# # ChangeLog for / # # Generated by Trac 1.4.3 # 05/04/25 22:48:26 Tue, 08 Apr 2014 15:23:36 GMT Mathieu Morlighem [17663] * issm/trunk-jpl/test/NightlyRun/test204.m (modified) * issm/trunk-jpl/test/NightlyRun/test204.py (modified) * issm/trunk-jpl/test/NightlyRun/test335.m (modified) * issm/trunk-jpl/test/NightlyRun/test419.m (modified) * issm/trunk-jpl/test/NightlyRun/test419.py (modified) * issm/trunk-jpl/test/NightlyRun/test427.m (modified) * issm/trunk-jpl/test/NightlyRun/test427.py (modified) * issm/trunk-jpl/test/NightlyRun/test435.m (modified) * issm/trunk-jpl/test/NightlyRun/test455.m (modified) * issm/trunk-jpl/test/NightlyRun/test455.py (modified) * issm/trunk-jpl/test/NightlyRun/test702.m (modified) * issm/trunk-jpl/test/NightlyRun/test804.m (modified) * issm/trunk-jpl/test/NightlyRun/test804.py (modified) CHG: relaxing some tolerances Mon, 07 Apr 2014 20:39:17 GMT Mathieu Morlighem [17662] * issm/trunk-jpl/src/c/toolkits/petsc/patches/NewVec.cpp (modified) CHG: no need to initialize vector with 0, this is done automatically Mon, 07 Apr 2014 20:31:43 GMT Mathieu Morlighem [17661] * issm/trunk-jpl/src/m/solvers/mumpsoptions.m (modified) CHG: make sure // matlab reordering is used Mon, 07 Apr 2014 20:14:53 GMT Mathieu Morlighem [17660] * issm/trunk-jpl/src/c/classes/IoModel.cpp (modified) CHG: reverting to initial version Mon, 07 Apr 2014 20:14:01 GMT Mathieu Morlighem [17659] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_la_theta.cpp (modified) * issm/trunk-jpl/src/m/classes/flowequation.m (modified) * issm/trunk-jpl/src/m/classes/flowequation.py (modified) NEW: added r and theta as model parameters in md.flowequations Mon, 07 Apr 2014 19:06:29 GMT toanqngu [17658] * issm/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ISSM.java (modified) * issm/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ISSMWebActivity.java (modified) Modify re-routing implementation on offline mode Mon, 07 Apr 2014 02:09:13 GMT cborstad [17657] * issm/trunk-jpl/src/m/plot/plot_overlay.py (modified) BUG: ensure result of max is a float Mon, 07 Apr 2014 01:47:50 GMT cborstad [17656] * issm/trunk-jpl/src/m/plot/plot_overlay.py (modified) CHG: check whether geotiff is a 3-band rgb raster; if so, convert to ... Sun, 06 Apr 2014 21:48:52 GMT cborstad [17655] * issm/trunk-jpl/src/m/interp/interp.py (modified) added option to plot data for inspecting holes before spline ... Sat, 05 Apr 2014 02:47:11 GMT cborstad [17654] * issm/trunk-jpl/src/m/plot/plot_manager.py (modified) * issm/trunk-jpl/src/m/plot/plot_overlay.py (added) * issm/trunk-jpl/src/m/plot/plot_unit.py (modified) NEW: overlay plotting capability in python Fri, 04 Apr 2014 23:24:47 GMT Mathieu Morlighem [17653] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.h (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_la_theta.cpp (modified) CHG: separating update tau and d Fri, 04 Apr 2014 23:07:14 GMT seroussi [17652] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/shared/FSanalyticals/fsanalyticals.cpp (modified) * issm/trunk-jpl/src/c/shared/FSanalyticals/fsanalyticals.h (modified) NEW: added friction fonction to test analytical solutions Fri, 04 Apr 2014 22:50:05 GMT Mathieu Morlighem [17651] * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/AugmentedLagrangianThetaEnum.m (added) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) NEW: added new enum Fri, 04 Apr 2014 22:40:43 GMT Mathieu Morlighem [17650] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/shared/Numerics/NewtonSolveDnorm.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_la_theta.cpp (modified) NEW: done with X-TH LA Fri, 04 Apr 2014 22:35:32 GMT cborstad [17649] * issm/trunk-jpl/src/m/plot/colormaps/cmaptools.py (added) NEW: module for modifying matplotlib colormaps, for now just contains ... Fri, 04 Apr 2014 21:38:48 GMT cborstad [17648] * issm/trunk-jpl/src/m/coordsystems/xy2ll.py (modified) minor bug in xy2ll if statement Fri, 04 Apr 2014 18:31:12 GMT Mathieu Morlighem [17647] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) BUG: tau must be stored in Dev Stress Fri, 04 Apr 2014 14:59:05 GMT Mathieu Morlighem [17646] * issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.cpp (modified) CHG: only load Vz in 3d models Fri, 04 Apr 2014 05:08:05 GMT cborstad [17645] * issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.cpp (modified) CHG: forgot to remove print statement from debugging Fri, 04 Apr 2014 05:07:05 GMT cborstad [17644] * issm/trunk-jpl/src/m/classes/damage.m (modified) * issm/trunk-jpl/src/m/classes/transient.m (modified) BUG: fixed a couple bugs in matlab code for damage evolution analysis ... Fri, 04 Apr 2014 00:56:16 GMT cborstad [17643] * issm/trunk-jpl/src/m/plot/plot_unit.py (modified) CHG: minor, index for colorbar saturation not needed here Fri, 04 Apr 2014 00:48:36 GMT cborstad [17642] * issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.cpp (modified) * issm/trunk-jpl/src/c/cores/AnalysisConfiguration.cpp (modified) * issm/trunk-jpl/src/c/cores/transient_core.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/ModelProcessorx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/transient.py (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/TransientIsdamageEnum.m (deleted) * issm/trunk-jpl/src/m/enum/TransientIsdamageevolutionEnum.m (added) * issm/trunk-jpl/src/m/interp/averaging.py (modified) CHG: added damage evolution analysis to transient run Fri, 04 Apr 2014 00:30:29 GMT Mathieu Morlighem [17641] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/modules/GroundinglineMigrationx/GroundinglineMigrationx.cpp (modified) CHG: added GL Migration in 3d, testing required Fri, 04 Apr 2014 00:22:08 GMT cborstad [17640] * issm/trunk-jpl/src/m/plot/applyoptions.py (modified) * issm/trunk-jpl/src/m/plot/plot_unit.py (modified) CHG: better handling of colormap and clim, added options to specify ... Fri, 04 Apr 2014 00:21:08 GMT Mathieu Morlighem [17639] * issm/trunk-jpl/test/Archives/Archive702.nc (modified) * issm/trunk-jpl/test/Archives/Archive703.nc (modified) CHG: saved archive now that vz Dirichlet is applied at the GL Thu, 03 Apr 2014 23:24:17 GMT hongjuy [17638] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: using max instead of min of Groundedicelevelset to test if ... Thu, 03 Apr 2014 23:22:00 GMT Mathieu Morlighem [17637] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) CHG: constrain vz on FS if levelset = 0 Thu, 03 Apr 2014 23:00:44 GMT hongjuy [17636] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: (1) add constraint on vy if levelset == 0 (2) GL migration only ... Thu, 03 Apr 2014 21:57:10 GMT cborstad [17635] * issm/trunk-jpl/src/m/plot/applyoptions.py (modified) * issm/trunk-jpl/src/m/plot/plot_unit.py (modified) CHG: better default handling of colormap in python plots Thu, 03 Apr 2014 20:54:38 GMT hongjuy [17634] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: minor, no need to declare basis variable Thu, 03 Apr 2014 20:51:57 GMT hongjuy [17633] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) NEW: first version of contact GL criterion Thu, 03 Apr 2014 19:11:13 GMT cborstad [17632] * issm/trunk-jpl/src/m/classes/damage.py (modified) BUG: fixed indent error in output marshalling for damage Thu, 03 Apr 2014 15:42:11 GMT Mathieu Morlighem [17631] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: fixed problem with matlab mex extension when matlab is installed ... Thu, 03 Apr 2014 14:24:30 GMT Mathieu Morlighem [17630] * issm/trunk-jpl/test/NightlyRun/test211.m (modified) * issm/trunk-jpl/test/NightlyRun/test211.py (modified) CHG: relaxing some tolerances Wed, 02 Apr 2014 23:46:22 GMT Mathieu Morlighem [17629] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/shared/Numerics/NewtonSolveDnorm.cpp (modified) * issm/trunk-jpl/src/c/shared/Numerics/numerics.h (modified) CHG: fixing Newton algo with first guess Wed, 02 Apr 2014 23:11:41 GMT Mathieu Morlighem [17628] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) CHG: fixing Dstar Wed, 02 Apr 2014 22:36:30 GMT Mathieu Morlighem [17627] * issm/trunk-jpl/src/c/classes/IoModel.cpp (modified) * issm/trunk-jpl/src/c/toolkits/mpi/issmmpi.h (modified) CHG: working on templating MPI calls Wed, 02 Apr 2014 20:20:50 GMT Mathieu Morlighem [17626] * issm/trunk-jpl/src/c/analyses/LevelsetAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/LevelsetAnalysis.h (modified) CHG: trying to make _DEVELOPMENT_ variable defined Wed, 02 Apr 2014 15:25:32 GMT seroussi [17625] * issm/trunk-jpl/test/Archives/Archive702.nc (modified) * issm/trunk-jpl/test/Archives/Archive703.nc (modified) CHG: updated flow line archives Wed, 02 Apr 2014 03:09:03 GMT cborstad [17624] * issm/trunk-jpl/src/m/mech/damagefrominversion.py (modified) BUG: fixed problem for vector vs. array in damage calcs Wed, 02 Apr 2014 03:05:39 GMT seroussi [17623] * issm/trunk-jpl/src/c/classes/Elements/SegRef.cpp (modified) BUG: use only x to compute Jacobian (1d model do not use 3d coordinates) Tue, 01 Apr 2014 23:47:34 GMT cborstad [17622] * issm/trunk-jpl/src/m/mech/analyticaldamage.py (modified) * issm/trunk-jpl/src/m/mech/backstressfrominversion.py (added) * issm/trunk-jpl/src/m/mech/damagefrominversion.py (added) * issm/trunk-jpl/src/m/mech/mechanicalproperties.py (modified) * issm/trunk-jpl/src/m/mech/thomasparams.py (added) python-izing some mech functions Tue, 01 Apr 2014 20:43:51 GMT Mathieu Morlighem [17621] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) CHG: fixing some memory leaks Tue, 01 Apr 2014 20:37:08 GMT toanqngu [17620] * issm/mobile/android/ISSM_APP/AndroidManifest.xml (modified) * issm/mobile/android/ISSM_APP/bin/AndroidManifest.xml (modified) * issm/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ISSMAPP.java (modified) * issm/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ISSMWebActivity.java (modified) * issm/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/MyWebViewClient.java (modified) Updates to include online and offline web app mode Tue, 01 Apr 2014 20:28:22 GMT Mathieu Morlighem [17619] * issm/trunk-jpl/src/c/classes/Materials/Matice.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_la_theta.cpp (modified) CHG: added initial guess when u=0 and number of non linear iterations ... Tue, 01 Apr 2014 17:40:39 GMT cborstad [17618] * issm/trunk-jpl/src/m/plot/processdata.py (modified) better default fill value for nan's Tue, 01 Apr 2014 17:37:26 GMT cborstad [17617] * issm/trunk-jpl/src/m/plot/plotmodel.py (modified) * issm/trunk-jpl/src/m/plot/processdata.py (modified) CHG: fill nan's by default since matplotlib doesn't handle them Tue, 01 Apr 2014 17:21:07 GMT Mathieu Morlighem [17616] * issm/trunk-jpl/test/Archives/Archive701.nc (modified) * issm/trunk-jpl/test/Archives/Archive702.nc (modified) * issm/trunk-jpl/test/Archives/Archive703.nc (modified) CHG: updating FS archives: now keep vx and vy on actual interpolation ... Tue, 01 Apr 2014 16:03:21 GMT Mathieu Morlighem [17615] * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) CHG: added 1/sqrt(2) factor in effective straine rate for flow band ... Tue, 01 Apr 2014 15:51:57 GMT cborstad [17614] * issm/trunk-jpl/src/m/exp/expread.py (modified) corrected help text for python usage Tue, 01 Apr 2014 14:52:15 GMT Mathieu Morlighem [17613] * issm/trunk-jpl/test/Archives/Archive280.nc (modified) * issm/trunk-jpl/test/Archives/Archive285.nc (modified) * issm/trunk-jpl/test/Archives/Archive450.nc (modified) * issm/trunk-jpl/test/Archives/Archive455.nc (modified) CHG: updating archives now that we do not reinterpolate results on P1 Tue, 01 Apr 2014 05:49:47 GMT cborstad [17612] * issm/trunk-jpl/src/m/shp/shp2exp.py (modified) BUG: fixed shp2exp for point shapefiles Mon, 31 Mar 2014 23:44:26 GMT Mathieu Morlighem [17611] * issm/trunk-jpl/src/m/classes/oldclasses/mesh.m (modified) CHG: do not update old class Mon, 31 Mar 2014 23:43:09 GMT Mathieu Morlighem [17610] * issm/trunk-jpl/src/c/analyses/BalancethicknessAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/BalancevelocityAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/DepthAverageAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ExtrapolationAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ExtrudeFromBaseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ExtrudeFromTopAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/FreeSurfaceBaseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/FreeSurfaceTopAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCEfficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCInefficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyShreveAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/L2ProjectionBaseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/L2ProjectionEPLAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/LevelsetAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/LsfReinitializationAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/MeltingAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmoothedSurfaceSlopeXAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmoothedSurfaceSlopeYAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceSIAAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceVerticalAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ThermalAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Node.cpp (modified) * issm/trunk-jpl/src/c/modules/SetActiveNodesLSMx/SetActiveNodesLSMx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/classes/mesh2dvertical.m (modified) * issm/trunk-jpl/src/m/classes/mesh3dprisms.m (modified) * issm/trunk-jpl/src/m/classes/mesh3dprisms.py (modified) * issm/trunk-jpl/src/m/classes/mesh3dtetras.m (modified) * issm/trunk-jpl/src/m/classes/model.m (modified) * issm/trunk-jpl/src/m/classes/model.py (modified) * issm/trunk-jpl/src/m/classes/oldclasses/mesh.m (modified) * issm/trunk-jpl/src/m/classes/stressbalance.m (modified) * issm/trunk-jpl/src/m/classes/stressbalance.py (modified) * issm/trunk-jpl/src/m/consistency/checkfield.m (modified) * issm/trunk-jpl/src/m/consistency/checkfield.py (modified) * issm/trunk-jpl/src/m/contrib/bamg/yams.m (modified) * issm/trunk-jpl/src/m/contrib/dassflow/importgmsh.m (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/MeshElementonbaseEnum.m (added) * issm/trunk-jpl/src/m/enum/MeshElementonbedEnum.m (deleted) * issm/trunk-jpl/src/m/enum/MeshVertexonbaseEnum.m (added) * issm/trunk-jpl/src/m/enum/MeshVertexonbedEnum.m (deleted) * issm/trunk-jpl/src/m/mesh/bamgflowband.m (modified) * issm/trunk-jpl/test/NightlyRun/test1101.m (modified) * issm/trunk-jpl/test/NightlyRun/test1101.py (modified) * issm/trunk-jpl/test/NightlyRun/test1102.m (modified) * issm/trunk-jpl/test/NightlyRun/test1102.py (modified) * issm/trunk-jpl/test/NightlyRun/test1103.m (modified) * issm/trunk-jpl/test/NightlyRun/test1103.py (modified) * issm/trunk-jpl/test/NightlyRun/test1104.m (modified) * issm/trunk-jpl/test/NightlyRun/test1104.py (modified) * issm/trunk-jpl/test/NightlyRun/test1105.m (modified) * issm/trunk-jpl/test/NightlyRun/test1105.py (modified) * issm/trunk-jpl/test/NightlyRun/test1107.m (modified) * issm/trunk-jpl/test/NightlyRun/test1107.py (modified) * issm/trunk-jpl/test/NightlyRun/test1108.m (modified) * issm/trunk-jpl/test/NightlyRun/test1108.py (modified) * issm/trunk-jpl/test/NightlyRun/test1109.m (modified) * issm/trunk-jpl/test/NightlyRun/test1110.m (modified) * issm/trunk-jpl/test/NightlyRun/test1205.m (modified) * issm/trunk-jpl/test/NightlyRun/test1205.py (modified) * issm/trunk-jpl/test/NightlyRun/test1206.m (modified) * issm/trunk-jpl/test/NightlyRun/test1206.py (modified) * issm/trunk-jpl/test/NightlyRun/test1207.m (modified) * issm/trunk-jpl/test/NightlyRun/test1207.py (modified) * issm/trunk-jpl/test/NightlyRun/test1208.m (modified) * issm/trunk-jpl/test/NightlyRun/test1208.py (modified) * issm/trunk-jpl/test/NightlyRun/test1302.m (modified) * issm/trunk-jpl/test/NightlyRun/test1302.py (modified) * issm/trunk-jpl/test/NightlyRun/test1303.m (modified) * issm/trunk-jpl/test/NightlyRun/test1303.py (modified) * issm/trunk-jpl/test/NightlyRun/test703.m (modified) NEW: renamed onbed -> onbase Mon, 31 Mar 2014 23:33:33 GMT Mathieu Morlighem [17609] * issm/trunk-jpl/src/c/analyses/AdjointHorizAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCEfficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyShreveAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceVerticalAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ThermalAnalysis.cpp (modified) CHG: InputUpdateFromSolution do not assume a P1 finite element anymore Mon, 31 Mar 2014 23:02:42 GMT Mathieu Morlighem [17608] * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) BUG: fixed some memory leaks/delete problems Mon, 31 Mar 2014 22:14:58 GMT Mathieu Morlighem [17607] * issm/trunk-jpl/test/Archives/Archive124.nc (modified) * issm/trunk-jpl/test/Archives/Archive211.nc (modified) * issm/trunk-jpl/test/Archives/Archive701.nc (modified) * issm/trunk-jpl/test/Archives/Archive702.nc (modified) * issm/trunk-jpl/test/Archives/Archive703.nc (modified) CHG: updating archives now that FS does not reinterpolate to P1 Mon, 31 Mar 2014 21:41:44 GMT Mathieu Morlighem [17606] * issm/trunk-jpl/test/Archives/Archive104.nc (modified) * issm/trunk-jpl/test/Archives/Archive204.nc (modified) * issm/trunk-jpl/test/Archives/Archive211.nc (modified) * issm/trunk-jpl/test/Archives/Archive215.nc (modified) * issm/trunk-jpl/test/Archives/Archive220.nc (modified) * issm/trunk-jpl/test/Archives/Archive221.nc (modified) * issm/trunk-jpl/test/Archives/Archive290.nc (modified) * issm/trunk-jpl/test/Archives/Archive308.nc (modified) * issm/trunk-jpl/test/Archives/Archive322.nc (modified) * issm/trunk-jpl/test/Archives/Archive404.nc (modified) * issm/trunk-jpl/test/Archives/Archive421.nc (modified) * issm/trunk-jpl/test/Archives/Archive422.nc (modified) * issm/trunk-jpl/test/Archives/Archive503.nc (modified) * issm/trunk-jpl/test/Archives/Archive507.nc (modified) * issm/trunk-jpl/test/Archives/Archive510.nc (modified) * issm/trunk-jpl/test/Archives/Archive511.nc (modified) CHG: updating FS archives: now keep vx and vy on actual interpolation ... Mon, 31 Mar 2014 21:41:15 GMT Mathieu Morlighem [17605] * issm/trunk-jpl/src/c/classes/Inputs/PentaInput.cpp (modified) CHG: fixing depth averaging for non P1 input Mon, 31 Mar 2014 20:36:06 GMT Mathieu Morlighem [17604] * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) CHG: for FS, do not reinterpolate results on P1 inputs, keep the same ... Mon, 31 Mar 2014 20:33:46 GMT Mathieu Morlighem [17603] * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_la_theta.cpp (modified) NEW: added convergence test for LA Theta algorithm Mon, 31 Mar 2014 16:24:22 GMT Mathieu Morlighem [17602] * issm/trunk-jpl/src/m/parameterization/contourenvelope.py (modified) BUG: do not use mesh variable Sat, 29 Mar 2014 03:07:44 GMT Mathieu Morlighem [17601] * issm/trunk-jpl/test/NightlyRun/test237.py (modified) BUG: fixed initial temperatures Fri, 28 Mar 2014 23:09:25 GMT Mathieu Morlighem [17600] * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ExtrapolationAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/FreeSurfaceBaseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/LsfReinitializationAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceSIAAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceVerticalAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Constraints/SpcDynamic.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Node.cpp (modified) * issm/trunk-jpl/src/c/modules/IoModelToConstraintsx/IoModelToConstraintsx.h (modified) NEW: relaxed constrain for free surface bed when floating, and ... Fri, 28 Mar 2014 22:35:45 GMT Mathieu Morlighem [17599] * issm/trunk-jpl/test/NightlyRun/test426.m (modified) CHG: fixed bathymetry Fri, 28 Mar 2014 19:18:11 GMT cborstad [17598] * issm/trunk-jpl/src/m/interp/interp.py (modified) CHG: subset the input data for better efficiency, mask out nan's ... Fri, 28 Mar 2014 19:15:43 GMT cborstad [17597] * issm/trunk-jpl/src/m/plot/processdata.m (modified) * issm/trunk-jpl/src/m/plot/processdata.py (modified) * issm/trunk-jpl/src/m/plot/processmesh.py (modified) BUG: some fixes for new mesh handling Fri, 28 Mar 2014 18:08:21 GMT cborstad [17596] * issm/trunk-jpl/src/m/interp/interp.py (added) NEW: python interpolation module. Largely analogous to existing ... Fri, 28 Mar 2014 17:27:43 GMT Mathieu Morlighem [17595] * issm/trunk-jpl/test/NightlyRun/test426.py (modified) CHG: minor Fri, 28 Mar 2014 17:18:01 GMT Mathieu Morlighem [17594] * issm/trunk-jpl/test/Par/RoundSheetShelf.py (modified) * issm/trunk-jpl/test/Par/ValleyGlacierShelf.py (modified) BUG: fixed bathymetry: Fri, 28 Mar 2014 17:17:27 GMT Mathieu Morlighem [17593] * issm/trunk-jpl/src/m/classes/groundingline.py (modified) BUG: fixed grounding line migration type Fri, 28 Mar 2014 16:59:01 GMT Mathieu Morlighem [17592] * issm/trunk-jpl/test/NightlyRun/test423.m (modified) * issm/trunk-jpl/test/NightlyRun/test423.py (modified) * issm/trunk-jpl/test/NightlyRun/test424.m (modified) * issm/trunk-jpl/test/NightlyRun/test424.py (modified) * issm/trunk-jpl/test/NightlyRun/test425.m (modified) * issm/trunk-jpl/test/NightlyRun/test425.py (modified) * issm/trunk-jpl/test/NightlyRun/test427.m (modified) * issm/trunk-jpl/test/NightlyRun/test427.py (modified) * issm/trunk-jpl/test/NightlyRun/test435.m (modified) CHG: fixed GL tests Fri, 28 Mar 2014 16:51:44 GMT Mathieu Morlighem [17591] * issm/trunk-jpl/src/m/solve/waitonlock.m (modified) BUG: fixed for pfe interactive=0 Fri, 28 Mar 2014 16:15:19 GMT Mathieu Morlighem [17590] * issm/trunk-jpl/src/m/classes/geometry.m (modified) * issm/trunk-jpl/src/m/classes/geometry.py (modified) * issm/trunk-jpl/src/m/classes/groundingline.m (modified) * issm/trunk-jpl/src/m/classes/groundingline.py (modified) * issm/trunk-jpl/src/m/classes/mesh3dprisms.m (modified) * issm/trunk-jpl/src/m/classes/mesh3dtetras.m (modified) * issm/trunk-jpl/src/m/classes/model.m (modified) * issm/trunk-jpl/src/m/classes/model.py (modified) * issm/trunk-jpl/src/m/contrib/hydrology/effectivepressure.m (modified) * issm/trunk-jpl/src/m/geometry/ThicknessCorrection.m (modified) * issm/trunk-jpl/src/m/interp/ProfileValues.m (modified) * issm/trunk-jpl/src/m/interp/SectionValues.m (modified) * issm/trunk-jpl/src/m/mech/basalstress.m (modified) * issm/trunk-jpl/src/m/plot/plot_basaldrag.m (modified) * issm/trunk-jpl/test/NightlyRun/test217.m (modified) * issm/trunk-jpl/test/NightlyRun/test217.py (modified) * issm/trunk-jpl/test/NightlyRun/test218.m (modified) * issm/trunk-jpl/test/NightlyRun/test223.m (modified) * issm/trunk-jpl/test/NightlyRun/test223.py (modified) * issm/trunk-jpl/test/NightlyRun/test225.m (modified) * issm/trunk-jpl/test/NightlyRun/test225.py (modified) * issm/trunk-jpl/test/NightlyRun/test3015.m (modified) * issm/trunk-jpl/test/NightlyRun/test3015.py (modified) * issm/trunk-jpl/test/NightlyRun/test3020.m (modified) * issm/trunk-jpl/test/NightlyRun/test3020.py (modified) * issm/trunk-jpl/test/NightlyRun/test423.m (modified) * issm/trunk-jpl/test/NightlyRun/test423.py (modified) * issm/trunk-jpl/test/NightlyRun/test424.m (modified) * issm/trunk-jpl/test/NightlyRun/test424.py (modified) * issm/trunk-jpl/test/NightlyRun/test425.m (modified) * issm/trunk-jpl/test/NightlyRun/test425.py (modified) * issm/trunk-jpl/test/NightlyRun/test426.m (modified) * issm/trunk-jpl/test/NightlyRun/test426.py (modified) * issm/trunk-jpl/test/NightlyRun/test427.m (modified) * issm/trunk-jpl/test/NightlyRun/test427.py (modified) * issm/trunk-jpl/test/NightlyRun/test435.m (modified) * issm/trunk-jpl/test/NightlyRun/test511.m (modified) * issm/trunk-jpl/test/NightlyRun/test511.py (modified) * issm/trunk-jpl/test/NightlyRun/test701.m (modified) * issm/trunk-jpl/test/NightlyRun/test702.m (modified) * issm/trunk-jpl/test/NightlyRun/test703.m (modified) * issm/trunk-jpl/test/Par/79North.par (modified) * issm/trunk-jpl/test/Par/79North.py (modified) * issm/trunk-jpl/test/Par/GiaBenchmarksAB.par (modified) * issm/trunk-jpl/test/Par/GiaBenchmarksCD.par (modified) * issm/trunk-jpl/test/Par/ISMIPA.par (modified) * issm/trunk-jpl/test/Par/ISMIPA.py (modified) * issm/trunk-jpl/test/Par/ISMIPB.par (modified) * issm/trunk-jpl/test/Par/ISMIPB.py (modified) * issm/trunk-jpl/test/Par/ISMIPC.par (modified) * issm/trunk-jpl/test/Par/ISMIPC.py (modified) * issm/trunk-jpl/test/Par/ISMIPD.par (modified) * issm/trunk-jpl/test/Par/ISMIPD.py (modified) * issm/trunk-jpl/test/Par/ISMIPE.par (modified) * issm/trunk-jpl/test/Par/ISMIPE.py (modified) * issm/trunk-jpl/test/Par/ISMIPF.par (modified) * issm/trunk-jpl/test/Par/ISMIPF.py (modified) * issm/trunk-jpl/test/Par/Pig.par (modified) * issm/trunk-jpl/test/Par/Pig.py (modified) * issm/trunk-jpl/test/Par/RoundSheetEISMINT.par (modified) * issm/trunk-jpl/test/Par/RoundSheetEISMINT.py (modified) * issm/trunk-jpl/test/Par/RoundSheetShelf.par (modified) * issm/trunk-jpl/test/Par/RoundSheetShelf.py (modified) * issm/trunk-jpl/test/Par/RoundSheetStaticEISMINT.par (modified) * issm/trunk-jpl/test/Par/RoundSheetStaticEISMINT.py (modified) * issm/trunk-jpl/test/Par/SquareEISMINT.par (modified) * issm/trunk-jpl/test/Par/SquareEISMINT.py (modified) * issm/trunk-jpl/test/Par/SquareSheetConstrained.par (modified) * issm/trunk-jpl/test/Par/SquareSheetConstrained.py (modified) * issm/trunk-jpl/test/Par/SquareSheetShelf.par (modified) * issm/trunk-jpl/test/Par/SquareSheetShelf.py (modified) * issm/trunk-jpl/test/Par/SquareShelf.par (modified) * issm/trunk-jpl/test/Par/SquareShelf.py (modified) * issm/trunk-jpl/test/Par/SquareShelf2.par (modified) * issm/trunk-jpl/test/Par/SquareShelf2.py (modified) * issm/trunk-jpl/test/Par/SquareShelfConstrained.par (modified) * issm/trunk-jpl/test/Par/SquareShelfConstrained.py (modified) * issm/trunk-jpl/test/Par/SquareThermal.par (modified) * issm/trunk-jpl/test/Par/SquareThermal.py (modified) * issm/trunk-jpl/test/Par/ValleyGlacierShelf.par (modified) * issm/trunk-jpl/test/Par/ValleyGlacierShelf.py (modified) CHG: WARNING: md.geometry.bed is now md.geometry.base and bathymetry ... Fri, 28 Mar 2014 15:55:14 GMT Mathieu Morlighem [17589] * issm/trunk-jpl/src/m/classes/mesh3dprisms.m (modified) BUG: fixed mesh3dprisms constructor Fri, 28 Mar 2014 15:09:08 GMT Mathieu Morlighem [17588] * issm/trunk-jpl/src/m/classes/model.py (modified) * issm/trunk-jpl/src/m/parameterization/contourenvelope.py (modified) BUG: class mesh does not exist anymore Fri, 28 Mar 2014 02:21:33 GMT cborstad [17587] * issm/trunk-jpl/src/m/coordsystems/ll2xy.py (added) NEW: python version of ll2xy Fri, 28 Mar 2014 01:17:36 GMT Mathieu Morlighem [17586] * issm/trunk-jpl/CMakeLists.txt (deleted) * issm/trunk-jpl/m4/issm_options.cmake (deleted) * issm/trunk-jpl/src/CMakeLists.txt (deleted) * issm/trunk-jpl/src/c/CMakeLists.txt (deleted) CHG: removing cmake files, Gil is giving up the idea Fri, 28 Mar 2014 01:14:43 GMT Mathieu Morlighem [17585] * issm/trunk-jpl/src/c/analyses/AdjointBalancethicknessAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/AdjointHorizAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/BalancethicknessAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/BalancevelocityAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/DamageEvolutionAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/EnthalpyAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ExtrapolationAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ExtrudeFromBaseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ExtrudeFromTopAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/FreeSurfaceBaseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCEfficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCInefficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/L2ProjectionBaseAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/L2ProjectionEPLAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/LevelsetAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/MasstransportAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/MeltingAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmoothedSurfaceSlopeXAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmoothedSurfaceSlopeYAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceSIAAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/StressbalanceVerticalAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/ThermalAnalysis.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/Loads/Pengrid.cpp (modified) CHG: renaming OnBed OnBase for consistency Fri, 28 Mar 2014 00:59:12 GMT Mathieu Morlighem [17584] * issm/trunk-jpl/src/c/analyses/FreeSurfaceBaseAnalysis.cpp (modified) * issm/trunk-jpl/test/Archives/Archive703.nc (modified) NEW: fixing constraints at the bed for grounded free surface bed Fri, 28 Mar 2014 00:12:15 GMT Mathieu Morlighem [17583] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) BUG: fixing compilation Thu, 27 Mar 2014 23:29:34 GMT hongjuy [17582] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) CHG: some minor details in FS contact migration Thu, 27 Mar 2014 23:07:51 GMT cborstad [17581] * issm/trunk-jpl/src/m/plot/processmesh.py (modified) BUG: missed import of MatlabFuncs Thu, 27 Mar 2014 23:04:17 GMT Mathieu Morlighem [17580] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) NEW: added FS contact method for GL (not implemented yet) Thu, 27 Mar 2014 22:59:05 GMT Mathieu Morlighem [17579] * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Seg.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tetra.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/modules/GroundinglineMigrationx/GroundinglineMigrationx.cpp (modified) * issm/trunk-jpl/src/c/modules/GroundinglineMigrationx/GroundinglineMigrationx.h (modified) * issm/trunk-jpl/src/m/classes/groundingline.m (modified) * issm/trunk-jpl/src/m/classes/groundingline.py (modified) NEW: added FS contact method for GL (not implemented yet) Thu, 27 Mar 2014 22:30:25 GMT Eric.Larour [17578] * issm/trunk-jpl/src/m/plot/processmesh.m (modified) CHG: fixed simple name bug. Thu, 27 Mar 2014 22:24:39 GMT Mathieu Morlighem [17577] * issm/trunk-jpl/src/m/plot/processmesh.m (modified) BUG: fixed processmesh for 2d meshes Thu, 27 Mar 2014 22:21:03 GMT Mathieu Morlighem [17576] * issm/trunk-jpl/src/m/plot/processmesh.m (modified) BUG: fixed processmesh for 2d meshes Thu, 27 Mar 2014 21:46:14 GMT Mathieu Morlighem [17575] * issm/trunk-jpl/src/m/miscellaneous/vorticity.m (added) NEW: added vorticity.m Thu, 27 Mar 2014 21:14:06 GMT Mathieu Morlighem [17574] * issm/trunk-jpl/src/m/solve/waitonlock.py (modified) BUG: fixed gethostname Thu, 27 Mar 2014 21:04:41 GMT seroussi [17573] * issm/trunk-jpl/test/NightlyRun/test435.m (modified) CHG: minor tolerances Thu, 27 Mar 2014 20:53:31 GMT Mathieu Morlighem [17572] * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/ContactEnum.m (added) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) NEW: new GL migration option for FS based on contact mechanics Thu, 27 Mar 2014 20:46:07 GMT Mathieu Morlighem [17571] * issm/trunk-jpl/src/m/solve/waitonlock.m (modified) BUG: fixing waitonlock for acenet Thu, 27 Mar 2014 20:34:37 GMT Eric.Larour [17570] * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_la_theta.cpp (modified) CHG: fixed issues with AD compile. Thu, 27 Mar 2014 20:16:06 GMT Eric.Larour [17569] * issm/trunk-jpl/src/m/solve/waitonlock.m (modified) * issm/trunk-jpl/src/m/solve/waitonlock.py (modified) CHG: shortening wait on lock. Thu, 27 Mar 2014 20:15:29 GMT Eric.Larour [17568] * issm/trunk-jpl/src/m/plot/applyoptions.m (modified) CHG: added marker size option Thu, 27 Mar 2014 20:15:08 GMT Eric.Larour [17567] * issm/trunk-jpl/src/m/boundaryconditions/PattynSMB.m (added) * issm/trunk-jpl/src/m/boundaryconditions/PattynSMB.py (added) CHG: generate SMB in Antarctica from simple semi-empirical ... Thu, 27 Mar 2014 19:29:18 GMT Mathieu Morlighem [17566] * issm/trunk-jpl/src/m/classes/model.m (modified) CHG: fixed load of old mesh classes Thu, 27 Mar 2014 19:22:40 GMT Mathieu Morlighem [17565] * issm/trunk-jpl/src/m/classes/model.m (modified) * issm/trunk-jpl/src/m/classes/model.py (modified) BUG: fixing extract 3D Thu, 27 Mar 2014 19:09:21 GMT Mathieu Morlighem [17564] * issm/trunk-jpl/src/c/analyses/BalancevelocityAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCEfficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/HydrologyDCInefficientAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmoothedSurfaceSlopeXAnalysis.cpp (modified) * issm/trunk-jpl/src/c/analyses/SmoothedSurfaceSlopeYAnalysis.cpp (modified) * issm/trunk-jpl/src/m/classes/model.m (modified) * issm/trunk-jpl/src/m/classes/model.py (modified) BUG: fixing some issues realted to mesh subclasses