Test suites; clean up Thu, 15 Oct 2020 15:44:41 GMT janel24 [25686] * issm/trunk-jpl/src/m/dev/issmversion.m (modified) * issm/trunk-jpl/src/m/dev/issmversion.py (modified) CHG: updated dates in issmversion Wed, 14 Oct 2020 07:19:52 GMT jdquinn [25685] * issm/trunk-jpl/jenkins/jenkins.sh (modified) * issm/trunk-jpl/src/m/classes/issmsettings.py (modified) * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/classes/qmustatistics.py (modified) * issm/trunk-jpl/src/m/exp/contourlevelzero.m (modified) * issm/trunk-jpl/src/m/geometry/polyarea.py (modified) * issm/trunk-jpl/src/m/mesh/meshintersect3d.m (modified) * issm/trunk-jpl/src/m/plot/plot_coastlines.m (modified) * issm/trunk-jpl/src/m/plot/plot_coastlines.py (added) * issm/trunk-jpl/src/m/plot/processdata.py (modified) * issm/trunk-jpl/src/m/qmu/postqmu.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromcluster.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.py (modified) CHG: MATLAB -> Python; calling external package install scripts with ... Tue, 13 Oct 2020 19:04:18 GMT jdquinn [25684] * issm/trunk-jpl/src/m/classes/clusters/generic.m (modified) * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) * issm/trunk-jpl/src/m/classes/clusters/generic_static.py (modified) * issm/trunk-jpl/src/m/classes/clusters/local.py (added) * issm/trunk-jpl/src/m/dev/devpath.py (modified) * issm/trunk-jpl/src/m/mesh/meshintersect3d.py (modified) CHG: MATLAB -> Python; clean up Tue, 13 Oct 2020 17:49:26 GMT Mathieu Morlighem [25683] * issm/trunk-jpl/src/c/classes/Loads/Moulin.cpp (modified) CHG: wrong sign for moulin storage Mon, 12 Oct 2020 21:15:14 GMT jdquinn [25682] * issm/trunk-jpl/src/m/classes/hydrologyglads.py (modified) CHG: MATLAB -> Python Mon, 12 Oct 2020 20:34:18 GMT Mathieu Morlighem [25681] * issm/trunk-jpl/src/m/classes/hydrologyglads.m (modified) CHG: moulin can be time series Mon, 12 Oct 2020 16:50:51 GMT Mathieu Morlighem [25680] * issm/trunk-jpl/src/c/analyses/ExtrapolationAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/LevelsetAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/cores/adjointbalancethickness2_core.cpp (modified) * issm/trunk-jpl/src/c/cores/adjointbalancethickness_core.cpp (modified) * issm/trunk-jpl/src/c/cores/balancethickness2_core.cpp (modified) * issm/trunk-jpl/src/c/cores/balancethickness_core.cpp (modified) * issm/trunk-jpl/src/c/cores/balancevelocity_core.cpp (modified) * issm/trunk-jpl/src/c/cores/bedslope_core.cpp (modified) * issm/trunk-jpl/src/c/cores/damage_core.cpp (modified) * issm/trunk-jpl/src/c/cores/depthaverage_core.cpp (modified) * issm/trunk-jpl/src/c/cores/esa_core.cpp (modified) * issm/trunk-jpl/src/c/cores/extrudefrombase_core.cpp (modified) * issm/trunk-jpl/src/c/cores/gia_core.cpp (modified) * issm/trunk-jpl/src/c/cores/groundingline_core.cpp (modified) * issm/trunk-jpl/src/c/cores/hydrology_core.cpp (modified) * issm/trunk-jpl/src/c/cores/masstransport_core.cpp (modified) * issm/trunk-jpl/src/c/cores/movingfront_core.cpp (modified) * issm/trunk-jpl/src/c/cores/sealevelchange_core.cpp (modified) * issm/trunk-jpl/src/c/cores/smb_core.cpp (modified) * issm/trunk-jpl/src/c/cores/steadystate_core.cpp (modified) * issm/trunk-jpl/src/c/cores/stressbalance_core.cpp (modified) * issm/trunk-jpl/src/c/cores/surfaceslope_core.cpp (modified) * issm/trunk-jpl/src/c/cores/thermal_core.cpp (modified) * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) CHG: better handling of prints Mon, 12 Oct 2020 15:20:25 GMT jdquinn [25679] * issm/trunk-jpl/src/m/classes/sealevelmodel.py (modified) CHG: MATLAB -> Python Mon, 12 Oct 2020 10:42:42 GMT bdef [25678] * issm/trunk-jpl/src/m/classes/SMBgradientscomponents.py (modified) BUG: fixing SMB gradcomponent Fri, 09 Oct 2020 23:25:10 GMT Eric.Larour [25677] * issm/trunk-jpl/src/m/classes/sealevelmodel.m (modified) CHG: diverse. Fri, 09 Oct 2020 22:53:49 GMT jdquinn [25676] * issm/trunk-jpl/jenkins/aws-amazon_linux-solid_earth (modified) * issm/trunk-jpl/jenkins/pine_island-mac-binaries-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Updating to PETSc 3.14 Fri, 09 Oct 2020 22:52:27 GMT Eric.Larour [25675] * issm/trunk-jpl/src/m/classes/sealevelmodel.m (modified) CHG: diverse Fri, 09 Oct 2020 22:50:22 GMT jdquinn [25674] * issm/trunk-jpl/jenkins/aws-amazon_linux-solid_earth (modified) * issm/trunk-jpl/jenkins/macosx_pine-island_examples (modified) * issm/trunk-jpl/jenkins/pine_island-mac (modified) * issm/trunk-jpl/jenkins/pine_island-mac-binaries (modified) * issm/trunk-jpl/jenkins/pine_island-mac-binaries-solid_earth (modified) * issm/trunk-jpl/jenkins/pine_island-mac-binaries-with_dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-matlab (modified) * issm/trunk-jpl/jenkins/pine_island-mac-python (modified) * issm/trunk-jpl/jenkins/pine_island-mac-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-adolc-ampioff (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-adolc-ampion (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries-with_dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-codipack (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-gia (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-iceocean (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-matlab (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-python (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-trunk (modified) CHG: Updating to PETSc 3.14 Fri, 09 Oct 2020 19:34:15 GMT jdquinn [25673] * issm/trunk-jpl/externalpackages/petsc/install-3.6-win10.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-aci.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-discover.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-greenplanet.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-hpc.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-linux-static.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-linux.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-linux64-static.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-linux64.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-mac-static.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-mac.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.7-pleiades.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.8-linux64.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.8-macosx64.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.9-aurora.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.9-linux64.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.9-macosx64.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.9-sherlock.sh (deleted) CHG: Clean up Fri, 09 Oct 2020 18:52:40 GMT Mathieu Morlighem [25672] * issm/trunk-jpl/externalpackages/petsc/install-3.14-linux.sh (added) * issm/trunk-jpl/externalpackages/petsc/install-3.14-mac.sh (added) CHG: added installation scripts for mac and linux Fri, 09 Oct 2020 18:44:46 GMT Mathieu Morlighem [25671] * issm/trunk-jpl/externalpackages/petsc/install-3.14-tetralith.sh (modified) CHG: minor Fri, 09 Oct 2020 18:16:52 GMT jdquinn [25670] * issm/trunk-jpl/jenkins/pine_island-mac (modified) * issm/trunk-jpl/jenkins/ross-debian_linux (modified) * issm/trunk-jpl/test/NightlyRun/runme.m (modified) * issm/trunk-jpl/test/NightlyRun/runme.py (modified) CHG: Reverting changes to test suites + Jenkins projects Fri, 09 Oct 2020 17:01:31 GMT jdquinn [25669] * issm/trunk-jpl/src/c/main/issm_post.cpp (modified) BUG: Need to avoid call to QmuStatistics functions if it is not compiled Fri, 09 Oct 2020 14:53:13 GMT Mathieu Morlighem [25668] * issm/trunk-jpl/src/m/classes/issmsettings.m (modified) CHG: minor Fri, 09 Oct 2020 09:01:58 GMT hakesson [25667] * issm/trunk-jpl/externalpackages/petsc/install-3.14-tetralith.sh (added) NEW: added install script for Swedish cluster Tetralith Fri, 09 Oct 2020 08:12:19 GMT jdquinn [25666] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/main/issm_dakota.cpp (modified) BUG: What should be final fix for fmemopen issue Fri, 09 Oct 2020 03:38:48 GMT jdquinn [25665] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: Bad define Fri, 09 Oct 2020 03:29:47 GMT jdquinn [25664] * issm/trunk-jpl/src/c/main/issm_dakota.cpp (modified) BUG: Bad parens Fri, 09 Oct 2020 03:18:25 GMT jdquinn [25663] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/main/issm_dakota.cpp (modified) BUG: Do not run Dakota statistics if fmemopen is not available Fri, 09 Oct 2020 00:54:25 GMT jdquinn [25662] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) BUG: Need to add fmemopen conditional again as build fails to compile ... Thu, 08 Oct 2020 21:26:29 GMT Mathieu Morlighem [25661] * issm/trunk-jpl/src/m/classes/flowequation.m (modified) CHG: added warning Thu, 08 Oct 2020 21:20:04 GMT jdquinn [25660] * issm/trunk-jpl/jenkins/pine_island-mac (modified) * issm/trunk-jpl/jenkins/ross-debian_linux (modified) CHG: Clean up Thu, 08 Oct 2020 19:31:51 GMT jdquinn [25659] * issm/trunk-jpl/externalpackages/petsc/install-3.12-linux-solid_earth.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.12-linux.sh (modified) * issm/trunk-jpl/jenkins/pine_island-mac-matlab (modified) * issm/trunk-jpl/jenkins/pine_island-mac-python (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-matlab (added) * issm/trunk-jpl/jenkins/ross-debian_linux-python (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Consolidating builds to MATLAB and Python APIs on Linux; clean up Thu, 08 Oct 2020 19:19:20 GMT jdquinn [25658] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/ext (deleted) * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.h (modified) CHG: Removed special handling for fmemopen Thu, 08 Oct 2020 18:52:57 GMT jdquinn [25657] * issm/trunk-jpl/test/NightlyRun/runme.py (modified) BUG: Removed print Thu, 08 Oct 2020 18:37:32 GMT jdquinn [25656] * issm/trunk-jpl/jenkins/pine_island-mac-dakota (modified) * issm/trunk-jpl/jenkins/pine_island-mac-python (modified) * issm/trunk-jpl/test/NightlyRun/runme.m (modified) * issm/trunk-jpl/test/NightlyRun/runme.py (modified) CHG: Modified test suites and benchmarks Thu, 08 Oct 2020 07:06:51 GMT jdquinn [25655] * issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) BUG: SLR rigid/elastic fix Thu, 08 Oct 2020 06:18:18 GMT jdquinn [25654] * issm/trunk-jpl/externalpackages/petsc/install-3.12-mac-solid_earth.sh (deleted) * issm/trunk-jpl/externalpackages/petsc/install-3.12-mac.sh (modified) CHG: Solid Earth configuration for PETSc is now the standard Wed, 07 Oct 2020 22:05:48 GMT jdquinn [25653] * issm/trunk-jpl/jenkins/pine_island-mac-matlab (copied) * issm/trunk-jpl/jenkins/pine_island-mac-python (copied) ADD: New configurations Wed, 07 Oct 2020 21:49:05 GMT Mathieu Morlighem [25652] * issm/trunk-jpl/src/c/classes/Params/Parameters.cpp (modified) CHG: fixing windows Wed, 07 Oct 2020 21:00:14 GMT jdquinn [25651] * issm/trunk-jpl/test/NightlyRun/test2010.py (modified) BUG: SealevelRSLEustatic -> Bslr Wed, 07 Oct 2020 15:11:22 GMT Mathieu Morlighem [25650] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: removed compiler flag specific to g++ Dakota Wed, 07 Oct 2020 07:44:24 GMT jdquinn [25649] * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/classes/qmustatistics.m (modified) * issm/trunk-jpl/src/m/classes/qmustatistics.py (added) CHG: Initial commit; clean up Wed, 07 Oct 2020 07:07:42 GMT jdquinn [25648] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: Need to define SYSTEM_HAS_FMEMOPEN unconditionally Wed, 07 Oct 2020 07:00:51 GMT jdquinn [25647] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) BUG: Bad commit Wed, 07 Oct 2020 03:43:23 GMT jdquinn [25646] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: Again trying to supplement macOS implementations of libc that do ... Wed, 07 Oct 2020 03:36:39 GMT jdquinn [25645] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.h (modified) BUG: Again trying to supplement macOS implementations of libc that do ... Wed, 07 Oct 2020 02:50:50 GMT jdquinn [25644] * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.h (modified) BUG: Again trying to supplement macOS implementations of libc that do ... Wed, 07 Oct 2020 02:48:03 GMT jdquinn [25643] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.h (modified) BUG: Again trying to supplement macOS implementations of libc that do ... Tue, 06 Oct 2020 22:51:04 GMT jdquinn [25642] * issm/trunk-jpl/src/c/classes/Params/Parameters.cpp (modified) BUG: Do not call PetscOptionsSetFromOptions(NULL) if Windows (for now) Tue, 06 Oct 2020 22:30:56 GMT jdquinn [25641] * issm/trunk-jpl/test/NightlyRun/test125.m (modified) BUG: typo Tue, 06 Oct 2020 22:02:00 GMT jdquinn [25640] * issm/trunk-jpl/test/NightlyRun/test125.js (modified) * issm/trunk-jpl/test/NightlyRun/test125.m (modified) * issm/trunk-jpl/test/NightlyRun/test125.py (modified) * issm/trunk-jpl/test/NightlyRun/test126.js (modified) * issm/trunk-jpl/test/NightlyRun/test126.m (modified) * issm/trunk-jpl/test/NightlyRun/test126.py (modified) BUG: recording -> checkpoint Tue, 06 Oct 2020 21:42:42 GMT jdquinn [25639] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.cpp (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx/QmuStatisticsx.h (modified) CHG: Attempt to fix lack of fmemopen on macOS < 10.13 Tue, 06 Oct 2020 21:42:29 GMT jdquinn [25638] * issm/trunk-jpl/src/c/ext (added) * issm/trunk-jpl/src/c/ext/fmemopen (added) * issm/trunk-jpl/src/c/ext/fmemopen/README.md (added) * issm/trunk-jpl/src/c/ext/fmemopen/fmemopen.c (added) * issm/trunk-jpl/src/c/ext/fmemopen/fmemopen.h (added) * issm/trunk-jpl/src/c/ext/fmemopen/open_memstream.c (added) * issm/trunk-jpl/src/c/ext/fmemopen/open_memstream.h (added) CHG: Attempt to fix lack of fmemopen on macOS < 10.13 Tue, 06 Oct 2020 19:31:26 GMT Mathieu Morlighem [25637] * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/issmsettings.js (modified) * issm/trunk-jpl/src/m/classes/issmsettings.m (modified) * issm/trunk-jpl/src/m/classes/issmsettings.py (modified) CHG: renaming recording_frequency checkpoint_frequency Tue, 06 Oct 2020 19:18:22 GMT Mathieu Morlighem [25636] * issm/trunk-jpl/src/m/consistency/checkfield.m (modified) * issm/trunk-jpl/src/m/exp/contourlevelzero.m (modified) CHG: cosmetics Tue, 06 Oct 2020 17:06:45 GMT Mathieu Morlighem [25635] * issm/trunk-jpl/externalpackages/petsc/install-3.14-greenplanet.sh (modified) CHG: compatibility with PETSc 3.14 Tue, 06 Oct 2020 17:06:22 GMT Mathieu Morlighem [25634] * issm/trunk-jpl/src/c/classes/Params/Parameters.cpp (modified) CHG: compatibility with PETSc 3.14 Tue, 06 Oct 2020 16:46:08 GMT jdquinn [25633] * issm/trunk-jpl/src/c/issm_post (deleted) DEL: Should never have been committed. Tue, 06 Oct 2020 16:44:24 GMT jdquinn [25632] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/classes/qmustatistics.m (modified) * issm/trunk-jpl/src/m/classes/sealevelmodel.py (modified) * issm/trunk-jpl/src/m/qmu/postqmu.py (modified) * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) BUG: Temp fix for Dakota test suite; needed to add issm_post to ... Tue, 06 Oct 2020 15:49:23 GMT Mathieu Morlighem [25631] * issm/trunk-jpl/src/m/contrib/larour/interpBedmap2.m (deleted) * issm/trunk-jpl/src/m/contrib/morlighem/modeldata/interpBedmap2.m (modified) CHG: fixed conflict with interpBedmap2 Tue, 06 Oct 2020 05:20:33 GMT dlcheng [25630] * issm/trunk-jpl/src/m/mesh/meshintersect2d.m (added) ADD: meshintersect2d.m Tue, 06 Oct 2020 01:53:04 GMT jdquinn [25629] * issm/trunk-jpl/src/m/qmu/postqmu.py (modified) BUG: MATLAB -> Python Mon, 05 Oct 2020 23:40:48 GMT jdquinn [25628] * issm/trunk-jpl/src/c/Makefile.am (modified) BUG: Do not compile issm_post without Dakota Mon, 05 Oct 2020 23:30:06 GMT jdquinn [25627] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/cores/ProcessArguments.cpp (modified) * issm/trunk-jpl/src/c/cores/cores.h (modified) * issm/trunk-jpl/src/c/cores/sealevelchange_core.cpp (modified) * issm/trunk-jpl/src/c/issm_post (added) * issm/trunk-jpl/src/c/main/issm_dakota.cpp (modified) * issm/trunk-jpl/src/c/main/issm_post.cpp (copied) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateElementsVerticesAndMaterials.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateNodes.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified) * issm/trunk-jpl/src/c/modules/NodeConnectivityx/NodeConnectivityx.cpp (modified) * issm/trunk-jpl/src/c/modules/OutputResultsx/OutputResultsx.cpp (modified) * issm/trunk-jpl/src/c/modules/QmuStatisticsx (copied) * issm/trunk-jpl/src/c/modules/modules.h (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/README (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Synchronize.sh (modified) * issm/trunk-jpl/src/m/classes/clusters/local.m (copied) * issm/trunk-jpl/src/m/classes/qmu.m (modified) * issm/trunk-jpl/src/m/classes/qmustatistics.m (copied) * issm/trunk-jpl/src/m/contrib/larour/confidenceintervals.m (copied) * issm/trunk-jpl/src/m/contrib/larour/glacier_inventory.m (modified) * issm/trunk-jpl/src/m/contrib/larour/interpBedmachine.m (copied) * issm/trunk-jpl/src/m/contrib/larour/interpBedmap2.m (copied) * issm/trunk-jpl/src/m/contrib/larour/mme_autotime_correlation_matrix.m (copied) * issm/trunk-jpl/src/m/contrib/larour/mme_time_correlation_matrix.m (deleted) * issm/trunk-jpl/src/m/contrib/larour/oceanmip.m (modified) * issm/trunk-jpl/src/m/plot/plot_coastlines.m (modified) * issm/trunk-jpl/src/m/plot/processdata.m (modified) * issm/trunk-jpl/src/m/plot/processdatalatlong.m (copied) * issm/trunk-jpl/src/m/plot/processmesh.m (modified) * issm/trunk-jpl/src/m/plot/subplotmodel.m (modified) * issm/trunk-jpl/src/m/qmu/postqmu.m (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromcluster.m (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) * issm/trunk-jpl/test/Archives/Archive2005.arch (copied) * issm/trunk-jpl/test/Archives/Archive2006.arch (copied) * issm/trunk-jpl/test/NightlyRun/test2004.m (modified) * issm/trunk-jpl/test/NightlyRun/test2005.m (copied) * issm/trunk-jpl/test/NightlyRun/test2006.m (copied) * issm/trunk-jpl/test/NightlyRun/test2010.m (modified) CHG: Merging changes from Eric’s branch (still need to get Eric to ... Sat, 03 Oct 2020 13:53:41 GMT Mathieu Morlighem [25626] * issm/trunk-jpl/src/m/classes/flowequation.js (modified) * issm/trunk-jpl/src/m/classes/flowequation.m (modified) * issm/trunk-jpl/src/m/classes/flowequation.py (modified) CHG: 2dflowband FS Fri, 02 Oct 2020 18:38:53 GMT Eric.Larour [25625] * issm/branches/trunk-larour-SLPS2020/src/m/qmu/postqmu.m (modified) CHG: post qmu phase. Thu, 01 Oct 2020 21:03:41 GMT Mathieu Morlighem [25624] * issm/trunk-jpl/externalpackages/petsc/install-3.14-greenplanet.sh (added) NEW: added install-3.14-greenplanet.sh