# # ChangeLog for / # # Generated by Trac 1.4.3 # 04/30/25 07:40:56 Sat, 12 Mar 2016 00:23:28 GMT Mathieu Morlighem [20314] * issm/trunk-jpl/jenkins/linux64_ross_ad (modified) CHG: reverted back Sat, 12 Mar 2016 00:21:48 GMT Mathieu Morlighem [20313] * issm/trunk-jpl/test/NightlyRun/test3015.py (modified) * issm/trunk-jpl/test/NightlyRun/test3020.py (modified) BUG: python indices start at 0 Fri, 11 Mar 2016 23:57:46 GMT Mathieu Morlighem [20312] * issm/trunk-jpl/jenkins/linux64_ross_ad (modified) CHG: deactivating some tests Fri, 11 Mar 2016 23:50:22 GMT Mathieu Morlighem [20311] * issm/trunk-jpl/test/NightlyRun/test3015.py (modified) BUG: no more issmgslsolver Fri, 11 Mar 2016 23:49:26 GMT Mathieu Morlighem [20310] * issm/trunk-jpl/test/NightlyRun/test3015.py (modified) BUG: bad string formatting in print Fri, 11 Mar 2016 23:03:14 GMT Mathieu Morlighem [20309] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) BUG: fixing memory leak Fri, 11 Mar 2016 23:00:45 GMT Mathieu Morlighem [20308] * issm/trunk-jpl/test/NightlyRun/test273.m (modified) CHG: added semi colon to avoid md print Fri, 11 Mar 2016 21:13:46 GMT Mathieu Morlighem [20307] * issm/trunk-jpl/src/c/analyses/LevelsetAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: finished calving dev for STore paper Wed, 09 Mar 2016 18:13:47 GMT seroussi [20306] * issm/trunk-jpl/src/m/classes/frictiontemp.m (modified) BUG: missing extrude function in frictiontemp Wed, 09 Mar 2016 17:22:26 GMT bdef [20305] * issm/trunk-jpl/src/wrappers/InterpFromMesh2d/InterpFromMesh2d.cpp (modified) * issm/trunk-jpl/src/wrappers/InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.cpp (modified) * issm/trunk-jpl/src/wrappers/PointCloudFindNeighbors/PointCloudFindNeighbors.cpp (modified) BUG: adding xdelete for some pointers Wed, 09 Mar 2016 16:33:51 GMT Mathieu Morlighem [20304] * issm/trunk-jpl/src/wrappers/InterpFromGridToMesh/InterpFromGridToMesh.cpp (modified) BUG: releasing memory Wed, 09 Mar 2016 16:23:53 GMT Mathieu Morlighem [20303] * issm/trunk-jpl/src/wrappers/InterpFromGridToMesh/InterpFromGridToMesh.cpp (modified) CHG: checking number of inputs Wed, 09 Mar 2016 07:32:40 GMT bdef [20302] * issm/trunk-jpl/src/m/classes/model.py (modified) CHG: adding vilje to model Wed, 09 Mar 2016 07:06:04 GMT bdef [20301] * issm/trunk-jpl/src/m/classes/clusters/vilje.m (modified) * issm/trunk-jpl/src/m/classes/clusters/vilje.py (added) NEW: Adding vilje (UiB) cluster for python Wed, 09 Mar 2016 03:22:54 GMT Eric.Larour [20300] * issm/trunk-jpl/src/m/Makefile.am (modified) CHG: only install issm-bin.js Wed, 09 Mar 2016 03:22:33 GMT Eric.Larour [20299] * issm/trunk-jpl/src/m/solve/loadresultsfrombuffer.js (modified) * issm/trunk-jpl/src/m/solve/solve.js (modified) CHG: different prototype for loadresultsfrombuffer. Returns model now ... Mon, 07 Mar 2016 18:56:04 GMT dlcheng [20298] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) CHG (javascript): Adding np parameter to request bin. Sat, 05 Mar 2016 04:48:49 GMT Eric.Larour [20297] * issm/trunk-jpl/src/m/classes/outputdefinition.js (modified) * issm/trunk-jpl/src/m/classes/qmu.js (modified) CHG: minor changes, adjustmnets. Sat, 05 Mar 2016 04:48:10 GMT Eric.Larour [20296] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) CHG: unhooking download option. Fri, 04 Mar 2016 22:17:39 GMT Eric.Larour [20295] * issm/trunk-jpl/src/m/Makefile.am (modified) * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) * issm/trunk-jpl/src/m/classes/maskpsl.js (added) * issm/trunk-jpl/src/m/classes/maskpsl.m (modified) * issm/trunk-jpl/src/m/classes/outputdefinition.m (modified) CHG (JS): missing classes to allow marshalling of model in javascript. Fri, 04 Mar 2016 04:21:17 GMT glperez [20294] * issm/trunk-jpl/jenkins/macosx_pine-island_dakota (modified) CHG: Added CMake to MacOSX Dakota build. Fri, 04 Mar 2016 04:00:41 GMT glperez [20293] * issm/trunk-jpl/externalpackages/boost/install-1.55-macosx-el_capitan.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-6.2-macosx-el_capitan.sh (deleted) * issm/trunk-jpl/externalpackages/dakota/install-6.2-macosx64.sh (modified) * issm/trunk-jpl/jenkins/macosx_pine-island_dakota (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Modified Dakota flags to fall in line with the 6.2 MacOSX ... Fri, 04 Mar 2016 02:12:00 GMT Eric.Larour [20292] * issm/trunk-jpl/src/m/js/writejscellarray.m (modified) CHG: fixed writejscellarray routine. Fri, 04 Mar 2016 02:11:36 GMT Eric.Larour [20291] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) CHG: minor fold issue Thu, 03 Mar 2016 05:20:12 GMT dlcheng [20290] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) CHG (javascript): Adding option download functionality for saving bin ... Thu, 03 Mar 2016 04:18:26 GMT dlcheng [20289] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) * issm/trunk-jpl/src/m/solve/solve.js (modified) CHG (javascript): Updates for js upload and run job parameters. Wed, 02 Mar 2016 17:53:47 GMT Eric.Larour [20288] * issm/trunk-jpl/src/m/classes/flowequation.py (modified) * issm/trunk-jpl/src/m/classes/stressbalance.py (modified) CHG: bending over backwards with Python to check NaN vs Array! Wed, 02 Mar 2016 04:56:57 GMT glperez [20287] * issm/trunk-jpl/jenkins/linux64_ross_se (modified) CHG: Activating SolidEarth Python for Jenkins. Wed, 02 Mar 2016 04:19:53 GMT Eric.Larour [20286] * issm/trunk-jpl/test/NightlyRun/test2002.py (modified) CHG: test2002 now working! Wed, 02 Mar 2016 04:19:17 GMT Eric.Larour [20285] * issm/trunk-jpl/src/m/contrib/larour/resultstomatrix.m (modified) CHG: time is in years! do not convert back to seconds! Wed, 02 Mar 2016 04:18:48 GMT Eric.Larour [20284] * issm/trunk-jpl/src/m/boundaryconditions/love_numbers.py (modified) CHG: fixed love_numbers python routine used in test2002 now. Wed, 02 Mar 2016 04:18:15 GMT Eric.Larour [20283] * issm/trunk-jpl/src/m/coordsystems/gmtmask.m (modified) * issm/trunk-jpl/src/m/coordsystems/gmtmask.py (modified) CHG: gmtmask.py: issue with indexing! (matlab bias) gmtmask.py and ... Wed, 02 Mar 2016 04:17:01 GMT Eric.Larour [20282] * issm/trunk-jpl/src/m/classes/flowequation.py (modified) CHG: issue with vertexequation not being able to = NaN Wed, 02 Mar 2016 04:16:35 GMT Eric.Larour [20281] * issm/trunk-jpl/src/m/classes/slr.m (modified) * issm/trunk-jpl/src/m/classes/slr.py (modified) CHG: we were marshalling degacc twice! Wed, 02 Mar 2016 04:16:04 GMT Eric.Larour [20280] * issm/trunk-jpl/src/m/classes/stressbalance.py (modified) CHG: fixed issue with loading force, which can be NaN! Wed, 02 Mar 2016 04:15:44 GMT Eric.Larour [20279] * issm/trunk-jpl/src/m/classes/maskpsl.py (modified) CHG: fixed diverse issues with the new class in python. Wed, 02 Mar 2016 04:15:13 GMT Eric.Larour [20278] * issm/trunk-jpl/src/m/classes/mesh3dsurface.py (modified) CHG: fixes some issues with marshall routine. Wed, 02 Mar 2016 04:14:45 GMT Eric.Larour [20277] * issm/trunk-jpl/src/m/mesh/planet/gmsh/gmshplanet.py (modified) CHG: took out verbose statement left by mistake. Wed, 02 Mar 2016 04:13:56 GMT Eric.Larour [20276] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG (JS): udpated special constructor for javascript exexcutable. Tue, 01 Mar 2016 23:33:03 GMT Eric.Larour [20275] * issm/trunk-jpl/src/m/mesh/planet/gmsh/gmshplanet.py (modified) CHG: fixed indexing issue in retrieval of mesh. Tue, 01 Mar 2016 03:54:47 GMT Mathieu Morlighem [20274] * issm/trunk-jpl/src/m/plot/quiver_colorbar.m (modified) CHG: need to scale positions by max Mon, 29 Feb 2016 19:33:33 GMT jbondzio [20273] * issm/trunk-jpl/test/Archives/Archive327.nc (modified) BUG: update archive for previous commit Mon, 29 Feb 2016 18:47:12 GMT jbondzio [20272] * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) BUG: CreatePVectorSheet uses enthalpy values interpolated at gauss- ... Mon, 29 Feb 2016 00:02:08 GMT dlcheng [20271] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) CHG (javascript): Now sending cloud solver request .bin as binary data. Sun, 28 Feb 2016 05:17:19 GMT Eric.Larour [20270] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) * issm/trunk-jpl/src/m/solve/solve.js (modified) CHG (JS): - successful processing of the results when calling a ... Sun, 28 Feb 2016 03:17:57 GMT Eric.Larour [20269] * issm/trunk-jpl/src/m/solve/solve.js (modified) CHG (JS): improved solve.js that uses the local and generic clusters, ... Sun, 28 Feb 2016 03:15:30 GMT Eric.Larour [20268] * issm/trunk-jpl/src/m/solve/marshall.js (modified) CHG: declare variables! :) Sun, 28 Feb 2016 03:15:07 GMT Eric.Larour [20267] * issm/trunk-jpl/src/m/classes/clusters/generic.js (modified) CHG: new simplified interface to the generic cluster class, with just ... Sun, 28 Feb 2016 03:14:19 GMT Eric.Larour [20266] * issm/trunk-jpl/src/m/classes/clusters/pfe.m (modified) CHG: new multiple model capability (for sea level model). In ... Sun, 28 Feb 2016 03:13:29 GMT Eric.Larour [20265] * issm/trunk-jpl/src/m/classes/initialization.js (modified) CHG: issue with slicing vx, vy and vz when they are NaN! Will have to ... Sun, 28 Feb 2016 03:12:51 GMT Eric.Larour [20264] * issm/trunk-jpl/src/m/classes/sealevelmodel.m (modified) CHG: no patching anymore in the constructor of the sealevelmodel class. Sun, 28 Feb 2016 03:12:26 GMT Eric.Larour [20263] * issm/trunk-jpl/src/m/classes/masstransport.m (modified) CHG: in writeasjsfile, fixed issue with hdyrostatic_adustment being ... Sun, 28 Feb 2016 03:11:54 GMT Eric.Larour [20262] * issm/trunk-jpl/src/m/classes/slr.m (modified) CHG: updated saveasjsfile routine for slr class. Sun, 28 Feb 2016 03:11:03 GMT Eric.Larour [20261] * issm/trunk-jpl/src/m/classes/slr.js (modified) CHG (JS): fixed huge memory issue when declaring the slr.js fields. Sun, 28 Feb 2016 03:10:33 GMT Eric.Larour [20260] * issm/trunk-jpl/src/m/classes/groundingline.m (modified) CHG: check only on places that are on the ice! Not on the ocean. Sun, 28 Feb 2016 03:10:02 GMT Eric.Larour [20259] * issm/trunk-jpl/src/m/consistency/checkfield.js (modified) * issm/trunk-jpl/src/m/consistency/ismodelselfconsistent.js (modified) CHG (JS): added sea level rise solution option. Better check on ... Sun, 28 Feb 2016 03:09:16 GMT Eric.Larour [20258] * issm/trunk-jpl/src/m/plot/plot_overlay.js (modified) CHG (JS): minor typo. Sun, 28 Feb 2016 03:08:07 GMT Eric.Larour [20257] * issm/trunk-jpl/src/m/classes/trans.js (modified) CHG (JS): update transient class to enable solving in javascript. Sun, 28 Feb 2016 03:07:49 GMT Eric.Larour [20256] * issm/trunk-jpl/src/m/classes/transient.m (modified) CHG: minor comment in the disp routine. Sun, 28 Feb 2016 03:07:19 GMT Eric.Larour [20255] * issm/trunk-jpl/src/m/io/fileptr.js (modified) CHG: added a check that makes sure the memory increment is sufficient. Sun, 28 Feb 2016 03:06:59 GMT Eric.Larour [20254] * issm/trunk-jpl/src/m/js/writejscellarray.m (added) CHG (JS): new writejscellarray for transitions in slr class. Sun, 28 Feb 2016 03:06:30 GMT Eric.Larour [20253] * issm/trunk-jpl/src/m/os/issmbbftpin.m (modified) * issm/trunk-jpl/src/m/os/issmbbftpout.m (modified) CHG: changed hardcoded bbftp pleiades ips. Sat, 27 Feb 2016 19:04:46 GMT adhikari [20252] * issm/trunk-jpl/src/m/geometry/GetAreasSphericalTria.m (added) NEW: function to compute spherical traingles Sat, 27 Feb 2016 00:00:59 GMT Eric.Larour [20251] * issm/trunk-jpl/src/m/Makefile.am (modified) CHG: build issm-bin target. Fri, 26 Feb 2016 23:42:17 GMT dlcheng [20250] * issm/trunk-jpl/src/m/plot/plot_overlay.js (modified) CHG (javascript): Removing extra console log. Fri, 26 Feb 2016 03:19:41 GMT schlegel [20249] * issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceSIAAnalysis.cpp (modified) CHG: clean up some memory Thu, 25 Feb 2016 23:19:32 GMT Mathieu Morlighem [20248] * issm/trunk-jpl/etc/environment.sh (modified) * issm/trunk-jpl/externalpackages/cvs (added) * issm/trunk-jpl/externalpackages/cvs/install.sh (added) NEW: added cvs Thu, 25 Feb 2016 23:15:08 GMT Mathieu Morlighem [20247] * issm/trunk-jpl/test/NightlyRun/test124.m (modified) CHG: relaxing tolerances Thu, 25 Feb 2016 20:16:25 GMT schlegel [20246] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: add area fuctions to responses case statement Thu, 25 Feb 2016 18:01:48 GMT Mathieu Morlighem [20245] * issm/trunk-jpl/test/NightlyRun/test404.m (modified) * issm/trunk-jpl/test/NightlyRun/test404.py (modified) CHG: relaxing tolerances on Pressure FS Thu, 25 Feb 2016 17:43:23 GMT Mathieu Morlighem [20244] * issm/trunk-jpl/test/NightlyRun/test350.m (modified) CHG: changed wrong tolerance' Thu, 25 Feb 2016 17:15:09 GMT Mathieu Morlighem [20243] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) * issm/trunk-jpl/test/NightlyRun/test237.m (modified) * issm/trunk-jpl/test/NightlyRun/test237.py (modified) * issm/trunk-jpl/test/NightlyRun/test350.m (modified) CHG: fixing Mac tests on jenkins Thu, 25 Feb 2016 16:47:13 GMT Mathieu Morlighem [20242] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) CHG: excluding dakota tests Thu, 25 Feb 2016 07:43:16 GMT glperez [20241] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) CHG: I think the MPICH install script for OSX is causing petsc to seg ... Thu, 25 Feb 2016 06:27:37 GMT glperez [20240] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) * issm/trunk-jpl/jenkins/macosx_pine-island_dakota (added) CHG: Now we have two config scripts. One for Dakota and one for not. Thu, 25 Feb 2016 02:31:52 GMT glperez [20239] * issm/trunk-jpl/jenkins/linux64_ross_iceocean (added) ADD: New Jenkins iceocean config. Thu, 25 Feb 2016 00:14:27 GMT Mathieu Morlighem [20238] * issm/trunk-jpl/jenkins/linux64_ross_gia (modified) CHG: added gmsh Wed, 24 Feb 2016 23:49:38 GMT Mathieu Morlighem [20237] * issm/trunk-jpl/jenkins/linux64_ross_gia (modified) CHG: added autotools Wed, 24 Feb 2016 23:16:50 GMT glperez [20236] * issm/trunk-jpl/jenkins/linux64_ross_gia (added) ADD: Ross GIA test. Wed, 24 Feb 2016 21:15:58 GMT schlegel [20235] * issm/trunk-jpl/src/c/cores/sealevelrise_core.cpp (modified) * issm/trunk-jpl/src/c/main/issm_slr.cpp (modified) CHG: add int cast to make intel compiler happy Wed, 24 Feb 2016 20:30:21 GMT dlcheng [20234] * issm/trunk-jpl/src/m/plot/plot_mesh.js (modified) * issm/trunk-jpl/src/m/plot/plot_overlay.js (modified) * issm/trunk-jpl/src/m/plot/plot_unit.js (modified) CHG (javascript): Dynamic height scaling for 3d/2d meshes Tue, 23 Feb 2016 03:56:27 GMT glperez [20233] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) CHG: changed MPICH script to 3.0 MacOSX Yosemite. Tue, 23 Feb 2016 02:58:18 GMT glperez [20232] * issm/trunk-jpl/externalpackages/dakota/install-6.2-macosx-el_capitan.sh (modified) CHG: Removed comment line from download. Tue, 23 Feb 2016 02:40:28 GMT glperez [20231] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) CHG: removed CMake from MacOSX build Jenkins. Tue, 23 Feb 2016 01:50:52 GMT glperez [20230] * issm/trunk-jpl/jenkins/macosx_pine-island (modified) CHG: Install scripts changed for Pine_Island to El Capitan Boost and ... Tue, 23 Feb 2016 01:48:26 GMT glperez [20229] * issm/trunk-jpl/externalpackages/boost/install-1.55-macosx-el_capitan.sh (added) * issm/trunk-jpl/externalpackages/dakota/install-6.2-macosx-el_capitan.sh (added) ADD: New installation scripts for Boost and Dakota for MacOSX 10.11. Mon, 22 Feb 2016 20:18:35 GMT schlegel [20228] * issm/trunk-jpl/src/m/classes/clusters/pfe.m (modified) CHG: revert back pfe.m Mon, 22 Feb 2016 20:17:06 GMT schlegel [20227] * issm/trunk-jpl/src/m/classes/clusters/lonestar.m (modified) * issm/trunk-jpl/src/m/classes/clusters/pfe.m (modified) CHG: add batch to lonestar Mon, 22 Feb 2016 07:27:58 GMT dlcheng [20226] * issm/trunk-jpl/test/NightlyRun/test2002.py (modified) CHG: test2002.py syntax fixes, ready for solve validation Mon, 22 Feb 2016 07:25:36 GMT dlcheng [20225] * issm/trunk-jpl/src/m/classes/maskpsl.py (added) * issm/trunk-jpl/src/m/classes/mesh3dsurface.py (modified) * issm/trunk-jpl/src/m/coordsystems/gmtmask.py (added) ADD: maskpsl and gmtmask python versions. CHG: mesh3dsurface.py ... Sat, 20 Feb 2016 00:28:48 GMT dlcheng [20224] * issm/trunk-jpl/test/NightlyRun/test2002.py (modified) CHG: Intermediate fixes for syntax and includes, work in progress Sat, 20 Feb 2016 00:26:56 GMT dlcheng [20223] * issm/trunk-jpl/src/m/classes/mesh3dsurface.py (added) * issm/trunk-jpl/src/m/mesh/planet/gmsh/gmshplanet.py (modified) ADD: mesh3dsurface python version. CHG: gmshplanet python fscanf ... Fri, 19 Feb 2016 22:47:12 GMT seroussi [20222] * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.py (modified) BUG: need to change the units of Floating and Grounded Bmb in python Fri, 19 Feb 2016 22:45:38 GMT seroussi [20221] * issm/trunk-jpl/test/NightlyRun/test408.py (modified) BUG: trying to fix python Fri, 19 Feb 2016 22:15:28 GMT Mathieu Morlighem [20220] * issm/trunk-jpl/test/NightlyRun/test317.py (modified) * issm/trunk-jpl/test/NightlyRun/test408.py (modified) CHG: updating python tests Fri, 19 Feb 2016 21:36:29 GMT Mathieu Morlighem [20219] * issm/trunk-jpl/scripts/BinRead.py (modified) BUG: load ISSM tools after looking for PYTHONSTARTUP Fri, 19 Feb 2016 21:29:21 GMT Mathieu Morlighem [20218] * issm/trunk-jpl/test/NightlyRun/test3015.py (modified) CHG: changing number of cpus on python side Fri, 19 Feb 2016 18:59:02 GMT seroussi [20217] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) BUG: SubElementMigration2 was not activated for HO Fri, 19 Feb 2016 18:44:20 GMT Mathieu Morlighem [20216] * issm/trunk-jpl/test/NightlyRun/test3015.py (modified) CHG: reverting python test Fri, 19 Feb 2016 18:25:41 GMT seroussi [20215] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/gauss/GaussPenta.cpp (modified) * issm/trunk-jpl/test/Archives/Archive408.nc (modified) * issm/trunk-jpl/test/NightlyRun/test208.py (modified) * issm/trunk-jpl/test/NightlyRun/test317.m (modified) * issm/trunk-jpl/test/NightlyRun/test317.py (modified) * issm/trunk-jpl/test/NightlyRun/test408.m (modified) * issm/trunk-jpl/test/NightlyRun/test408.py (modified) * issm/trunk-jpl/test/NightlyRun/test433.m (modified) NEW: finished implementing basal melt computation