#
# ChangeLog for /
#
# Generated by Trac 1.4.3
# 05/01/25 10:54:13

Sun, 29 Sep 2019 21:08:28 GMT Mathieu Morlighem [24179]
	* issm/trunk-jpl/src/m/partition/AreaAverageOntoPartition.m (modified)
	* issm/trunk-jpl/src/m/partition/AreaAverageOntoPartition.py (modified)

	CHG: trying to fix qmu


Sun, 29 Sep 2019 19:05:02 GMT Mathieu Morlighem [24178]
	* issm/trunk-jpl/src/m/classes/qmu.py (modified)

	CHG: fixing python


Sat, 28 Sep 2019 19:10:01 GMT Eric.Larour [24177]
	* issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified)

	CHG: fixed UQ error for Ngia and Ugia (issue of rates vs no rates)


Sat, 28 Sep 2019 04:49:42 GMT Eric.Larour [24176]
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified)

	CHG: swapped the two partition vectors! This was creating some ...


Sat, 28 Sep 2019 00:14:29 GMT Eric.Larour [24175]
	* issm/trunk-jpl/src/c/modules/InputUpdateFromMatrixDakotax/InputUpdateFromMatrixDakotax.cpp (modified)

	CHG: diverse


Fri, 27 Sep 2019 23:45:38 GMT schlegel [24174]
	* issm/trunk-jpl/test/NightlyRun/test218.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test218.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test234.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test234.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test235.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test235.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test244.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test244.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test250.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test250.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test251.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test251.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test412.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test412.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test413.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test413.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test414.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test414.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test417.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test417.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test418.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test418.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test420.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test420.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test440.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test440.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test444.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test444.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test445.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test445.py (modified)

	CHG: fixed tests to deal with different partitioning schemes for ...


Fri, 27 Sep 2019 23:44:53 GMT schlegel [24173]
	* issm/trunk-jpl/src/m/classes/qmu.m (modified)
	* issm/trunk-jpl/src/m/classes/qmu.py (modified)
	* issm/trunk-jpl/src/m/partition/partitioner.m (modified)
	* issm/trunk-jpl/src/m/partition/partitioner.py (modified)
	* issm/trunk-jpl/src/m/qmu/importancefactors.m (modified)
	* issm/trunk-jpl/src/m/qmu/importancefactors.py (modified)

	CHG: added v and e partitions


Fri, 27 Sep 2019 22:48:22 GMT Eric.Larour [24172]
	* issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified)

	CHG: diverse


Fri, 27 Sep 2019 22:27:44 GMT Eric.Larour [24171]
	* issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified)

	CHG: diverse


Fri, 27 Sep 2019 22:23:32 GMT Eric.Larour [24170]
	* issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified)

	CHG: diverse


Fri, 27 Sep 2019 20:18:19 GMT Eric.Larour [24169]
	* issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified)

	CHG: diverse


Fri, 27 Sep 2019 17:52:43 GMT Eric.Larour [24168]
	* issm/trunk-jpl/src/c/modules/AverageOntoPartitionx/AverageOntoPartitionx.cpp (modified)
	* issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified)
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/m/classes/qmu.m (modified)

	CHG: replacing partitioning vector with vpartition and epartition to ...


Fri, 27 Sep 2019 17:51:51 GMT Eric.Larour [24167]
	* issm/trunk-jpl/src/m/qmu/postqmu.m (modified)

	CHG: do not error out, just warn if dakota error file has contents, ...


Fri, 27 Sep 2019 17:51:17 GMT Eric.Larour [24166]
	* issm/trunk-jpl/src/m/qmu/plot/plot_hist_norm.m (modified)

	CHG: missing default options.


Fri, 27 Sep 2019 17:50:57 GMT Eric.Larour [24165]
	* issm/trunk-jpl/src/m/classes/sealevelmodel.m (modified)

	CHG: added element transitions vector.


Thu, 26 Sep 2019 20:02:15 GMT schlegel [24164]
	* issm/trunk-jpl/test/NightlyRun/test218.py (modified)

	CHG: partition needs to be a columnn now


Thu, 26 Sep 2019 19:07:26 GMT Eric.Larour [24163]
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified)

	CHG: partition vector should be a column vector, not a row.


Thu, 26 Sep 2019 00:36:27 GMT schlegel [24162]
	* issm/trunk-jpl/src/m/classes/qmu.m (modified)
	* issm/trunk-jpl/src/m/classes/qmu.py (modified)

	CHG: add a check for column vector


Thu, 26 Sep 2019 00:20:59 GMT schlegel [24161]
	* issm/trunk-jpl/src/m/partition/partitioner.m (modified)
	* issm/trunk-jpl/src/m/partition/partitioner.py (modified)

	CHG: partitioner will return a column now


Wed, 25 Sep 2019 21:54:37 GMT wchu28 [24160]
	* issm/trunk-jpl/src/m/classes/clusters/sherlock.m (added)

	CHG: added classes/clusters/sherlock.m


Wed, 25 Sep 2019 21:54:07 GMT wchu28 [24159]
	* issm/trunk-jpl/externalpackages/petsc/install-3.9-sherlock.sh (added)

	NEW: added petsc/install-3.9-sherlock.sh


Tue, 24 Sep 2019 22:16:26 GMT Eric.Larour [24158]
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified)

	CHG: issue with size of partition vector.


Tue, 24 Sep 2019 21:21:33 GMT Eric.Larour [24157]
	* issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified)
	* issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp (modified)
	* issm/trunk-jpl/src/c/modules/InputUpdateFromMatrixDakotax/InputUpdateFromMatrixDakotax.cpp (modified)
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp (modified)
	* issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified)

	CHG: changes reqauired to run sea level solution update on Dakota + ...


Mon, 23 Sep 2019 22:59:09 GMT Eric.Larour [24156]
	* issm/trunk-jpl/src/m/classes/basin.m (modified)
	* issm/trunk-jpl/src/m/classes/boundary.m (modified)
	* issm/trunk-jpl/src/m/classes/mesh3dsurface.m (modified)
	* issm/trunk-jpl/src/m/classes/sealevelmodel.m (modified)

	CHG: changes to work towards a better sea level model representation ...


Mon, 23 Sep 2019 22:57:55 GMT Eric.Larour [24155]
	* issm/trunk-jpl/src/m/mesh/TwoDToThreeD.m (added)
	* issm/trunk-jpl/src/m/mesh/meshintersect3d.m (modified)
	* issm/trunk-jpl/src/m/mesh/modelmerge2d.m (added)
	* issm/trunk-jpl/src/m/mesh/modelmerge3d.m (added)

	CHG: diverse


Mon, 23 Sep 2019 18:55:05 GMT Eric.Larour [24154]
	* issm/trunk-jpl/src/m/geometry/AboveGround.m (added)

	CHG: needed to plot coastlines.


Tue, 17 Sep 2019 14:04:13 GMT Mathieu Morlighem [24153]
	* issm/trunk-jpl/src/c/classes/FemModel.h (modified)

	CHG: not needed anymore


Mon, 16 Sep 2019 09:57:07 GMT Mathieu Morlighem [24152]
	* issm/trunk-jpl/src/c/classes/Params/Parameters.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Params/Parameters.h (modified)

	CHG: simplifying parameters


Mon, 16 Sep 2019 09:28:58 GMT Mathieu Morlighem [24151]
	* issm/trunk-jpl/src/c/classes/Inputs/Inputs.h (modified)

	CHG: minor, not needed function


Mon, 16 Sep 2019 09:13:43 GMT Mathieu Morlighem [24150]
	* issm/trunk-jpl/test/Archives/Archive476.arch (modified)

	CHG: updated archive ./../Archives/Archive476.arch


Mon, 16 Sep 2019 09:13:31 GMT Mathieu Morlighem [24149]
	* issm/trunk-jpl/test/NightlyRun/test101.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test261.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test261.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test476.m (modified)

	CHG: bed commit, reverting


Mon, 16 Sep 2019 09:12:05 GMT Mathieu Morlighem [24148]
	* issm/trunk-jpl/test/NightlyRun/test101.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test261.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test261.py (modified)
	* issm/trunk-jpl/test/NightlyRun/test476.m (modified)

	CHG: updated archive ./../Archives/Archive476.arch


Mon, 16 Sep 2019 07:30:09 GMT rueckamp [24147]
	* issm/trunk-jpl/test/Archives/Archive476.arch (modified)

	CHG: updated archive


Mon, 16 Sep 2019 07:19:47 GMT nmokus [24146]
	* issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.h (modified)
	* issm/trunk-jpl/src/c/modules/Damagex/Damagex.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/m/classes/damage.m (modified)
	* issm/trunk-jpl/src/m/classes/damage.py (modified)

	NEW: arctan-based damage evolution law


Mon, 16 Sep 2019 07:00:54 GMT rueckamp [24145]
	* issm/trunk-jpl/src/c/analyses/FreeSurfaceBaseAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/StressbalanceVerticalAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Element.h (modified)
	* issm/trunk-jpl/src/c/modules/FloatingiceMeltingRatex/FloatingiceMeltingRatex.cpp (modified)
	* issm/trunk-jpl/src/c/modules/FloatingiceMeltingRatex/FloatingiceMeltingRatex.h (modified)
	* issm/trunk-jpl/src/c/modules/GeothermalFluxx/GeothermalFluxx.cpp (modified)
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/io/Marshalling/IoCodeConversions.cpp (modified)
	* issm/trunk-jpl/src/m/classes/basalforcingsbeckmanngoosse.m (added)
	* issm/trunk-jpl/test/Archives/Archive476.arch (added)
	* issm/trunk-jpl/test/NightlyRun/test476.m (added)

	NEW: Added BeckmannGoose parameterization for calculating basal melt ...


Wed, 11 Sep 2019 21:04:29 GMT Mathieu Morlighem [24144]
	* issm/trunk-jpl/test/Archives/Archive421.arch (modified)

	CHG: reverting archive


Wed, 11 Sep 2019 17:12:47 GMT seroussi [24143]
	* issm/trunk-jpl/test/NightlyRun/test4003.m (modified)

	CHG: minor tolerances test4003


Wed, 11 Sep 2019 17:04:03 GMT rueckamp [24142]
	* issm/trunk-jpl/test/Archives/Archive421.arch (modified)

	CHG: update archive421


Wed, 11 Sep 2019 16:40:40 GMT rueckamp [24141]
	* issm/trunk-jpl/src/m/classes/thermal.py (modified)

	CHG: fixing typos


Wed, 11 Sep 2019 16:30:58 GMT rueckamp [24140]
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Elements/DrainageFunctionWaterfraction.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/m/classes/thermal.js (modified)
	* issm/trunk-jpl/src/m/classes/thermal.m (modified)
	* issm/trunk-jpl/src/m/classes/thermal.py (modified)
	* issm/trunk-jpl/test/Archives/Archive345.arch (modified)

	CHG: add drainiceolumn and watercolumn_upperlimit as user input; ...


Wed, 11 Sep 2019 13:18:57 GMT rueckamp [24139]
	* issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)

	CHG: added ThicknessResidual as possible output to
	MasstransportAnalysis


Tue, 10 Sep 2019 17:41:47 GMT seroussi [24138]
	* issm/trunk-jpl/test/NightlyRun/test4001.m (modified)

	CHG: rebuild MITgcm from scratch each time


Mon, 09 Sep 2019 15:06:36 GMT Mathieu Morlighem [24137]
	* issm/trunk-jpl/src/c/classes/Elements/Element.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified)

	BUG: StabilizationParameterAnisotropic should not return a double


Mon, 09 Sep 2019 09:54:07 GMT rueckamp [24136]
	* issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/ThermalAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Element.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified)
	* issm/trunk-jpl/src/m/classes/thermal.js (modified)
	* issm/trunk-jpl/src/m/classes/thermal.m (modified)
	* issm/trunk-jpl/src/m/classes/thermal.py (modified)
	* issm/trunk-jpl/test/Archives/Archive331.arch (added)
	* issm/trunk-jpl/test/NightlyRun/test331.m (added)

	NEW: anisotropic SUPG for Enthalpy/Thermal Solver


Fri, 06 Sep 2019 11:09:55 GMT rueckamp [24135]
	* issm/trunk-jpl/src/m/miscellaneous/transientrestart.m (modified)

	CHG: added md.initialization.vel to transientrestart


Fri, 06 Sep 2019 11:06:01 GMT rueckamp [24134]
	* issm/trunk-jpl/src/m/classes/model.m (modified)

	CHG: extract function now keeps all TransientSolution time steps


Wed, 04 Sep 2019 00:44:49 GMT felicity [24133]
	* issm/trunk-jpl/src/c/analyses/HydrologyGlaDSAnalysis.cpp (modified)

	BUG: fixed assert for melt rate input in GlaDS


Wed, 04 Sep 2019 00:41:22 GMT felicity [24132]
	* issm/trunk-jpl/src/c/analyses/HydrologyGlaDSAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Channel.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Channel.h (modified)
	* issm/trunk-jpl/src/m/classes/initialization.m (modified)

	NEW: allow channel area initialization in GlaDS


Fri, 30 Aug 2019 18:58:34 GMT Mathieu Morlighem [24131]
	* issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/TriaRef.h (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.cpp (modified)

	CHG: not needed anymore


Fri, 30 Aug 2019 18:51:24 GMT Mathieu Morlighem [24130]
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.h (modified)

	CHG: better way of computing stiffness with DG


Thu, 29 Aug 2019 03:49:36 GMT seroussi [24129]
	* issm/trunk-jpl/test/NightlyRun/test4003.m (modified)

	CHG: minor tolerance


Wed, 28 Aug 2019 19:03:51 GMT seroussi [24128]
	* issm/trunk-jpl/test/Archives/Archive4003.arch (added)
	* issm/trunk-jpl/test/NightlyRun/test4003.m (modified)

	CHG: test 4003 now has some results to check


Wed, 28 Aug 2019 18:54:17 GMT seroussi [24127]
	* issm/trunk-jpl/jenkins/linux64_ross_iceocean (modified)

	CHG: new test to run for iceocean coupling


Wed, 28 Aug 2019 15:59:16 GMT seroussi [24126]
	* issm/trunk-jpl/src/c/modules/OceanExchangeDatax/OceanExchangeDatax.cpp (modified)

	FIX: fixed garbage ice time


Wed, 28 Aug 2019 15:58:59 GMT dmenemen [24125]
	* issm/trunk-jpl/test/MITgcm/input_4003/data (modified)

	imposing one-day run time for normal finish


Mon, 26 Aug 2019 20:14:09 GMT dmenemen [24124]
	* issm/trunk-jpl/test/NightlyRun/test4003.m (modified)

	hard-coding long integration period in MITgcm data


Mon, 26 Aug 2019 19:25:08 GMT dmenemen [24123]
	* issm/trunk-jpl/test/MITgcm/input_4003/data (added)
	* issm/trunk-jpl/test/MITgcm/input_4003/data_uncoupled (added)
	* issm/trunk-jpl/test/MITgcm/input_4003/eedata (modified)

	hard-coding integration period in MITgcm data file


Mon, 26 Aug 2019 18:27:09 GMT dmenemen [24122]
	* issm/trunk-jpl/test/NightlyRun/test4003.m (modified)

	updating test/NightlyRun/test4003.m
	to use its own MITgcm code and ...


Mon, 26 Aug 2019 18:26:19 GMT dmenemen [24121]
	* issm/trunk-jpl/test/MITgcm/build_4003.sh (modified)
	* issm/trunk-jpl/test/MITgcm/code_4003 (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/CPP_EEOPTIONS.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/CPP_OPTIONS.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/DIAGNOSTICS_SIZE.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/DIAG_OPTIONS.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/OBCS_OPTIONS.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/SHELFICE_OPTIONS.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/SIZE.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/STREAMICE_OPTIONS.h (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/cpl_issm.F (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/do_oceanic_phys.F (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/eeboot_minimal.F (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/eedie.F (added)
	* issm/trunk-jpl/test/MITgcm/code_4003/packages.conf (added)
	* issm/trunk-jpl/test/MITgcm/input_4003 (added)
	* issm/trunk-jpl/test/MITgcm/input_4003/eedata (added)
	* issm/trunk-jpl/test/MITgcm/input_4003/eedata_uncoupled (added)

	adding MITgcm code and input directories for experiment 4003


Sat, 24 Aug 2019 00:04:24 GMT tsantos [24120]
	* issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified)

	BUG: fixed matrix computation for Streamline Upwind stabilization
	scheme


Fri, 09 Aug 2019 21:20:22 GMT youngmc3 [24119]
	* issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified)
	* issm/trunk-jpl/src/c/classes/gauss/GaussPenta.cpp (modified)
	* issm/trunk-jpl/src/c/classes/gauss/GaussPenta.h (modified)

	CHG: (Total)CalvingFluxLevelset, (Total)CalvingMeltingFluxLevelset in
	3D


Tue, 06 Aug 2019 16:35:55 GMT nmokus [24118]
	* issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified)

	BUG: strain rate eigenvalues were returned instead of deviatoric
	stress'


Mon, 05 Aug 2019 16:38:22 GMT tsantos [24117]
	* issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified)

	CHG: extending subelement melt parameterizations to discontinuous ...


Tue, 30 Jul 2019 15:19:06 GMT bdef [24116]
	* issm/trunk-jpl/src/wrappers/javascript/io/FetchJavascriptData.cpp (modified)

	BUG: fixing data type


Tue, 30 Jul 2019 14:52:21 GMT bdef [24115]
	* issm/trunk-jpl/src/m/classes/clusters/generic.py (modified)
	* issm/trunk-jpl/src/m/classes/levelset.py (modified)
	* issm/trunk-jpl/src/m/classes/toolkits.py (modified)
	* issm/trunk-jpl/src/m/contrib/defleurian/paraview/exportVTK.py (modified)
	* issm/trunk-jpl/src/m/geometry/slope.py (modified)
	* issm/trunk-jpl/src/m/interp/averaging.py (modified)
	* issm/trunk-jpl/src/m/mesh/GetNodalFunctionsCoeff.py (modified)
	* issm/trunk-jpl/src/m/mesh/bamg.py (modified)
	* issm/trunk-jpl/src/m/mesh/roundmesh.py (modified)
	* issm/trunk-jpl/src/m/mesh/triangle.py (modified)
	* issm/trunk-jpl/src/m/modules/BamgMesher.py (modified)
	* issm/trunk-jpl/src/m/plot/plot_unit.py (modified)
	* issm/trunk-jpl/src/m/solve/loadresultsfromcluster.py (modified)
	* issm/trunk-jpl/src/m/solve/loadresultsfromdisk.py (modified)
	* issm/trunk-jpl/src/m/solve/marshall.py (modified)

	BUG:fixing typos for py3 compatibility


Tue, 30 Jul 2019 14:46:01 GMT bdef [24114]
	* issm/trunk-jpl/src/wrappers/python/io/FetchPythonData.cpp (modified)

	BUG: fixing typos


Tue, 30 Jul 2019 14:18:02 GMT bdef [24113]
	* issm/trunk-jpl/src/c/bamg/BamgOpts.cpp (modified)
	* issm/trunk-jpl/src/c/bamg/BamgOpts.h (modified)
	* issm/trunk-jpl/src/c/bamg/Geometry.cpp (modified)
	* issm/trunk-jpl/src/c/modules/Bamgx/Bamgx.cpp (modified)

	CHG: change the treatment of hVertices to vector


Tue, 30 Jul 2019 14:16:33 GMT bdef [24112]
	* issm/trunk-jpl/src/wrappers/javascript/io/FetchJavascriptData.cpp (modified)
	* issm/trunk-jpl/src/wrappers/matlab/io/FetchMatlabData.cpp (modified)
	* issm/trunk-jpl/src/wrappers/python/io/FetchPythonData.cpp (modified)

	CHG: change the treatment of hVertices to vector


Mon, 29 Jul 2019 14:49:22 GMT Mathieu Morlighem [24111]
	* issm/trunk-jpl/src/m/parameterization/killberg.m (modified)

	CHG: minor


Mon, 29 Jul 2019 14:39:01 GMT Mathieu Morlighem [24110]
	* issm/trunk-jpl/src/m/parameterization/killberg.m (added)

	CHG: created handy routine to remove ice


Mon, 29 Jul 2019 12:27:37 GMT Mathieu Morlighem [24109]
	* issm/trunk-jpl/src/c/modules/SystemMatricesx/SystemMatricesx.cpp (modified)

	BUG: did not mean to commit this


Mon, 29 Jul 2019 12:26:20 GMT Mathieu Morlighem [24108]
	* issm/trunk-jpl/src/c/classes/Contours.h (modified)
	* issm/trunk-jpl/src/c/modules/SystemMatricesx/SystemMatricesx.cpp (modified)
	* issm/trunk-jpl/src/c/solutionsequences/solutionsequence_glads_nonlinear.cpp (modified)

	CHG: minor


Mon, 29 Jul 2019 09:00:49 GMT Mathieu Morlighem [24107]
	* issm/trunk-jpl/src/wrappers/matlab/io/FetchMatlabData.cpp (modified)
	* issm/trunk-jpl/src/wrappers/python/io/FetchPythonData.cpp (modified)

	CHG: minor cosmetics


Sat, 27 Jul 2019 09:50:57 GMT Mathieu Morlighem [24106]
	* issm/trunk-jpl/src/c/classes/Constraints/SpcStatic.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/Inputs.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/Inputs.h (modified)

	CHG: minor


Tue, 23 Jul 2019 21:43:38 GMT Mathieu Morlighem [24105]
	* issm/trunk-jpl/test/NightlyRun/test215.js (modified)
	* issm/trunk-jpl/test/NightlyRun/test215.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test215.py (modified)

	CHG: lower solver residue


Mon, 22 Jul 2019 23:51:26 GMT schlegel [24104]
	* issm/trunk-jpl/src/c/shared/Elements/NyeCO2.cpp (modified)

	BUG: fixing spacing error in Nye file


Mon, 22 Jul 2019 21:15:42 GMT schlegel [24103]
	* issm/trunk-jpl/src/c/shared/Elements/NyeCO2.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Elements/NyeH2O.cpp (modified)

	CHG: update some warnings for the Nye functions


Mon, 22 Jul 2019 21:14:46 GMT schlegel [24102]
	* issm/trunk-jpl/test/NightlyRun/test237.py (modified)

	CHG: relax tol slightly for mac python nightlies


Mon, 22 Jul 2019 21:05:11 GMT schlegel [24101]
	* issm/trunk-jpl/src/m/materials/nye.m (modified)
	* issm/trunk-jpl/src/m/materials/nye.py (modified)

	CHG: minor updates to nye functions


Mon, 22 Jul 2019 06:35:04 GMT Mathieu Morlighem [24100]
	* issm/trunk-jpl/src/m/classes/toolkits.m (modified)

	CHG: automatically reset recoveryanalysis if old models are loaded


Thu, 18 Jul 2019 08:55:59 GMT Mathieu Morlighem [24099]
	* issm/trunk-jpl/src/c/Makefile.am (modified)
	* issm/trunk-jpl/src/c/cores/controlad_core.cpp (deleted)
	* issm/trunk-jpl/src/c/cores/controladm1qn3_core.cpp (modified)
	* issm/trunk-jpl/src/c/cores/cores.h (modified)

	CHG: removing cores/controlad_core.cpp, dead branche


Wed, 17 Jul 2019 09:15:35 GMT Mathieu Morlighem [24098]
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateNodes.cpp (modified)

	CHG: fixed penalties for transient runs


Wed, 17 Jul 2019 08:18:19 GMT Mathieu Morlighem [24097]
	* issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified)
	* issm/trunk-jpl/src/c/cores/masstransport_core.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)

	BUG: fixing new mass transport scheme


Wed, 17 Jul 2019 00:01:27 GMT schlegel [24096]
	* issm/trunk-jpl/src/m/materials/nye.py (modified)
	* issm/trunk-jpl/test/Archives/Archive346.arch (modified)
	* issm/trunk-jpl/test/Archives/Archive347.arch (modified)
	* issm/trunk-jpl/test/NightlyRun/test346.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test346.py (added)
	* issm/trunk-jpl/test/NightlyRun/test347.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test347.py (added)
	* issm/trunk-jpl/test/Par/SquareSheetConstrained.py (modified)
	* issm/trunk-jpl/test/Par/SquareSheetConstrainedCO2.par (modified)
	* issm/trunk-jpl/test/Par/SquareSheetConstrainedCO2.py (added)

	CHG: update nye check for 3 steps and add python tests


Tue, 16 Jul 2019 00:50:28 GMT schlegel [24095]
	* issm/trunk-jpl/src/c/shared/Elements/PddSurfaceMassBalance.cpp (modified)

	CHG: revert to older pdd scaling for ice


Tue, 16 Jul 2019 00:48:47 GMT schlegel [24094]
	* issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified)

	BUG: need to check for ispdd set factors before using inputs


Mon, 15 Jul 2019 23:42:51 GMT schlegel [24093]
	* issm/trunk-jpl/src/c/analyses/ThermalAnalysis.cpp (modified)
	* issm/trunk-jpl/test/Archives/Archive346.arch (added)
	* issm/trunk-jpl/test/Archives/Archive347.arch (added)
	* issm/trunk-jpl/test/NightlyRun/test346.m (added)
	* issm/trunk-jpl/test/NightlyRun/test347.m (added)
	* issm/trunk-jpl/test/Par/SquareSheetConstrainedCO2.par (added)

	CHG: add test for Mars nye capability


Mon, 15 Jul 2019 23:40:10 GMT schlegel [24092]
	* issm/trunk-jpl/src/m/classes/materials.py (modified)
	* issm/trunk-jpl/src/m/classes/matice.js (modified)
	* issm/trunk-jpl/src/m/classes/matice.py (modified)
	* issm/trunk-jpl/src/m/materials/nye.m (modified)

	CHG: minor error in nye check for temp out of range


Mon, 15 Jul 2019 19:50:06 GMT Mathieu Morlighem [24091]
	* issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Inputs/TriaInput.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.cpp (modified)
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateNodes.cpp (modified)

	CHG: more flexible masstransport


Mon, 15 Jul 2019 12:16:17 GMT Mathieu Morlighem [24090]
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.cpp (modified)

	BUG: do not re-write flux degree


Mon, 15 Jul 2019 11:40:13 GMT Mathieu Morlighem [24089]
	* issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Element.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tetra.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified)
	* issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Channel.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Moulin.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Moulin.h (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Neumannflux.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Riftfront.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Riftfront.h (modified)
	* issm/trunk-jpl/src/c/classes/gauss/GaussTria.cpp (modified)

	CHG: working on P0DG


Mon, 15 Jul 2019 02:14:42 GMT Mathieu Morlighem [24088]
	* issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.cpp (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Numericalflux.h (modified)
	* issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateNodes.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)

	CHG: improved numerical flux calculation and working on adding P0DG


Fri, 12 Jul 2019 15:23:06 GMT Mathieu Morlighem [24087]
	* issm/trunk-jpl/test/NightlyRun/test405.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test405.py (modified)

	CHG: lower solver residue for penalty model


Fri, 12 Jul 2019 15:21:57 GMT Mathieu Morlighem [24086]
	* issm/trunk-jpl/src/c/modules/Solverx/Solverx.cpp (modified)

	BUG: for AD


Fri, 12 Jul 2019 02:28:09 GMT jdquinn [24085]
	* issm/trunk-jpl/etc/environment.sh (modified)

	CHG: Modified *append/*prepend functions to deal with case where ...


Thu, 11 Jul 2019 19:07:30 GMT Mathieu Morlighem [24084]
	* issm/trunk-jpl/test/NightlyRun/test205.js (modified)
	* issm/trunk-jpl/test/NightlyRun/test205.m (modified)
	* issm/trunk-jpl/test/NightlyRun/test205.py (modified)

	CHG: lower solver residue threshold if penalties are on


Thu, 11 Jul 2019 18:53:30 GMT Mathieu Morlighem [24083]
	* issm/trunk-jpl/src/c/modules/Solverx/Solverx.cpp (modified)

	CHG: taking care of case when ||F|| = 0


Thu, 11 Jul 2019 18:37:13 GMT Mathieu Morlighem [24082]
	* issm/trunk-jpl/src/c/modules/ParseToolkitsOptionsx/ParseToolkitsOptionsx.cpp (modified)
	* issm/trunk-jpl/src/c/modules/Solverx/Solverx.cpp (modified)
	* issm/trunk-jpl/src/c/modules/Solverx/Solverx.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/c/solutionsequences/convergence.cpp (modified)
	* issm/trunk-jpl/src/c/solutionsequences/solutionsequence_linear.cpp (modified)
	* issm/trunk-jpl/src/m/classes/toolkits.js (modified)
	* issm/trunk-jpl/src/m/classes/toolkits.m (modified)
	* issm/trunk-jpl/src/m/classes/toolkits.py (modified)

	NEW: added md.toolkits.RecoveryAnalysis, which is a recovery mode ...


Thu, 11 Jul 2019 15:12:06 GMT Mathieu Morlighem [24081]
	* issm/trunk-jpl/test/Archives/Archive355.arch (modified)

	CHG: updated archive


Thu, 11 Jul 2019 15:10:15 GMT Mathieu Morlighem [24080]
	* issm/trunk-jpl/src/c/Makefile.am (modified)
	* issm/trunk-jpl/src/c/analyses/HydrologyGlaDSAnalysis.cpp (modified)
	* issm/trunk-jpl/src/c/analyses/HydrologyGlaDSAnalysis.h (modified)
	* issm/trunk-jpl/src/c/classes/Loads/Channel.cpp (modified)
	* issm/trunk-jpl/src/c/cores/hydrology_core.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/Enum.vim (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified)
	* issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified)
	* issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified)
	* issm/trunk-jpl/src/c/solutionsequences/convergence.cpp (modified)
	* issm/trunk-jpl/src/c/solutionsequences/solutionsequence_glads_nonlinear.cpp (added)
	* issm/trunk-jpl/src/c/solutionsequences/solutionsequence_shakti_nonlinear.cpp (modified)
	* issm/trunk-jpl/src/c/solutionsequences/solutionsequences.h (modified)

	NEW: improved GlaDS solution sequence to be consistent with Elmer