# # ChangeLog for / # # Generated by Trac 1.4.3 # 04/30/25 16:35:37 Fri, 28 Feb 2020 00:19:24 GMT jdquinn [24611] * issm/trunk-jpl/etc/environment.sh (modified) * issm/trunk-jpl/externalpackages/triangle/install-windows-static.sh (copied) * issm/trunk-jpl/externalpackages/triangle/makefile (modified) * issm/trunk-jpl/jenkins/windows (modified) CHG: Updated config for Triangle for Windows build Thu, 27 Feb 2020 20:36:56 GMT jdquinn [24610] * issm/trunk-jpl/externalpackages/adjoinablempi/install.sh (modified) * issm/trunk-jpl/externalpackages/adolc/install-withampi.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.7-linux.sh (modified) CHG: Fixes for ADOL-C build; cleanup Thu, 27 Feb 2020 20:10:53 GMT jdquinn [24609] * issm/trunk-jpl/externalpackages/triangle/install-mac.sh (added) CHG: Correcting permissions Thu, 27 Feb 2020 20:10:01 GMT jdquinn [24608] * issm/trunk-jpl/externalpackages/triangle/install-mac.sh (deleted) CHG: Correcting permissions Thu, 27 Feb 2020 19:58:32 GMT jdquinn [24607] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Correcting ParMETIS linking Thu, 27 Feb 2020 19:02:38 GMT jdquinn [24606] * issm/trunk-jpl/externalpackages/triangle/configs/linux/configure.make (modified) * issm/trunk-jpl/externalpackages/triangle/configs/mac/configure.make (modified) * issm/trunk-jpl/externalpackages/triangle/configs/makefile (modified) * issm/trunk-jpl/externalpackages/triangle/configs/windows/configure.make (modified) CHG: More Triangle config changes to support Windows build Thu, 27 Feb 2020 17:54:29 GMT jdquinn [24605] * issm/trunk-jpl/externalpackages/triangle/configs/win32 (deleted) * issm/trunk-jpl/externalpackages/triangle/configs/win7 (deleted) * issm/trunk-jpl/externalpackages/triangle/configs/windows (added) * issm/trunk-jpl/externalpackages/triangle/configs/windows/configure.make (added) * issm/trunk-jpl/externalpackages/triangle/install-windows.sh (added) * issm/trunk-jpl/jenkins/windows (modified) CHG: Triangle config and install script for Windows build Thu, 27 Feb 2020 17:44:00 GMT jdquinn [24604] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) CHG: Missed commit with correct Triangle install script Thu, 27 Feb 2020 17:40:39 GMT jdquinn [24603] * issm/trunk-jpl/src/m/classes/clusters/generic_static.py (modified) CHG: Updated to reflect changes to generic.py Thu, 27 Feb 2020 11:39:41 GMT bdef [24602] * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) BUG: fixing some imports Thu, 27 Feb 2020 08:19:59 GMT bdef [24601] * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) CHG:minor clean up Thu, 27 Feb 2020 08:06:56 GMT bdef [24600] * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) CHG:change in the handling of settings Thu, 27 Feb 2020 07:45:08 GMT jdquinn [24599] * issm/trunk-jpl/jenkins/ross-debian_linux-javascript (modified) CHG: Updated install script for Triangle Thu, 27 Feb 2020 07:41:06 GMT jdquinn [24598] * issm/trunk-jpl/externalpackages/triangle/install-linux.sh (added) CHG: Correcting permissions Thu, 27 Feb 2020 07:40:12 GMT jdquinn [24597] * issm/trunk-jpl/externalpackages/triangle/install-linux.sh (deleted) CHG: Correcting permission Thu, 27 Feb 2020 07:13:22 GMT jdquinn [24596] * issm/trunk-jpl/externalpackages/autotools/install-debian-linux.sh (added) * issm/trunk-jpl/externalpackages/autotools/install-debian.sh (deleted) CHG: Corrected permissions Thu, 27 Feb 2020 07:12:24 GMT jdquinn [24595] * issm/trunk-jpl/externalpackages/autotools/install-debian-linux.sh (deleted) DEL: Need to remove to add correct permissions Thu, 27 Feb 2020 06:54:16 GMT jdquinn [24594] * issm/trunk-jpl/externalpackages/triangle/configs/mac/configure.make (modified) * issm/trunk-jpl/jenkins/macosx_pine-island (modified) * issm/trunk-jpl/jenkins/macosx_pine-island_dakota (modified) * issm/trunk-jpl/jenkins/macosx_pine-island_dakota_static (modified) * issm/trunk-jpl/jenkins/macosx_pine-island_examples (modified) * issm/trunk-jpl/jenkins/macosx_pine-island_static (modified) CHG: Updated Triangle configuration for Mac builds Thu, 27 Feb 2020 06:46:55 GMT jdquinn [24593] * issm/trunk-jpl/externalpackages/autotools/install-debian-linux.sh (added) * issm/trunk-jpl/externalpackages/boost/configs/1.55/linux (added) * issm/trunk-jpl/externalpackages/boost/configs/1.55/linux/boost (added) * issm/trunk-jpl/externalpackages/boost/configs/1.55/linux/boost/multi_index (added) * issm/trunk-jpl/externalpackages/boost/configs/1.55/linux/boost/multi_index/ordered_index.hpp (added) * issm/trunk-jpl/externalpackages/boost/install-1.55-linux-static.sh (added) * issm/trunk-jpl/externalpackages/boost/install-1.55-linux.sh (modified) * issm/trunk-jpl/externalpackages/boost/install-1.72-linux-static.sh (added) * issm/trunk-jpl/externalpackages/boost/install-1.72-linux.sh (added) * issm/trunk-jpl/externalpackages/cmake/install.sh (modified) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/cmake (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/cmake/BuildDakotaCustom.cmake (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/cmake/DakotaDev.cmake (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/DDACE (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/DDACE/src (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/DDACE/src/Analyzer (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/DDACE/src/Analyzer/MainEffectsExcelOutput.cpp (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/pecos (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/pecos/src (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/pecos/src/pecos_global_defs.hpp (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/surfpack (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/surfpack/src (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/surfpack/src/surfaces (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/surfpack/src/surfaces/nkm (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/packages/surfpack/src/surfaces/nkm/NKM_KrigingModel.cpp (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/src (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/src/DakotaInterface.cpp (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/src/NonDLocalReliability.cpp (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/linux/src/NonDSampling.cpp (added) * issm/trunk-jpl/externalpackages/dakota/install-6.2-linux-static.sh (added) * issm/trunk-jpl/externalpackages/dakota/install-6.2-linux.sh (added) * issm/trunk-jpl/externalpackages/lapack/install-3.8-linux-static.sh (added) * issm/trunk-jpl/externalpackages/lapack/install-3.8-linux.sh (modified) * issm/trunk-jpl/externalpackages/mpich/install-3.2-static.sh (added) * issm/trunk-jpl/externalpackages/mpich/install-3.3-static.sh (added) * issm/trunk-jpl/externalpackages/mpich/install-3.3.sh (modified) * issm/trunk-jpl/externalpackages/mumps/configs/5.0 (added) * issm/trunk-jpl/externalpackages/mumps/configs/5.0/linux (added) * issm/trunk-jpl/externalpackages/mumps/configs/5.0/linux/Makefile.debian.static.PAR (added) * issm/trunk-jpl/externalpackages/mumps/install-5.0-linux-parallel-static.sh (added) * issm/trunk-jpl/externalpackages/openblas (added) * issm/trunk-jpl/externalpackages/openblas/install-0.3-linux-static.sh (added) * issm/trunk-jpl/externalpackages/petsc/install-3.7-linux-static.sh (added) * issm/trunk-jpl/externalpackages/scalapack (added) * issm/trunk-jpl/externalpackages/scalapack/configs (added) * issm/trunk-jpl/externalpackages/scalapack/configs/2.0 (added) * issm/trunk-jpl/externalpackages/scalapack/configs/2.0/linux (added) * issm/trunk-jpl/externalpackages/scalapack/configs/2.0/linux/SLmake.inc.static (added) * issm/trunk-jpl/externalpackages/scalapack/install-2.0-linux-static.sh (added) * issm/trunk-jpl/externalpackages/scotch/configs (added) * issm/trunk-jpl/externalpackages/scotch/configs/6.0 (added) * issm/trunk-jpl/externalpackages/scotch/configs/6.0/linux (added) * issm/trunk-jpl/externalpackages/scotch/configs/6.0/linux/Makefile.inc.linux-parallel-static (added) * issm/trunk-jpl/externalpackages/scotch/install-6.0-linux-parallel-static.sh (added) * issm/trunk-jpl/externalpackages/triangle/configs/javascript/triangle.h (added) * issm/trunk-jpl/externalpackages/triangle/configs/makefile (added) * issm/trunk-jpl/externalpackages/triangle/configs/triangle.h (added) * issm/trunk-jpl/externalpackages/triangle/install-linux-javascript.sh (added) * issm/trunk-jpl/jenkins/ross-debian_linux (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-adolc-ampioff (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-adolc-ampion (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries (added) * issm/trunk-jpl/jenkins/ross-debian_linux-binaries-with_dakota (added) * issm/trunk-jpl/jenkins/ross-debian_linux-codipack (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-gia (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-iceocean (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-javascript (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-python (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/packagers/linux (added) * issm/trunk-jpl/packagers/linux/package-issm-linux-binaries-with_dakota.sh (added) * issm/trunk-jpl/packagers/linux/package-issm-linux-binaries.sh (added) * issm/trunk-jpl/scripts/devpath.py (added) * issm/trunk-jpl/scripts/test-issm-linux-binaries-with_dakota.sh (added) * issm/trunk-jpl/scripts/test-issm-linux-binaries.sh (added) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/cores/dakota_core.cpp (modified) * issm/trunk-jpl/src/c/modules/Scotchx/Scotchx.h (modified) * issm/trunk-jpl/src/c/shared/Numerics/constants.h (modified) * issm/trunk-jpl/src/c/toolkits/mpi/issmmpi.h (modified) * issm/trunk-jpl/src/m/Makefile.am (modified) * issm/trunk-jpl/src/m/classes/clusters/generic.m (modified) * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) * issm/trunk-jpl/src/m/classes/clusters/generic_static.m (modified) * issm/trunk-jpl/src/m/classes/clusters/generic_static.py (added) * issm/trunk-jpl/src/m/classes/model.py (modified) * issm/trunk-jpl/src/m/classes/qmu.m (modified) * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/miscellaneous/normfit_issm.py (modified) * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) * issm/trunk-jpl/src/wrappers/python/Makefile.am (modified) CHG: Added new configurations for Linux binaries, including support ... Wed, 26 Feb 2020 23:41:41 GMT Mathieu Morlighem [24592] * issm/trunk-jpl/test/NightlyRun/yellowstone.lsf (deleted) * issm/trunk-jpl/test/NightlyRun/yellowstone.m (deleted) CHG: not needed Wed, 26 Feb 2020 17:36:16 GMT Mathieu Morlighem [24591] * issm/trunk-jpl/src/m/classes/SMBpddSicopolis.py (modified) CHG: minor Wed, 26 Feb 2020 17:34:53 GMT Mathieu Morlighem [24590] * issm/trunk-jpl/test/NightlyRun/test236.py (modified) CHG: fixing test236.py Wed, 26 Feb 2020 16:08:59 GMT Mathieu Morlighem [24589] * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) * issm/trunk-jpl/src/m/classes/clusters/pfe.py (modified) CHG: use generic_settings if exists Wed, 26 Feb 2020 16:01:36 GMT Mathieu Morlighem [24588] * issm/trunk-jpl/src/m/classes/SMBd18opdd.py (modified) * issm/trunk-jpl/test/NightlyRun/test236.py (modified) * issm/trunk-jpl/test/NightlyRun/test237.py (modified) * issm/trunk-jpl/test/NightlyRun/test238.py (modified) CHG: fixing python tests Wed, 26 Feb 2020 11:19:19 GMT bdef [24587] * issm/trunk-jpl/test/Archives/Archive330.arch (deleted) * issm/trunk-jpl/test/Archives/Archive332.arch (deleted) * issm/trunk-jpl/test/Archives/Archive333.arch (deleted) * issm/trunk-jpl/test/Archives/Archive334.arch (deleted) * issm/trunk-jpl/test/Archives/Archive335.arch (deleted) * issm/trunk-jpl/test/NightlyRun/test330.m (deleted) * issm/trunk-jpl/test/NightlyRun/test330.py (deleted) * issm/trunk-jpl/test/NightlyRun/test332.m (deleted) * issm/trunk-jpl/test/NightlyRun/test332.py (deleted) * issm/trunk-jpl/test/NightlyRun/test333.m (deleted) * issm/trunk-jpl/test/NightlyRun/test333.py (deleted) * issm/trunk-jpl/test/NightlyRun/test334.m (deleted) * issm/trunk-jpl/test/NightlyRun/test334.py (deleted) * issm/trunk-jpl/test/NightlyRun/test335.m (deleted) * issm/trunk-jpl/test/NightlyRun/test335.py (deleted) CHG: removing hydro NR that are now in 900s Wed, 26 Feb 2020 04:40:50 GMT seroussi [24586] * issm/trunk-jpl/src/m/classes/SMBpdd.m (modified) * issm/trunk-jpl/src/m/classes/SMBpdd.py (modified) * issm/trunk-jpl/src/m/classes/frictiontemp.m (modified) CHG: mot a time series anymore Wed, 26 Feb 2020 04:38:20 GMT seroussi [24585] * issm/trunk-jpl/test/NightlyRun/test237.py (modified) * issm/trunk-jpl/test/NightlyRun/test238.py (modified) BUG: no more time Wed, 26 Feb 2020 00:35:52 GMT Mathieu Morlighem [24584] * issm/trunk-jpl/test/NightlyRun/Makefile (modified) * issm/trunk-jpl/test/NightlyRun/test236.m (modified) * issm/trunk-jpl/test/NightlyRun/test236.py (modified) * issm/trunk-jpl/test/NightlyRun/test237.m (modified) * issm/trunk-jpl/test/NightlyRun/test237.py (modified) * issm/trunk-jpl/test/NightlyRun/test238.m (modified) * issm/trunk-jpl/test/NightlyRun/test238.py (modified) * issm/trunk-jpl/test/NightlyRun/test239.m (modified) * issm/trunk-jpl/test/NightlyRun/test239.py (modified) * issm/trunk-jpl/test/NightlyRun/test240.m (modified) * issm/trunk-jpl/test/NightlyRun/test240.py (modified) * issm/trunk-jpl/test/NightlyRun/test247.m (modified) CHG: now assume that we have monthly temps and precips Wed, 26 Feb 2020 00:34:56 GMT Mathieu Morlighem [24583] * issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/m/classes/SMBd18opdd.m (modified) * issm/trunk-jpl/src/m/classes/SMBd18opdd.py (modified) * issm/trunk-jpl/src/m/classes/SMBpdd.m (modified) * issm/trunk-jpl/src/m/classes/SMBpdd.py (modified) CHG: now assume that we have monthly temps and precips Wed, 26 Feb 2020 00:26:33 GMT Mathieu Morlighem [24582] * issm/trunk-jpl/test/NightlyRun/test245.py (modified) BUG: no more time Tue, 25 Feb 2020 22:12:24 GMT Mathieu Morlighem [24581] * issm/trunk-jpl/src/m/classes/SMBpddSicopolis.py (modified) CHG: minor Tue, 25 Feb 2020 22:09:06 GMT Mathieu Morlighem [24580] * issm/trunk-jpl/src/m/classes/SMBpddSicopolis.m (modified) CHG: minor Tue, 25 Feb 2020 22:07:05 GMT Mathieu Morlighem [24579] * issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/DatasetInput2.cpp (modified) * issm/trunk-jpl/src/c/classes/IoModel.cpp (modified) * issm/trunk-jpl/src/c/classes/IoModel.h (modified) * issm/trunk-jpl/test/NightlyRun/test245.m (modified) * issm/trunk-jpl/test/NightlyRun/test245.py (modified) CHG: making PDD inputs a dataset instead, as we know its size is 12 Tue, 25 Feb 2020 18:48:50 GMT Mathieu Morlighem [24578] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: fixing DatasetInputCreate Mon, 24 Feb 2020 21:42:58 GMT schlegel [24577] * issm/trunk-jpl/src/m/classes/frictiontemp.m (modified) CHG: make temperature check universal type Thu, 20 Feb 2020 17:14:51 GMT Mathieu Morlighem [24576] * issm/trunk-jpl/src/m/classes/model.py (modified) CHG: minor, make sure ordering between MATLAB and python is ... Thu, 20 Feb 2020 17:04:41 GMT Mathieu Morlighem [24575] * issm/trunk-jpl/test/NightlyRun/test905.m (modified) * issm/trunk-jpl/test/NightlyRun/test905.py (modified) CHG: minor problem with double vs int Thu, 20 Feb 2020 16:55:48 GMT Mathieu Morlighem [24574] * issm/trunk-jpl/test/NightlyRun/test330.m (modified) * issm/trunk-jpl/test/NightlyRun/test330.py (modified) CHG: Strip is a rectangle, Square is not, reverting Thu, 20 Feb 2020 16:35:14 GMT Mathieu Morlighem [24573] * issm/trunk-jpl/src/c/modules/Solverx/Solverx.cpp (modified) CHG: minor Thu, 20 Feb 2020 16:30:27 GMT Mathieu Morlighem [24572] * issm/trunk-jpl/test/Archives/Archive330.arch (modified) CHG: reverting archive Thu, 20 Feb 2020 14:39:40 GMT bdef [24571] * issm/trunk-jpl/test/NightlyRun/test330.m (modified) * issm/trunk-jpl/test/NightlyRun/test330.py (modified) CHG: geometry change for test 330 Thu, 20 Feb 2020 14:34:31 GMT bdef [24570] * issm/trunk-jpl/test/NightlyRun/test901.m (modified) * issm/trunk-jpl/test/NightlyRun/test902.m (modified) * issm/trunk-jpl/test/NightlyRun/test903.m (modified) * issm/trunk-jpl/test/NightlyRun/test904.m (modified) * issm/trunk-jpl/test/NightlyRun/test905.m (modified) BUG:NR fix Thu, 20 Feb 2020 14:05:48 GMT bdef [24569] * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) * issm/trunk-jpl/src/m/plot/plot_unit.py (modified) * issm/trunk-jpl/test/Archives/Archive330.arch (modified) * issm/trunk-jpl/test/Archives/Archive900.arch (added) * issm/trunk-jpl/test/Archives/Archive901.arch (added) * issm/trunk-jpl/test/Archives/Archive902.arch (added) * issm/trunk-jpl/test/Archives/Archive903.arch (added) * issm/trunk-jpl/test/Archives/Archive904.arch (added) * issm/trunk-jpl/test/Archives/Archive905.arch (added) * issm/trunk-jpl/test/NightlyRun/GetIds.py (modified) * issm/trunk-jpl/test/NightlyRun/test900.m (added) * issm/trunk-jpl/test/NightlyRun/test900.py (added) * issm/trunk-jpl/test/NightlyRun/test901.m (added) * issm/trunk-jpl/test/NightlyRun/test901.py (added) * issm/trunk-jpl/test/NightlyRun/test902.m (added) * issm/trunk-jpl/test/NightlyRun/test902.py (added) * issm/trunk-jpl/test/NightlyRun/test903.m (added) * issm/trunk-jpl/test/NightlyRun/test903.py (added) * issm/trunk-jpl/test/NightlyRun/test904.m (added) * issm/trunk-jpl/test/NightlyRun/test904.py (added) * issm/trunk-jpl/test/NightlyRun/test905.m (added) * issm/trunk-jpl/test/NightlyRun/test905.py (added) * issm/trunk-jpl/test/Par/SquareNoDyn.par (added) * issm/trunk-jpl/test/Par/SquareNoDyn.py (added) NEW: migrating Hydro tests to 900 (SquareNoDyn geometry) and minor ... Wed, 19 Feb 2020 21:18:04 GMT Mathieu Morlighem [24568] * issm/trunk-jpl/test/Archives/Archive247.arch (added) * issm/trunk-jpl/test/NightlyRun/test247.m (added) CHG: added paleo NR for Josh Wed, 19 Feb 2020 10:35:13 GMT bdef [24567] * issm/trunk-jpl/src/m/classes/thermal.py (modified) * issm/trunk-jpl/src/m/mesh/roundmesh.py (modified) BUG:minor changes to suit my new numpy Fri, 14 Feb 2020 16:34:57 GMT Mathieu Morlighem [24566] * issm/trunk-jpl/src/c/classes/Inputs2/TransientInput2.cpp (modified) BUG: fixing adjoint Fri, 14 Feb 2020 13:45:36 GMT bdef [24565] * issm/trunk-jpl/src/c/analyses/HydrologyDCInefficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/classes/Inputs2/Inputs2.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/Inputs2.h (modified) * issm/trunk-jpl/src/c/classes/Inputs2/TransientInput2.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/TransientInput2.h (modified) * issm/trunk-jpl/src/c/cores/hydrology_core.cpp (modified) * issm/trunk-jpl/src/c/cores/smb_core.cpp (modified) * issm/trunk-jpl/src/m/contrib/defleurian/paraview/exportVTK.py (modified) * issm/trunk-jpl/src/m/plot/applyoptions.py (modified) * issm/trunk-jpl/src/m/plot/plot_contour.py (modified) * issm/trunk-jpl/src/m/plot/plot_unit.py (modified) * issm/trunk-jpl/test/NightlyRun/runme.py (modified) BUG:fix for the coupling on different time steps Sun, 09 Feb 2020 05:40:15 GMT Mathieu Morlighem [24564] * issm/trunk-jpl/test/NightlyRun/test318.py (modified) CHG: now 5 layers like matlab Sun, 09 Feb 2020 05:05:08 GMT Mathieu Morlighem [24563] * issm/trunk-jpl/test/Archives/Archive318.arch (modified) * issm/trunk-jpl/test/NightlyRun/test318.m (modified) CHG: added one more layer to avoid error message (nbe=nbv) Sat, 08 Feb 2020 17:27:49 GMT Mathieu Morlighem [24562] * issm/trunk-jpl/src/m/classes/frictionjosh.m (modified) * issm/trunk-jpl/src/m/classes/initialization.m (modified) * issm/trunk-jpl/src/m/classes/thermal.m (modified) CHG: use 'universal' option to check field consistency for Josh's model Sat, 08 Feb 2020 05:10:21 GMT Mathieu Morlighem [24561] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) CHG: done for Josh Sat, 08 Feb 2020 04:37:02 GMT Mathieu Morlighem [24560] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) CHG: fixed bug Sat, 08 Feb 2020 01:38:02 GMT Eric.Larour [24559] * issm/trunk-jpl/src/m/shp/shpconcat.m (added) * issm/trunk-jpl/src/m/shp/shpdisp3d.m (added) CHG: diverse Sat, 08 Feb 2020 01:36:59 GMT Eric.Larour [24558] * issm/trunk-jpl/src/m/plot/plot_coastlines.m (modified) CHG: do not load coastline file, embedded the coastline data into the ... Sat, 08 Feb 2020 01:36:15 GMT Eric.Larour [24557] * issm/trunk-jpl/src/m/plot/applyoptions.m (modified) CHG: added shpdisp3d option. Sat, 08 Feb 2020 00:27:39 GMT Mathieu Morlighem [24556] * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs2/PentaInput2.cpp (modified) CHG: working on Josh's model Fri, 07 Feb 2020 18:42:21 GMT Mathieu Morlighem [24555] * issm/trunk-jpl/src/m/plot/plot_unit.m (modified) NEW: deal with edge data Fri, 07 Feb 2020 18:38:31 GMT Mathieu Morlighem [24554] * issm/trunk-jpl/src/m/contrib/elmer (added) * issm/trunk-jpl/src/m/contrib/elmer/readelmermesh.m (added) CHG: added mesh read capability Fri, 07 Feb 2020 18:36:39 GMT Mathieu Morlighem [24553] * issm/trunk-jpl/src/m/extrusion/project2d.m (modified) CHG: more flexible handling of projections Fri, 07 Feb 2020 18:17:02 GMT Mathieu Morlighem [24552] * issm/trunk-jpl/src/m/miscellaneous/transientrestart.m (modified) CHG added Enthalpy to restart Fri, 07 Feb 2020 18:12:27 GMT Mathieu Morlighem [24551] * issm/trunk-jpl/src/c/classes/Loads/Friction.cpp (modified) CHG: integrating Josh's commit Thu, 06 Feb 2020 16:39:36 GMT tsantos [24550] * issm/trunk-jpl/src/m/Makefile.am (modified) BUG: fixing dakota method path in Makefile.am Wed, 05 Feb 2020 18:44:36 GMT Mathieu Morlighem [24549] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) CHG: added perturbation Wed, 05 Feb 2020 18:22:07 GMT Mathieu Morlighem [24548] * issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) CHG: added perturbation to linear melt Wed, 05 Feb 2020 17:48:46 GMT Mathieu Morlighem [24547] * issm/trunk-jpl/src/m/contrib/morlighem/ad/rescalegradient.m (added) NEW: added rescaling of gradient based on mass matrix Wed, 05 Feb 2020 04:53:23 GMT Mathieu Morlighem [24546] * issm/trunk-jpl/src/m/classes/linearbasalforcings.py (modified) BUG: fixing linearbasalforcings.py Wed, 05 Feb 2020 03:38:33 GMT jdquinn [24545] * issm/trunk-jpl/src/m/classes/linearbasalforcings.m (modified) * issm/trunk-jpl/src/m/classes/linearbasalforcings.py (modified) CHG: Don’t retrieve perturbation_melting_rate in init (maybe add it ... Wed, 05 Feb 2020 00:38:15 GMT Mathieu Morlighem [24544] * issm/trunk-jpl/src/m/classes/linearbasalforcings.m (modified) * issm/trunk-jpl/src/m/classes/linearbasalforcings.py (modified) CHG: added perturbation Tue, 04 Feb 2020 22:56:44 GMT Mathieu Morlighem [24543] * issm/trunk-jpl/src/m/contrib/morlighem/ad (added) CHG: minor Tue, 04 Feb 2020 16:47:24 GMT Mathieu Morlighem [24542] * issm/trunk-jpl/externalpackages/codipack/install.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.12-pleiades.sh (added) CHG: compiling AD on pfe Fri, 31 Jan 2020 22:42:10 GMT Mathieu Morlighem [24541] * issm/trunk-jpl/src/m/qmu/postqmu.m (modified) * issm/trunk-jpl/src/m/qmu/postqmu.py (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromcluster.m (modified) * issm/trunk-jpl/src/m/solve/solve.m (modified) CHG: fixing a few things Fri, 31 Jan 2020 22:07:53 GMT Mathieu Morlighem [24540] * issm/trunk-jpl/src/m/qmu/postqmu.m (modified) * issm/trunk-jpl/src/m/qmu/postqmu.py (modified) * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/preqmu.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.py (modified) CHG: fixing python dakota Fri, 31 Jan 2020 21:53:46 GMT Mathieu Morlighem [24539] * issm/trunk-jpl/src/m/qmu/process_qmu_options.m (deleted) DEL: not used anymore Fri, 31 Jan 2020 21:53:16 GMT Mathieu Morlighem [24538] * issm/trunk-jpl/src/m/qmu/preqmu.m (modified) * issm/trunk-jpl/src/m/qmu/process_qmu_options.m (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromcluster.m (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromcluster.py (modified) * issm/trunk-jpl/src/m/solve/loadresultsfromdisk.m (modified) * issm/trunk-jpl/src/m/solve/solve.m (modified) * issm/trunk-jpl/src/m/solve/solve.py (modified) * issm/trunk-jpl/src/m/solve/solveiceocean.m (modified) CHG: no more qmu directory when running dakota Fri, 31 Jan 2020 19:51:49 GMT Mathieu Morlighem [24537] * issm/trunk-jpl/src/m/classes/qmu/dakota_method/dakota_method.m (modified) * issm/trunk-jpl/src/m/classes/qmu/dakota_method/dmeth_params_write.m (modified) * issm/trunk-jpl/src/m/classes/qmu/response_function.m (modified) CHG: minor estetics Fri, 31 Jan 2020 19:49:06 GMT Mathieu Morlighem [24536] * issm/trunk-jpl/src/m/classes/model.m (modified) CHG: fixed collapse for spcthickness that may not be set Fri, 31 Jan 2020 19:48:24 GMT Mathieu Morlighem [24535] * issm/trunk-jpl/src/m/plot/colormaps/paraview.m (modified) * issm/trunk-jpl/src/m/plot/manualcb.m (modified) CHG: fixed paraview colorbar and added some options to manualcb Thu, 30 Jan 2020 17:22:33 GMT jdquinn [24534] * issm/trunk-jpl/jenkins/linux64_ross_iceocean (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-iceocean (modified) CHG: Copied previous changes to Debian Linux build script ... Wed, 29 Jan 2020 18:46:21 GMT Mathieu Morlighem [24533] * issm/trunk-jpl/jenkins/linux64_ross_iceocean (modified) CHG: remove test4003 from the list while Dimitris and Helene are ... Wed, 29 Jan 2020 17:36:53 GMT Mathieu Morlighem [24532] * issm/trunk-jpl/src/m/classes/qmu/dakota_method (moved) * issm/trunk-jpl/src/m/classes/qmu/dakota_method/dakota_method.m (modified) CHG: renaming dakota folder to avoid issues with mcc Mon, 27 Jan 2020 21:30:55 GMT Mathieu Morlighem [24531] * issm/trunk-jpl/src/c/analyses/SealevelriseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) CHG: moved dsl param to analysis Mon, 27 Jan 2020 14:20:05 GMT bdef [24530] * issm/trunk-jpl/src/m/classes/SMBgradientscomponents.m (modified) * issm/trunk-jpl/src/m/contrib/defleurian/netCDF/export_netCDF.m (modified) BUG:fixing typo Fri, 24 Jan 2020 19:58:22 GMT Mathieu Morlighem [24529] * issm/trunk-jpl/src/c/analyses/HydrologyDCInefficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: fixing hydro sub time steps Wed, 22 Jan 2020 21:37:14 GMT Mathieu Morlighem [24528] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: minor Wed, 22 Jan 2020 21:32:22 GMT Mathieu Morlighem [24527] * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_schurcg.cpp (modified) CHG: fixing compilation depending on PETSc version Wed, 22 Jan 2020 17:51:44 GMT jdquinn [24526] * issm/trunk-jpl/externalpackages/petsc/install-3.7-linux.sh (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-codipack (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-dakota (modified) * issm/trunk-jpl/jenkins/ross-debian_linux-gia (modified) CHG: PETSc 3.11 is failing on NetCDF download Wed, 22 Jan 2020 12:50:38 GMT bdef [24525] * issm/trunk-jpl/src/m/classes/SMBgradientscomponents.m (modified) BUG:fix to the checkconsistency Fri, 17 Jan 2020 08:40:15 GMT bdef [24524] * issm/trunk-jpl/src/m/classes/clusters/stallo.m (modified) * issm/trunk-jpl/src/m/classes/clusters/stallo.py (modified) BUG:fix for queue selection on Stallo Wed, 15 Jan 2020 18:04:24 GMT jdquinn [24523] * issm/trunk-jpl/jenkins/ross-debian_linux-solid_earth (modified) CHG: Updating GMT version used (this appears to work locally) Wed, 15 Jan 2020 04:21:37 GMT jdquinn [24522] * issm/trunk-jpl/src/m/classes/slr.py (modified) CHG: Modification to short-circuit (missed closing parens) Wed, 15 Jan 2020 04:09:11 GMT jdquinn [24521] * issm/trunk-jpl/src/m/classes/slr.js (modified) * issm/trunk-jpl/src/m/classes/slr.py (modified) CHG: Modification to short-circuit Wed, 15 Jan 2020 00:41:50 GMT schlegel [24520] * issm/trunk-jpl/externalpackages/dakota/configs/6.2/CMakeLists.txt.libvars.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2/CMakeLists.txt.petsclibs.patch (modified) * issm/trunk-jpl/externalpackages/dakota/install-6.2-linux64-petsclibs.sh (added) * issm/trunk-jpl/externalpackages/dakota/install-6.2-linux64.sh (modified) CHG: add install for using petsc blas lapack, rename patch that uses ... Tue, 14 Jan 2020 22:33:03 GMT Mathieu Morlighem [24519] * issm/trunk-jpl/src/m/classes/slr.m (modified) * issm/trunk-jpl/src/m/classes/slr.py (modified) BUG: trying to fix problem in Erics commit Tue, 14 Jan 2020 22:23:41 GMT Mathieu Morlighem [24518] * issm/trunk-jpl/externalpackages/cmake/install.sh (modified) CHG: fixed cmake installation on ronne Tue, 14 Jan 2020 20:52:41 GMT tsantos [24517] * issm/trunk-jpl/src/m/contrib/morlighem/modeldata/interpMouginotAntTimeSeries1973to2018.m (modified) CHG: err as output Tue, 14 Jan 2020 20:47:42 GMT tsantos [24516] * issm/trunk-jpl/src/m/contrib/morlighem/modeldata/interpPaolo2015.m (modified) CHG: verification Tue, 14 Jan 2020 20:43:54 GMT tsantos [24515] * issm/trunk-jpl/src/m/contrib/tsantos/remesh.m (modified) CHG: verification Tue, 14 Jan 2020 20:42:55 GMT tsantos [24514] * issm/trunk-jpl/src/m/contrib/tsantos/mismip/gl_position.m (modified) CHG: verification Tue, 14 Jan 2020 20:40:01 GMT tsantos [24513] * issm/trunk-jpl/src/m/contrib/tsantos/mismip/gl_position_static.m (added) CHG: gl pos static Tue, 14 Jan 2020 16:50:09 GMT Mathieu Morlighem [24512] * issm/trunk-jpl/src/m/mesh/ExportGmsh.m (modified) * issm/trunk-jpl/src/m/mesh/ExportXml.m (added) NEW: added ExportXml.m