# # ChangeLog for / # # Generated by Trac 1.4.3 # 04/30/25 04:20:29 Mon, 19 Oct 2015 21:05:00 GMT Eric.Larour [19658] * issm/trunk-jpl/test/NightlyRun/test218.m (modified) * issm/trunk-jpl/test/NightlyRun/test234.m (modified) * issm/trunk-jpl/test/NightlyRun/test235.m (modified) * issm/trunk-jpl/test/NightlyRun/test412.m (modified) * issm/trunk-jpl/test/NightlyRun/test413.m (modified) * issm/trunk-jpl/test/NightlyRun/test414.m (modified) * issm/trunk-jpl/test/NightlyRun/test417.m (modified) * issm/trunk-jpl/test/NightlyRun/test420.m (modified) CHG: starting transition to nightly runs for Dakota version 6.0 Mon, 19 Oct 2015 19:57:03 GMT Eric.Larour [19657] * issm/trunk-jpl/src/m/qmu/dakota_out_parse.m (modified) CHG: methodName may not be found in version Dakota 6+, so ignore. Mon, 19 Oct 2015 19:56:37 GMT Eric.Larour [19656] * issm/trunk-jpl/src/m/qmu/dakota_in_write.m (modified) CHG: branch on dakota version to write the params section. Mon, 19 Oct 2015 19:55:35 GMT Eric.Larour [19655] * issm/trunk-jpl/src/m/qmu/postqmu.m (modified) CHG: this check was not necessary and can be legit (i.e no error file) Mon, 19 Oct 2015 19:55:06 GMT Eric.Larour [19654] * issm/trunk-jpl/src/m/qmu/dakota_in_params.m (modified) CHG: adding evaluation_scheduling and processors_per_evaluation ... Mon, 19 Oct 2015 19:54:11 GMT Eric.Larour [19653] * issm/trunk-jpl/src/c/main/issm_dakota.cpp (modified) CHG: hooking up the Dakota ISSM Parallel Driver. Mon, 19 Oct 2015 19:53:22 GMT Eric.Larour [19652] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.cpp (added) * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.h (modified) CHG: switching a lot of the header file code into cpp file to avoid ... Mon, 19 Oct 2015 19:52:04 GMT Eric.Larour [19651] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: reverting back to previous configuration. Mon, 19 Oct 2015 19:50:51 GMT Eric.Larour [19650] * issm/trunk-jpl/src/m/classes/qmu.m (modified) CHG: added many checks for values of params options, which are the ... Mon, 19 Oct 2015 19:49:54 GMT Eric.Larour [19649] * issm/trunk-jpl/src/m/classes/clusters/generic.m (modified) CHG: allow generic cluter to run dakota in parallel for versions >= 6 Fri, 16 Oct 2015 02:58:26 GMT seroussi [19648] * issm/trunk-jpl/test/NightlyRun/test211.m (modified) * issm/trunk-jpl/test/NightlyRun/test431.m (modified) * issm/trunk-jpl/test/NightlyRun/test431.py (modified) * issm/trunk-jpl/test/NightlyRun/test701.m (modified) CHG: updated tolerances Thu, 15 Oct 2015 22:59:49 GMT Eric.Larour [19647] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: finalize Petsc when calling the descructor. Thu, 15 Oct 2015 22:18:48 GMT seroussi [19646] * issm/trunk-jpl/test/Archives/Archive209.nc (modified) * issm/trunk-jpl/test/Archives/Archive214.nc (modified) * issm/trunk-jpl/test/Archives/Archive431.nc (modified) CHG: three archives still having problems Thu, 15 Oct 2015 22:18:14 GMT Eric.Larour [19645] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: avoid mpi being redefined in version 5.3 of dakota. Thu, 15 Oct 2015 20:22:35 GMT Mathieu Morlighem [19644] * issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified) * issm/trunk-jpl/src/c/bamg/VertexOnGeom.cpp (modified) CHG: cleaning up unneeded code Thu, 15 Oct 2015 19:58:40 GMT schlegel [19643] * issm/trunk-jpl/src/m/classes/SMB.m (deleted) * issm/trunk-jpl/src/m/classes/SMB.py (deleted) * issm/trunk-jpl/src/m/classes/oldclasses/SMB.m (added) CHG: move SMB to old classes Thu, 15 Oct 2015 19:18:53 GMT schlegel [19642] * issm/trunk-jpl/src/m/classes/SMBforcing.m (modified) * issm/trunk-jpl/src/m/classes/clusters/lonestar.m (modified) * issm/trunk-jpl/src/m/classes/model.m (modified) CHG: update lonestar time plus SMBforcing conversions Thu, 15 Oct 2015 18:42:58 GMT seroussi [19641] * issm/trunk-jpl/test/Archives/Archive108.nc (modified) * issm/trunk-jpl/test/Archives/Archive109.nc (modified) * issm/trunk-jpl/test/Archives/Archive111.nc (modified) * issm/trunk-jpl/test/Archives/Archive120.nc (modified) * issm/trunk-jpl/test/Archives/Archive121.nc (modified) * issm/trunk-jpl/test/Archives/Archive122.nc (modified) * issm/trunk-jpl/test/Archives/Archive124.nc (modified) * issm/trunk-jpl/test/Archives/Archive206.nc (modified) * issm/trunk-jpl/test/Archives/Archive207.nc (modified) * issm/trunk-jpl/test/Archives/Archive210.nc (modified) * issm/trunk-jpl/test/Archives/Archive211.nc (modified) * issm/trunk-jpl/test/Archives/Archive224.nc (modified) * issm/trunk-jpl/test/Archives/Archive225.nc (modified) * issm/trunk-jpl/test/Archives/Archive227.nc (modified) * issm/trunk-jpl/test/Archives/Archive232.nc (modified) * issm/trunk-jpl/test/Archives/Archive233.nc (modified) * issm/trunk-jpl/test/Archives/Archive237.nc (modified) * issm/trunk-jpl/test/Archives/Archive312.nc (modified) * issm/trunk-jpl/test/Archives/Archive313.nc (modified) * issm/trunk-jpl/test/Archives/Archive315.nc (modified) * issm/trunk-jpl/test/Archives/Archive316.nc (modified) * issm/trunk-jpl/test/Archives/Archive317.nc (modified) * issm/trunk-jpl/test/Archives/Archive318.nc (modified) * issm/trunk-jpl/test/Archives/Archive324.nc (modified) * issm/trunk-jpl/test/Archives/Archive325.nc (modified) * issm/trunk-jpl/test/Archives/Archive326.nc (modified) * issm/trunk-jpl/test/Archives/Archive327.nc (modified) * issm/trunk-jpl/test/Archives/Archive329.nc (modified) * issm/trunk-jpl/test/Archives/Archive406.nc (modified) * issm/trunk-jpl/test/Archives/Archive407.nc (modified) * issm/trunk-jpl/test/Archives/Archive409.nc (modified) * issm/trunk-jpl/test/Archives/Archive410.nc (modified) * issm/trunk-jpl/test/Archives/Archive411.nc (modified) * issm/trunk-jpl/test/Archives/Archive415.nc (modified) * issm/trunk-jpl/test/Archives/Archive416.nc (modified) * issm/trunk-jpl/test/Archives/Archive426.nc (modified) * issm/trunk-jpl/test/Archives/Archive427.nc (modified) * issm/trunk-jpl/test/Archives/Archive431.nc (modified) * issm/trunk-jpl/test/Archives/Archive432.nc (modified) * issm/trunk-jpl/test/Archives/Archive436.nc (modified) * issm/trunk-jpl/test/Archives/Archive437.nc (modified) * issm/trunk-jpl/test/Archives/Archive439.nc (modified) * issm/trunk-jpl/test/Archives/Archive505.nc (modified) * issm/trunk-jpl/test/Archives/Archive506.nc (modified) * issm/trunk-jpl/test/Archives/Archive507.nc (modified) * issm/trunk-jpl/test/Archives/Archive508.nc (modified) * issm/trunk-jpl/test/Archives/Archive509.nc (modified) * issm/trunk-jpl/test/Archives/Archive510.nc (modified) * issm/trunk-jpl/test/Archives/Archive513.nc (modified) * issm/trunk-jpl/test/Archives/Archive515.nc (modified) * issm/trunk-jpl/test/Archives/Archive516.nc (modified) * issm/trunk-jpl/test/Archives/Archive802.nc (modified) * issm/trunk-jpl/test/Archives/Archive803.nc (modified) * issm/trunk-jpl/test/Archives/Archive805.nc (modified) CHG: updated archivesfor improved thermal Thu, 15 Oct 2015 15:32:01 GMT Mathieu Morlighem [19640] * issm/trunk-jpl/src/m/classes/clusters/generic.m (modified) BUG: Eric forgot to change generic.m Thu, 15 Oct 2015 15:24:58 GMT Mathieu Morlighem [19639] * issm/trunk-jpl/src/m/dev/devpath.m (modified) * issm/trunk-jpl/src/m/dev/devpath.py (modified) BUG: removed path specific to Eric's build Wed, 14 Oct 2015 21:46:47 GMT Eric.Larour [19638] * issm/trunk-jpl/src/m/classes/clusters/acenet.m (modified) * issm/trunk-jpl/src/m/classes/clusters/castor.m (modified) * issm/trunk-jpl/src/m/classes/clusters/cloud.m (modified) * issm/trunk-jpl/src/m/classes/clusters/cosmos.m (modified) * issm/trunk-jpl/src/m/classes/clusters/discover.m (modified) * issm/trunk-jpl/src/m/classes/clusters/gemini.m (modified) * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) * issm/trunk-jpl/src/m/classes/clusters/generic_static.m (modified) * issm/trunk-jpl/src/m/classes/clusters/greenplanet.m (modified) * issm/trunk-jpl/src/m/classes/clusters/hpc.m (modified) * issm/trunk-jpl/src/m/classes/clusters/lonestar.m (modified) * issm/trunk-jpl/src/m/classes/clusters/pfe.m (modified) * issm/trunk-jpl/src/m/classes/clusters/pfe.py (modified) * issm/trunk-jpl/src/m/classes/clusters/pollux.m (modified) * issm/trunk-jpl/src/m/dev/devpath.m (modified) * issm/trunk-jpl/src/m/solve/solve.m (modified) * issm/trunk-jpl/src/m/solve/solve.py (modified) CHG: need to introduce the isdakota parameter in the ... Wed, 14 Oct 2015 21:36:29 GMT seroussi [19637] * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ThermalAnalysis.cpp (modified) BUG: increased number of gauss points for thermal and enthalpy Wed, 14 Oct 2015 21:16:56 GMT Eric.Larour [19636] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: better fix for ISSM_DAKOTA conditional. Wed, 14 Oct 2015 20:45:03 GMT Mathieu Morlighem [19635] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: fixing ISSM_DAKOTA pb Wed, 14 Oct 2015 19:20:38 GMT Eric.Larour [19634] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/classes/Dakota/IssmDirectApplicInterface.h (modified) * issm/trunk-jpl/src/c/cores/dakota_core.cpp (modified) * issm/trunk-jpl/src/c/main/issm_dakota.cpp (modified) CHG: fixing issue with dakota <6. Tue, 13 Oct 2015 22:58:05 GMT Eric.Larour [19633] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: adapting for dakota 6.2 Tue, 13 Oct 2015 22:56:00 GMT Eric.Larour [19632] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/classes/Dakota (added) * issm/trunk-jpl/src/c/classes/Dakota/IssmDirectApplicInterface.h (added) * issm/trunk-jpl/src/c/classes/Dakota/IssmParallelDirectApplicInterface.h (added) * issm/trunk-jpl/src/c/classes/classes.h (modified) * issm/trunk-jpl/src/c/cores/DakotaSpawnCore.cpp (deleted) * issm/trunk-jpl/src/c/cores/DakotaSpawnCore.h (deleted) * issm/trunk-jpl/src/c/cores/dakota_core.cpp (modified) * issm/trunk-jpl/src/c/main/issm_dakota.cpp (added) CHG: committing temporary adaptation fixes for Dakota 6.2, and embryo ... Tue, 13 Oct 2015 22:54:25 GMT Eric.Larour [19631] * issm/trunk-jpl/src/c/datastructures/DataSet.cpp (modified) CHG: getting rid of simple warning from compilers. Tue, 13 Oct 2015 22:43:28 GMT Eric.Larour [19630] * issm/trunk-jpl/externalpackages/dakota/tests/test.in (modified) * issm/trunk-jpl/externalpackages/dakota/tests/test2.in (added) CHG: testing around. Tue, 13 Oct 2015 21:33:03 GMT schlegel [19629] * issm/trunk-jpl/examples/Greenland/CheatSheet.m (modified) CHG: need to update smb Tue, 13 Oct 2015 21:32:31 GMT schlegel [19628] * issm/trunk-jpl/examples/Greenland/Greenland.par (modified) * issm/trunk-jpl/examples/Greenland/runme.m (modified) CHG: need to update smb Mon, 12 Oct 2015 21:27:40 GMT schlegel [19627] * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/BuildDakotaCustom.cmake.mac.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/BuildDakotaCustom.cmake.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/BuildDakotaCustom.cmake.yosemite.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/CMakeLists.txt.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/CMakeLists.txt.pfe.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/DakotaDev.cmake.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/NonDLocalReliability.cpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/NonDSampling.cpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/ParallelLibrary.cpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/ParallelLibrary.hpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/6.2-mpi/pecos_global_defs.hpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/install-6.1-mpi-macosx64-yosemite.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-6.2-mpi-macosx64-yosemite.sh (added) CHG: new 6.2 build Fri, 09 Oct 2015 21:14:12 GMT Eric.Larour [19626] * issm/trunk-jpl/externalpackages/dakota/tests (added) * issm/trunk-jpl/externalpackages/dakota/tests/test.in (added) CHG: test dakota parallel capabilities. Thu, 08 Oct 2015 18:14:36 GMT seroussi [19625] * issm/trunk-jpl/src/m/classes/clusters/pfe.m (modified) fixed interactive mitgcm/issm coupling on pleiades Sat, 03 Oct 2015 00:47:47 GMT glperez [19624] * issm/trunk-jpl/externalpackages/petsc/install-dev-win10-par.sh (modified) CHG: Added a remove statement before checkout. Sat, 03 Oct 2015 00:44:59 GMT glperez [19623] * issm/trunk-jpl/jenkins/windows-par (modified) CHG: Fixed typo.. Sat, 03 Oct 2015 00:43:09 GMT glperez [19622] * issm/trunk-jpl/jenkins/windows-par (modified) CHG: Updated windows-par Jenkins configuration. Fri, 02 Oct 2015 23:03:25 GMT glperez [19621] * issm/trunk-jpl/jenkins/windows-par (modified) CHG: removed CCCL and CMake as external packages requirements. Fri, 02 Oct 2015 23:00:37 GMT glperez [19620] * issm/trunk-jpl/externalpackages/petsc/install-dev-win10-par.sh (added) ADD: new Petsc install script for dev branch in parallel. Fri, 02 Oct 2015 21:56:19 GMT glperez [19619] * issm/trunk-jpl/jenkins/windows-par (modified) CHG: Minor changes to Windows parallel build to update paths. Fri, 02 Oct 2015 20:53:50 GMT glperez [19618] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Changed options relating to Windows build. Particularly, for ... Thu, 01 Oct 2015 23:55:07 GMT seroussi [19617] * issm/trunk-jpl/src/m/classes/clusters/pfe.m (modified) working on interactive runs for mitgcm Thu, 01 Oct 2015 20:09:37 GMT glperez [19616] * issm/trunk-jpl/jenkins/jenkins.sh (modified) CHG: Changed OS checking in Jenkins script to use globbing. Thu, 01 Oct 2015 19:35:07 GMT glperez [19615] * issm/trunk-jpl/jenkins/jenkins.sh (modified) CHG: changed the way that Jenkins script determines if we are dealing ... Thu, 01 Oct 2015 18:27:56 GMT Eric.Larour [19614] * issm/trunk-jpl/test/NightlyRun/test243.m (modified) CHG: do not retreive swf Thu, 01 Oct 2015 17:45:44 GMT Eric.Larour [19613] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/Gembx.cpp (modified) CHG: applying patches for the AD mode to compile. Thu, 01 Oct 2015 06:46:25 GMT glperez [19612] * issm/trunk-jpl/examples/Greenland/runme.m (modified) * issm/trunk-jpl/jenkins/linux64_caladan (modified) CHG: Speed test. Thu, 01 Oct 2015 03:58:26 GMT Eric.Larour [19611] * issm/trunk-jpl/externalpackages/mercurial/install.sh (modified) CHG: added local make. Wed, 30 Sep 2015 23:28:47 GMT glperez [19610] * issm/trunk-jpl/jenkins/jenkins.sh (modified) * issm/trunk-jpl/jenkins/windows (modified) CHG: restored compilation to yes for Windows Jenkins. Wed, 30 Sep 2015 21:44:30 GMT glperez [19609] * issm/trunk-jpl/jenkins/jenkins.sh (modified) CHG: Added a sleep step before grabbing PID for Windows jenkins build. Wed, 30 Sep 2015 21:22:11 GMT glperez [19608] * issm/trunk-jpl/jenkins/jenkins.sh (modified) * issm/trunk-jpl/jenkins/windows (modified) CHG: Testing Jenkins on Windows. Wed, 30 Sep 2015 20:00:11 GMT seroussi [19607] * issm/trunk-jpl/src/m/classes/mask.m (modified) NEW: improved error message to figure out how many elements have all ... Wed, 30 Sep 2015 17:34:01 GMT glperez [19606] * issm/trunk-jpl/jenkins/jenkins.sh (modified) CHG: Added echo statements to test log outputs on Windows. Small ... Wed, 30 Sep 2015 15:31:13 GMT Mathieu Morlighem [19605] * issm/trunk/src/c/bamg/BamgQuadtree.h (modified) * issm/trunk/src/c/bamg/BamgVertex.h (modified) * issm/trunk/src/c/bamg/Mesh.cpp (modified) * issm/trunk/src/c/bamg/Triangle.h (modified) * issm/trunk/src/c/bamg/VertexOnGeom.cpp (modified) BUG: fixing bamg with new clang compilers on mac OSX Wed, 30 Sep 2015 06:40:03 GMT glperez [19604] * issm/trunk-jpl/jenkins/jenkins.sh (modified) CHG: Added contional to jenkins script for Windows matlab. Wed, 30 Sep 2015 05:53:31 GMT glperez [19603] * issm/trunk-jpl/externalpackages/windows/windows_environment.sh (modified) CHG: corrected a mistake. Wed, 30 Sep 2015 04:10:12 GMT glperez [19602] * issm/trunk-jpl/jenkins/jenkins.sh (modified) CHG: Changed order that scripts are sourced. Added an echo statement ... Wed, 30 Sep 2015 01:57:25 GMT glperez [19601] * issm/trunk-jpl/externalpackages/windows/windows_environment.sh (modified) CHG: Changed Windows environment variable to pickup SDK10.0 script ... Tue, 29 Sep 2015 09:00:45 GMT glperez [19600] * issm/trunk-jpl/jenkins/jenkins.sh (modified) CHG: Updated OS variable for Jenkins Windows build. Tue, 29 Sep 2015 06:43:15 GMT glperez [19599] * issm/trunk-jpl/jenkins/windows (modified) CHG: Udpated MPI directory when using Petsc dev branch. Tue, 29 Sep 2015 06:17:28 GMT glperez [19598] * issm/trunk-jpl/jenkins/windows (modified) CHG: Updated Matlab install directory. Tue, 29 Sep 2015 06:16:00 GMT glperez [19597] * issm/trunk-jpl/configs/config-win64.sh (modified) CHG: Updated Petsc MPI include directory for dev branch. Tue, 29 Sep 2015 05:09:05 GMT glperez [19596] * issm/trunk-jpl/jenkins/windows (modified) CHG: Updated Jenkins for Windows 10. Updated Petsc version to dev and ... Sun, 27 Sep 2015 16:49:24 GMT Mathieu Morlighem [19595] * issm/trunk-jpl/test/NightlyRun/runme.m (modified) * issm/trunk-jpl/test/NightlyRun/runme.py (modified) NEW: added check that result is not NaN Sat, 26 Sep 2015 01:41:17 GMT Eric.Larour [19594] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/SmbCondensationEnum.m (added) * issm/trunk-jpl/src/m/solve/parseresultsfromdisk.m (modified) CHG: fixed huge bug with reportina of SmbMassBalance and also added ... Fri, 25 Sep 2015 22:56:27 GMT glperez [19593] * issm/trunk-jpl/externalpackages/autotools/patches/libtool.m4.patch (modified) CHG: reverted a small change related to move from CCCL to CL. Fri, 25 Sep 2015 21:28:06 GMT schlegel [19592] * issm/trunk-jpl/src/m/classes/clusters/lonestar.m (modified) CHG: dictate less than 12 cpu per node Fri, 25 Sep 2015 21:09:21 GMT schlegel [19591] * issm/trunk-jpl/src/m/classes/clusters/lonestar.m (modified) CHG: update lonestar cluster class to add mkl Fri, 25 Sep 2015 19:24:41 GMT glperez [19590] * issm/trunk-jpl/externalpackages/autotools/patches/libtool.m4.patch (modified) CHG: Fixed a bug with the patch. Fri, 25 Sep 2015 19:10:02 GMT Eric.Larour [19589] * issm/trunk-jpl/test/Archives/Archive243.nc (added) * issm/trunk-jpl/test/Data/gemb_input.mat (added) * issm/trunk-jpl/test/NightlyRun/gemb.m (deleted) * issm/trunk-jpl/test/NightlyRun/test243.m (added) NEW: new SMBgemb nightly run test. Fri, 25 Sep 2015 18:43:29 GMT glperez [19588] * issm/trunk-jpl/externalpackages/autotools/install-win.sh (modified) * issm/trunk-jpl/externalpackages/autotools/patches/automake.patch (added) * issm/trunk-jpl/externalpackages/autotools/patches/libtool.m4.patch (modified) CHG: Applied new Automake patch for Windows build. ADD: Patch for ... Fri, 25 Sep 2015 16:17:40 GMT Eric.Larour [19587] * issm/trunk-jpl/src/m/classes/SMBgemb.m (modified) CHG: minor typos. Fri, 25 Sep 2015 16:17:20 GMT Eric.Larour [19586] * issm/trunk-jpl/src/m/plot/plotgemb.m (added) NEW: new plotting capability for SMB GEMB related patch plots. Fri, 25 Sep 2015 16:16:56 GMT Eric.Larour [19585] * issm/trunk-jpl/src/m/classes/clusters/generic.m (modified) CHG: setting no limit on valgrind error output. Fri, 25 Sep 2015 16:14:09 GMT Eric.Larour [19584] * issm/trunk-jpl/src/c/classes/Inputs/DoubleArrayInput.cpp (modified) CHG: fixed leak. Fri, 25 Sep 2015 16:12:29 GMT Eric.Larour [19583] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) CHG: finalized SMBgemb method and validated against Alex Gardner's model. Fri, 25 Sep 2015 16:08:47 GMT Eric.Larour [19582] * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/Gembx.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.h (modified) CHG: fixed the last remaining bugs. Big bug in the ER computation. ... Fri, 25 Sep 2015 04:03:27 GMT schlegel [19581] * issm/trunk-jpl/externalpackages/boost/configs/1.55/adl.hpp.lonestar.patch (added) * issm/trunk-jpl/externalpackages/boost/install-1.55-lonestar.sh (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/BuildDakotaCustom.cmake.lonestar.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/CMakeLists.txt.lonestar.patch (added) * issm/trunk-jpl/externalpackages/dakota/install-5.3.1-lonestar.sh (added) * issm/trunk-jpl/externalpackages/petsc/install-3.6-lonestar.sh (modified) NEW: dakota for lonestar Fri, 25 Sep 2015 01:18:28 GMT glperez [19580] * issm/trunk-jpl/externalpackages/autotools/install-win.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-dev-win10.sh (added) ADD: New Petsc install script for Windows using development branch. ... Fri, 25 Sep 2015 01:11:06 GMT glperez [19579] * issm/trunk-jpl/configure.ac (modified) * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: Removed cccl from configure.ac CHG: Added TRIANGLELIB for ... Fri, 25 Sep 2015 01:02:28 GMT glperez [19578] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: changed a great deal of flags for Windows build to change from ... Thu, 24 Sep 2015 00:05:53 GMT schlegel [19577] * issm/trunk-jpl/test/NightlyRun/test414.m (modified) * issm/trunk-jpl/test/NightlyRun/test417.m (modified) BUG: surface must be equal to base+thickness Wed, 23 Sep 2015 17:01:16 GMT Mathieu Morlighem [19576] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: lirc was not needed, it was a problem with matlab Tue, 22 Sep 2015 23:10:35 GMT Mathieu Morlighem [19575] * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: added MKLLIB to mex Tue, 22 Sep 2015 22:10:22 GMT Mathieu Morlighem [19574] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: added -lirc for missing symbol Mon, 21 Sep 2015 23:06:40 GMT schlegel [19573] * issm/trunk-jpl/src/m/classes/geometry.m (modified) * issm/trunk-jpl/src/m/classes/geometry.py (modified) BUG: need to add abs to geometry check Mon, 21 Sep 2015 22:51:45 GMT Eric.Larour [19572] * issm/trunk-jpl/src/c/shared/Matrix/MatrixUtils.cpp (modified) CHG: fixed serious bug in the splitting of cells Mon, 21 Sep 2015 20:50:48 GMT Mathieu Morlighem [19571] * issm/trunk-jpl/externalpackages/export_fig/LICENSE (modified) * issm/trunk-jpl/externalpackages/export_fig/README.md (modified) * issm/trunk-jpl/externalpackages/export_fig/append_pdfs.m (modified) * issm/trunk-jpl/externalpackages/export_fig/copyfig.m (modified) * issm/trunk-jpl/externalpackages/export_fig/crop_borders.m (modified) * issm/trunk-jpl/externalpackages/export_fig/eps2pdf.m (modified) * issm/trunk-jpl/externalpackages/export_fig/export_fig.m (modified) * issm/trunk-jpl/externalpackages/export_fig/fix_lines.m (modified) * issm/trunk-jpl/externalpackages/export_fig/ghostscript.m (modified) * issm/trunk-jpl/externalpackages/export_fig/isolate_axes.m (modified) * issm/trunk-jpl/externalpackages/export_fig/pdftops.m (modified) * issm/trunk-jpl/externalpackages/export_fig/print2array.m (modified) * issm/trunk-jpl/externalpackages/export_fig/print2eps.m (modified) * issm/trunk-jpl/externalpackages/export_fig/user_string.m (modified) * issm/trunk-jpl/externalpackages/export_fig/using_hg2.m (modified) CHG: new version of export_fig Mon, 21 Sep 2015 15:37:23 GMT cborstad [19570] * issm/trunk-jpl/src/m/classes/organizer.py (modified) CHG: analogous change for loading models saved with a name other than ... Mon, 21 Sep 2015 15:27:03 GMT cborstad [19569] * issm/trunk-jpl/src/m/classes/organizer.py (modified) CHG: retain repository in pathname for saving models if a name is ... Sat, 19 Sep 2015 21:56:46 GMT Eric.Larour [19568] * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/SurfaceMassBalancex.h (modified) CHG: fixing the prototype. Sat, 19 Sep 2015 21:55:36 GMT Eric.Larour [19567] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) CHG: adding verbosity + fixing some serious bugs Sat, 19 Sep 2015 21:54:07 GMT Eric.Larour [19566] * issm/trunk-jpl/src/c/modules/SurfaceMassBalancex/Gembx.cpp (modified) CHG: added verbose of each module + fixed some serious bugs. Sat, 19 Sep 2015 21:52:27 GMT Eric.Larour [19565] * issm/trunk-jpl/src/c/analyses/SmbAnalysis.cpp (modified) CHG: adding initial scaling of density for the snow pack. Sat, 19 Sep 2015 21:51:57 GMT Eric.Larour [19564] * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) CHG: some verbose changes, essentially anouncing the time step. Sat, 19 Sep 2015 21:51:32 GMT Eric.Larour [19563] * issm/trunk-jpl/src/c/shared/Matrix/MatrixUtils.cpp (modified) * issm/trunk-jpl/src/c/shared/Matrix/matrix.h (modified) CHG: added vararg driven echo of a cell. Sat, 19 Sep 2015 21:51:10 GMT Eric.Larour [19562] * issm/trunk-jpl/src/c/shared/Numerics/Verbosity.cpp (modified) * issm/trunk-jpl/src/c/shared/Numerics/Verbosity.h (modified) CHG: added SMB verbosity level. Sat, 19 Sep 2015 21:50:48 GMT Eric.Larour [19561] * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/SmbInitDensityScalingEnum.m (added) * issm/trunk-jpl/src/m/enum/SmbSwfEnum.m (added) CHG: added SmbInitDensityScalingEnum and SmbSwfEnum enums. Sat, 19 Sep 2015 21:50:01 GMT Eric.Larour [19560] * issm/trunk-jpl/src/m/consistency/checkfield.m (modified) CHG: check consistency of time series now allows series that are size ... Sat, 19 Sep 2015 21:49:09 GMT Eric.Larour [19559] * issm/trunk-jpl/src/m/classes/SMBgemb.m (modified) * issm/trunk-jpl/src/m/classes/mask.m (modified) * issm/trunk-jpl/src/m/classes/verbose.m (modified) * issm/trunk-jpl/src/m/classes/verbose.py (modified) CHG: mask.m: allow only 1 element mesh. verbose :added smb flag. ...