# # ChangeLog for / # # Generated by Trac 1.4.3 # 04/29/25 19:45:17 Fri, 12 Jun 2020 17:24:30 GMT jdquinn [25033] * issm/trunk-jpl/src/m/classes/qmu/uniform_uncertain.m (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) BUG: length -> size Fri, 12 Jun 2020 17:20:08 GMT jdquinn [25032] * issm/trunk-jpl/src/m/classes/qmu/uniform_uncertain.m (modified) BUG: length -> size Fri, 12 Jun 2020 16:53:07 GMT jdquinn [25031] * issm/trunk-jpl/src/m/qmu/expandresponses.py (modified) * issm/trunk-jpl/src/m/qmu/expandvariables.py (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.py (modified) CHG: Better variable naming so as not to confuse with indices; cleanup Fri, 12 Jun 2020 16:31:27 GMT Mathieu Morlighem [25030] * issm/trunk-jpl/src/c/classes/Inputs2/TransientInput2.cpp (modified) CHG: minor Fri, 12 Jun 2020 16:29:30 GMT Mathieu Morlighem [25029] * issm/trunk-jpl/test/NightlyRun/test355.py (modified) CHG: fixing floating point pb Fri, 12 Jun 2020 16:29:22 GMT jdquinn [25028] * issm/trunk-jpl/src/m/classes/qmu/normal_uncertain.m (modified) * issm/trunk-jpl/src/m/classes/qmu/uniform_uncertain.m (modified) * issm/trunk-jpl/src/m/classes/qmu/uniform_uncertain.py (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.py (modified) CHG: More fixes for QMU Fri, 12 Jun 2020 16:24:11 GMT Mathieu Morlighem [25027] * issm/trunk-jpl/src/c/classes/Inputs2/TransientInput2.cpp (modified) BUG: fixing AD Fri, 12 Jun 2020 16:14:02 GMT bdef [25026] * issm/trunk-jpl/src/m/classes/initialization.py (modified) BUG: fixing logic test Fri, 12 Jun 2020 16:11:02 GMT jdquinn [25025] * issm/trunk-jpl/src/m/classes/qmu/normal_uncertain.m (modified) * issm/trunk-jpl/src/m/classes/qmu/uniform_uncertain.m (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) CHG: Applied changes from normal_uncertain and handling to ... Fri, 12 Jun 2020 15:22:16 GMT bdef [25024] * issm/trunk-jpl/src/c/analyses/HydrologyDCEfficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCInefficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/Inputs2.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/Inputs2.h (modified) * issm/trunk-jpl/src/c/classes/Inputs2/TransientInput2.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/TransientInput2.h (modified) * issm/trunk-jpl/src/c/cores/hydrology_core.cpp (modified) * issm/trunk-jpl/src/c/modules/InputUpdateFromSolutionx/InputUpdateFromSolutionx.cpp (modified) * issm/trunk-jpl/src/m/classes/hydrologydc.m (modified) * issm/trunk-jpl/test/Archives/Archive905.arch (modified) * issm/trunk-jpl/test/NightlyRun/test905.m (modified) * issm/trunk-jpl/test/NightlyRun/test905.py (modified) CHG:moving averaging on inputs and modification on 905 test Fri, 12 Jun 2020 15:13:21 GMT bdef [25023] * issm/trunk-jpl/src/m/classes/frictionpism.py (added) * issm/trunk-jpl/src/m/classes/hydrologyglads.py (added) * issm/trunk-jpl/src/m/classes/hydrologypism.py (added) * issm/trunk-jpl/src/m/classes/initialization.py (modified) * issm/trunk-jpl/src/m/classes/model.py (modified) * issm/trunk-jpl/src/m/classes/stressbalance.py (modified) * issm/trunk-jpl/test/NightlyRun/test350.py (modified) * issm/trunk-jpl/test/NightlyRun/test355.py (added) * issm/trunk-jpl/test/NightlyRun/test610.py (added) * issm/trunk-jpl/test/NightlyRun/test612.py (added) NEW: adding hydro models in py and related tests, fix in ... Fri, 12 Jun 2020 03:34:52 GMT jdquinn [25022] * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/classes/qmu/normal_uncertain.m (modified) * issm/trunk-jpl/src/m/classes/qmu/normal_uncertain.py (modified) * issm/trunk-jpl/src/m/partition/AreaAverageOntoPartition.py (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.py (modified) * issm/trunk-jpl/test/NightlyRun/test412.py (modified) CHG: More MATLAB to Python API changes for Dakota interface Fri, 12 Jun 2020 02:43:05 GMT Eric.Larour [25021] * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) CHG: better check on size of partitions and time UQ. Fri, 12 Jun 2020 02:39:16 GMT Eric.Larour [25020] * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) CHG: updated checks for transient UQ. Fri, 12 Jun 2020 00:02:35 GMT Eric.Larour [25019] * issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/qmu.m (modified) * issm/trunk-jpl/src/m/classes/qmu/normal_uncertain.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) CHG: implemented new way of updating transient inputs using normal ... Thu, 11 Jun 2020 23:45:23 GMT schlegel [25018] * issm/trunk-jpl/src/m/classes/clusters/discover.m (modified) CHG: update calls for mpt in discover Thu, 11 Jun 2020 23:44:27 GMT schlegel [25017] * issm/trunk-jpl/externalpackages/petsc/install-3.7-discover.sh (modified) CHG: need mpt mpi Thu, 11 Jun 2020 22:21:33 GMT jdquinn [25016] * issm/trunk-jpl/test/NightlyRun/test218.js (modified) * issm/trunk-jpl/test/NightlyRun/test234.js (modified) * issm/trunk-jpl/test/NightlyRun/test235.js (modified) * issm/trunk-jpl/test/NightlyRun/test235.py (modified) * issm/trunk-jpl/test/NightlyRun/test250.py (modified) * issm/trunk-jpl/test/NightlyRun/test251.py (modified) * issm/trunk-jpl/test/NightlyRun/test413.py (modified) * issm/trunk-jpl/test/NightlyRun/test445.py (modified) CHG: Last of cleanup of md.qmu.numberofpartitions in NR Thu, 11 Jun 2020 21:59:11 GMT jdquinn [25015] * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/partition/partitioner.py (modified) * issm/trunk-jpl/src/m/qmu/importancefactors.py (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) * issm/trunk-jpl/test/NightlyRun/test244.py (modified) CHG: Dakota interface changes from MATLAB to Python Thu, 11 Jun 2020 20:29:27 GMT jdquinn [25014] * issm/trunk-jpl/src/m/classes/slr.py (modified) * issm/trunk-jpl/src/m/partition/partitioner.py (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupResponses.py (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.py (modified) CHG: Dakota interface changes from MATLAB to Python Thu, 11 Jun 2020 20:13:43 GMT jdquinn [25013] * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) BUG: Missing index Thu, 11 Jun 2020 19:11:08 GMT jdquinn [25012] * issm/trunk-jpl/src/m/classes/pairoptions.py (modified) * issm/trunk-jpl/src/m/classes/plotoptions.py (modified) * issm/trunk-jpl/src/m/miscellaneous/PythonFuncs.py (modified) CHG: Cleanup Thu, 11 Jun 2020 19:07:44 GMT jdquinn [25011] * issm/trunk-jpl/src/m/boundaryconditions/love_numbers.py (modified) * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/classes/qmu/response_function.py (modified) * issm/trunk-jpl/src/m/classes/slr.py (modified) * issm/trunk-jpl/src/m/coordsystems/gmtmask.py (modified) * issm/trunk-jpl/src/m/modules/Scotch.py (modified) * issm/trunk-jpl/src/m/partition/partitioner.py (modified) * issm/trunk-jpl/src/m/plot/export_gl.py (modified) * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) * issm/trunk-jpl/src/m/qmu/qmupart2npart.py (added) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupResponses.py (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.py (modified) CHG: Partial commit of changes to Python Dakota interface; cleanup Thu, 11 Jun 2020 17:32:01 GMT jdquinn [25010] * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/test/NightlyRun/test218.py (modified) * issm/trunk-jpl/test/NightlyRun/test234.py (modified) * issm/trunk-jpl/test/NightlyRun/test250.py (modified) * issm/trunk-jpl/test/NightlyRun/test251.py (modified) * issm/trunk-jpl/test/NightlyRun/test412.py (modified) * issm/trunk-jpl/test/NightlyRun/test413.py (modified) * issm/trunk-jpl/test/NightlyRun/test414.py (modified) * issm/trunk-jpl/test/NightlyRun/test417.py (modified) * issm/trunk-jpl/test/NightlyRun/test418.py (modified) * issm/trunk-jpl/test/NightlyRun/test420.m (modified) * issm/trunk-jpl/test/NightlyRun/test420.py (modified) * issm/trunk-jpl/test/NightlyRun/test440.py (modified) * issm/trunk-jpl/test/NightlyRun/test444.py (modified) * issm/trunk-jpl/test/NightlyRun/test445.py (modified) CHG: Updated Python tests; now moving back through changes to Dakota ... Thu, 11 Jun 2020 16:31:59 GMT Mathieu Morlighem [25009] * issm/trunk-jpl/test/NightlyRun/test250.m (modified) * issm/trunk-jpl/test/NightlyRun/test440.m (modified) BUG: trying to fix Dakota tests Thu, 11 Jun 2020 04:47:55 GMT Mathieu Morlighem [25008] * issm/trunk-jpl/test/NightlyRun/test101.m (modified) CHG: reverting test101.m Thu, 11 Jun 2020 04:45:24 GMT Eric.Larour [25007] * issm/trunk-jpl/test/NightlyRun/test218.m (modified) * issm/trunk-jpl/test/NightlyRun/test412.m (modified) * issm/trunk-jpl/test/NightlyRun/test413.m (modified) CHG: updating call to importance factors. Thu, 11 Jun 2020 04:42:24 GMT Eric.Larour [25006] * issm/trunk-jpl/src/m/classes/qmu.m (modified) CHG: removed vpartition and epartition from qmu class. Thu, 11 Jun 2020 04:41:58 GMT Eric.Larour [25005] * issm/trunk-jpl/test/NightlyRun/test101.m (modified) * issm/trunk-jpl/test/NightlyRun/test218.m (modified) * issm/trunk-jpl/test/NightlyRun/test234.m (modified) * issm/trunk-jpl/test/NightlyRun/test235.m (modified) * issm/trunk-jpl/test/NightlyRun/test244.m (modified) * issm/trunk-jpl/test/NightlyRun/test250.m (modified) * issm/trunk-jpl/test/NightlyRun/test251.m (modified) * issm/trunk-jpl/test/NightlyRun/test412.m (modified) * issm/trunk-jpl/test/NightlyRun/test413.m (modified) * issm/trunk-jpl/test/NightlyRun/test414.m (modified) * issm/trunk-jpl/test/NightlyRun/test417.m (modified) * issm/trunk-jpl/test/NightlyRun/test418.m (modified) * issm/trunk-jpl/test/NightlyRun/test420.m (modified) * issm/trunk-jpl/test/NightlyRun/test440.m (modified) * issm/trunk-jpl/test/NightlyRun/test444.m (modified) * issm/trunk-jpl/test/NightlyRun/test445.m (modified) CHG: updating tests to not rely on md.qmu.vpartition and ... Thu, 11 Jun 2020 04:25:19 GMT Eric.Larour [25004] * issm/trunk-jpl/src/m/partition/AreaAverageOntoPartition.m (modified) * issm/trunk-jpl/src/m/qmu/importancefactors.m (modified) CHG: switching to partition vectors instead of qmu.vpartition and ... Thu, 11 Jun 2020 04:19:25 GMT Eric.Larour [25003] * issm/trunk-jpl/src/m/coordsystems/epsg2proj.m (modified) CHG: fixed bug. Thu, 11 Jun 2020 04:19:08 GMT Eric.Larour [25002] * issm/trunk-jpl/src/m/contrib/larour/prjwrite.m (added) CHG: projection write for .shp file. Thu, 11 Jun 2020 04:18:51 GMT Eric.Larour [25001] * issm/trunk-jpl/src/m/contrib/larour/oceanmip.m (added) CHG: new ocean mip MME class. Thu, 11 Jun 2020 04:17:54 GMT Eric.Larour [25000] * issm/trunk-jpl/src/m/mesh/modelmerge3d.m (modified) CHG: maskpsl not need anymore. Thu, 11 Jun 2020 04:17:36 GMT Eric.Larour [24999] * issm/trunk-jpl/src/m/mesh/TwoDToThreeD.m (modified) CHG: maskpsl not needed anymore. Thu, 11 Jun 2020 04:13:04 GMT Eric.Larour [24998] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/modules/AverageOntoPartitionx/AverageOntoPartitionx.cpp (modified) * issm/trunk-jpl/src/c/modules/AverageOntoPartitionx/AverageOntoPartitionx.h (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/qmu.m (modified) * issm/trunk-jpl/src/m/classes/qmu/response_function.m (modified) * issm/trunk-jpl/src/m/partition/partitioner.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupResponses.m (modified) CHG: getting rid of qmu.vpartition and qmu.epartition completely. ... Thu, 11 Jun 2020 02:37:32 GMT jdquinn [24997] * issm/trunk-jpl/test/Archives/Archive2002.arch (modified) * issm/trunk-jpl/test/Archives/Archive2003.arch (modified) * issm/trunk-jpl/test/Archives/Archive2010.arch (modified) CHG: Updated archives. Thu, 11 Jun 2020 02:12:17 GMT Eric.Larour [24996] * issm/trunk-jpl/test/NightlyRun/test2004.m (modified) CHG: fixed some bugs. Wed, 10 Jun 2020 17:04:28 GMT Eric.Larour [24995] * issm/trunk-jpl/scripts/ol.m (modified) CHG: if you include an 'End' step, it will stop listing further ... Wed, 10 Jun 2020 09:16:15 GMT bdef [24994] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG:updating analysis list build for Hydro Tue, 09 Jun 2020 22:03:02 GMT schlegel [24993] * issm/trunk-jpl/externalpackages/dakota/configs/6.2/CMakeLists.txt.discover20.patch (added) * issm/trunk-jpl/externalpackages/dakota/install-6.2-intel20-discover.sh (added) * issm/trunk-jpl/externalpackages/petsc/install-3.7-discover.sh (added) CHG: update discover to new system requirements Tue, 09 Jun 2020 16:51:11 GMT jdquinn [24992] * issm/trunk-jpl/scripts/svn_repo_authors.sh (added) ADD: Script to output authors and number of commits from svn log Tue, 09 Jun 2020 16:50:01 GMT Mathieu Morlighem [24991] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/cores/levelsetfunctionslope_core.cpp (modified) CHG: better handling of list of analyses in transient by recursively ... Tue, 09 Jun 2020 10:06:44 GMT bdef [24990] * issm/trunk-jpl/src/m/classes/transient.py (modified) * issm/trunk-jpl/test/NightlyRun/test3300.py (modified) * issm/trunk-jpl/test/Par/SquareNoDyn.py (modified) CHG:removing setallnull which is a clone of deactivateall Tue, 09 Jun 2020 08:00:37 GMT Eric.Larour [24989] * issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/qmu.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/qmupart2npart.m (added) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) CHG: had to redesign the InputUpdateFromDakotax module to work with ... Tue, 09 Jun 2020 05:58:53 GMT Eric.Larour [24988] * issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified) * issm/trunk-jpl/src/m/classes/qmu.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/setupdesign/QmuSetupVariables.m (modified) CHG: more integration of partition vectors into variables. Slowly ... Tue, 09 Jun 2020 05:24:44 GMT Eric.Larour [24987] * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: new enum for qmu variable partitions. Tue, 09 Jun 2020 01:38:12 GMT Eric.Larour [24986] * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.cpp (modified) CHG: better hack. Tue, 09 Jun 2020 00:24:10 GMT Eric.Larour [24985] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/cores/sealevelchange_core.cpp (moved) CHG: moving sealevelrise_core to sealevelchange_core Tue, 09 Jun 2020 00:07:15 GMT Eric.Larour [24984] * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/cores/CorePointerFromSolutionEnum.cpp (modified) * issm/trunk-jpl/src/c/cores/cores.h (modified) * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) CHG: changing names around. Mon, 08 Jun 2020 23:48:30 GMT Eric.Larour [24983] * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) CHG: getting the BP part of RSL outside of the convergence loop. Mon, 08 Jun 2020 23:34:18 GMT Eric.Larour [24982] * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) CHG: bottom pressure modifications. Remove from geoid and add to RSL. Mon, 08 Jun 2020 17:37:24 GMT Eric.Larour [24981] * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.cpp (modified) * issm/trunk-jpl/src/c/cores/dakota_core.cpp (modified) CHG: outputing all fields during dakota iterations, if qmu.output is ... Mon, 08 Jun 2020 06:55:19 GMT Eric.Larour [24980] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: case of hydro material was not covered when doing a copy or a reset. Mon, 08 Jun 2020 06:54:43 GMT Eric.Larour [24979] * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.cpp (modified) CHG: reversing the hack for now. Mon, 08 Jun 2020 05:09:34 GMT Eric.Larour [24978] * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.cpp (modified) CHG: fixed small bug. Mon, 08 Jun 2020 04:57:08 GMT Eric.Larour [24977] * issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.cpp (modified) * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: making sure to optimize Dakota cores by hacking. Need to rethink ... Sat, 06 Jun 2020 20:26:11 GMT Eric.Larour [24976] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: reverse the order, because otherwise, we are generating uplift ... Sat, 06 Jun 2020 01:02:36 GMT schlegel [24975] * issm/trunk-jpl/externalpackages/boost/install-1.55-lonestar.sh (modified) CHG: new boost patches for lonestar Sat, 06 Jun 2020 00:38:06 GMT Eric.Larour [24974] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: reinstating the eustatic ice. Thanks! Sat, 06 Jun 2020 00:34:18 GMT Eric.Larour [24973] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: fixed issue with masks in geodetic + better computation of ... Fri, 05 Jun 2020 22:34:39 GMT Eric.Larour [24972] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: corrected wrong treatment of bottom pressure fingerprints. Fri, 05 Jun 2020 16:32:45 GMT jdquinn [24971] * issm/trunk-jpl/test/Archives/Archive2002.arch (modified) * issm/trunk-jpl/test/Archives/Archive2003.arch (modified) * issm/trunk-jpl/test/Archives/Archive2010.arch (modified) * issm/trunk-jpl/test/Archives/Archive2101.arch (modified) CHG: Updated archives. Fri, 05 Jun 2020 16:29:51 GMT jdquinn [24970] * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) * issm/trunk-jpl/packagers/linux/package-issm-linux-binaries-solid_earth.sh (modified) CHG: Excluding test 2004 for now. Fri, 05 Jun 2020 03:16:39 GMT Eric.Larour [24969] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: fixed small bug. Fri, 05 Jun 2020 02:56:33 GMT Eric.Larour [24968] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) CHG: bottom pressure fingerprints computations. Thu, 04 Jun 2020 16:41:56 GMT jdquinn [24967] * issm/trunk-jpl/externalpackages/dakota/install-6.2-mac-static.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-6.2-mac.sh (modified) CHG: Better way of finding libgfortran. Thu, 04 Jun 2020 16:05:13 GMT jdquinn [24966] * issm/trunk-jpl/externalpackages/dakota/install-6.2-mac-static.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-6.2-mac.sh (modified) CHG: Better way of finding libgfortran. Thu, 04 Jun 2020 08:23:25 GMT schlegel [24965] * issm/trunk-jpl/externalpackages/netcdf/install-4.3.sh (added) CHG: add back 4.3 for mojave install Thu, 04 Jun 2020 00:54:21 GMT Eric.Larour [24964] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: Casting of __RESTRICT__ pointers. Thu, 04 Jun 2020 00:23:04 GMT Eric.Larour [24963] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: enabling __restrict__ buffers if requested using a specific vendor. Thu, 04 Jun 2020 00:22:28 GMT Eric.Larour [24962] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: enabling _HAVE_RESTRICT_ define. Wed, 03 Jun 2020 22:22:20 GMT jdquinn [24961] * issm/trunk-jpl/externalpackages/dakota/install-6.2-mac-static.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-6.2-mac.sh (modified) CHG: Now searching for libgfortran rather than hardcoding. Wed, 03 Jun 2020 22:00:13 GMT Eric.Larour [24960] * issm/trunk-jpl/src/m/classes/slr.m (modified) CHG: replaced eartharea with planetradius. Wed, 03 Jun 2020 21:59:24 GMT Eric.Larour [24959] * issm/trunk-jpl/src/c/analyses/EsaAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: fixed large issues in computation of centroid. Also introduced ... Wed, 03 Jun 2020 21:35:07 GMT jdquinn [24958] * issm/trunk-jpl/externalpackages/adolc/install-withampi.sh (modified) BUG: Path to MPICH. Wed, 03 Jun 2020 19:26:37 GMT jdquinn [24957] * issm/trunk-jpl/src/m/coordsystems/epsg2proj.m (modified) BUG: Let system call parse string. Wed, 03 Jun 2020 19:24:10 GMT jdquinn [24956] * issm/trunk-jpl/src/m/coordsystems/epsg2proj.m (modified) BUG: Let system call parse string. Wed, 03 Jun 2020 17:45:03 GMT jdquinn [24955] * issm/trunk-jpl/externalpackages/adjoinablempi/install-linux.sh (modified) BUG: Tarball unpacks directly into src/. Wed, 03 Jun 2020 16:26:47 GMT jdquinn [24954] * issm/trunk-jpl/externalpackages/adjoinablempi/install-linux.sh (modified) BUG: Wasn’t moving source into src/. Wed, 03 Jun 2020 02:24:44 GMT jdquinn [24953] * issm/trunk-jpl/externalpackages/adjoinablempi/install-linux.sh (copied) * issm/trunk-jpl/jenkins/ross-debian_linux-adolc-ampion (modified) BUG: Correct path to MPICH Tue, 02 Jun 2020 02:45:48 GMT jdquinn [24952] * issm/trunk-jpl/externalpackages/gmt/install-6.0-linux-static.sh (modified) BUG: Linking issue (again) Tue, 02 Jun 2020 01:48:54 GMT Eric.Larour [24951] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: for later, using cblas. Tue, 02 Jun 2020 00:42:54 GMT Eric.Larour [24950] * issm/trunk-jpl/src/c/analyses/EsaAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/cores/esa_core.cpp (modified) * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) CHG: fixing some bugs introduced in the ESA core. Mon, 01 Jun 2020 22:12:02 GMT Eric.Larour [24949] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) CHG: tiny rearrangement. Mon, 01 Jun 2020 22:03:45 GMT jdquinn [24948] * issm/trunk-jpl/externalpackages/gmt/install-6.0-linux-static.sh (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries-solid_earth (modified) BUG: Linking issue. Mon, 01 Jun 2020 21:48:19 GMT Eric.Larour [24947] * issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: cleanup the sea level rise core prototypes. Mon, 01 Jun 2020 21:22:09 GMT Eric.Larour [24946] * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) CHG: further optimization in the geodetic module, using the geometry ... Mon, 01 Jun 2020 18:03:22 GMT jdquinn [24945] * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/m/mesh/planet/gmsh/gmshplanet.m (modified) CHG: Needed to supply path to Gmsh root in build config; cleanup Mon, 01 Jun 2020 17:27:05 GMT Eric.Larour [24944] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: reorg and cleanup of the sea level cores, pushing as much as ... Mon, 01 Jun 2020 17:24:28 GMT tsantos [24943] * issm/trunk-jpl/src/m/mech/basalstress.m (modified) BUG: fixed the basal stress computation Mon, 01 Jun 2020 17:01:04 GMT jdquinn [24942] * issm/trunk-jpl/jenkins/ross-debian_linux-binaries-solid_earth (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/packagers/linux/package-issm-linux-binaries-solid_earth.sh (modified) * issm/trunk-jpl/src/m/mesh/planet/gmsh/gmshplanet.m (modified) * issm/trunk-jpl/src/m/mesh/planet/gmsh/gmshplanet.py (modified) * issm/trunk-jpl/src/wrappers/IssmConfig/IssmConfig.cpp (modified) CHG: Moved Gmsh version setting to issm_options.m4 and IssmConfig.cpp ... Mon, 01 Jun 2020 05:04:40 GMT Eric.Larour [24941] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: further optimizations based on availability of areas and masks. Mon, 01 Jun 2020 04:40:46 GMT Eric.Larour [24940] * issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/cores/cores.h (modified) * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/slr.m (modified) CHG: replacing earth area computations with a constant coming from ... Mon, 01 Jun 2020 04:34:58 GMT Mathieu Morlighem [24939] * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.h (modified) * issm/trunk-jpl/src/c/classes/Inputs2/DoubleInput2.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/IntInput2.cpp (modified) CHG: some cleanup Sun, 31 May 2020 07:21:13 GMT Eric.Larour [24938] * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/classes/SealevelMasks.h (added) * issm/trunk-jpl/src/c/classes/classes.h (modified) * issm/trunk-jpl/src/c/cores/cores.h (modified) * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) CHG: optimizing sea level masks. Create new SealevelMasks classs and ... Sun, 31 May 2020 05:27:48 GMT Mathieu Morlighem [24937] * issm/trunk-jpl/externalpackages/petsc/install-3.6-win10.sh (added) CHG: adding install-3.6-win10.sh back for NR Sun, 31 May 2020 05:25:06 GMT Mathieu Morlighem [24936] * issm/trunk-jpl/src/c/analyses/BalancethicknessAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceVerticalAnalysis.cpp (modified) CHG: removing TripleMultiply... inefficient Sun, 31 May 2020 05:18:26 GMT Eric.Larour [24935] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/DoubleInput2.cpp (added) * issm/trunk-jpl/src/c/classes/Inputs2/DoubleInput2.h (added) * issm/trunk-jpl/src/c/classes/Inputs2/Inputs2.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/Inputs2.h (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: added DoubleInput2 class. Added Area computation in the ... Sun, 31 May 2020 05:16:25 GMT Eric.Larour [24934] * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) CHG: only compute geometrical quantities once when running a transient.