# # ChangeLog for / # # Generated by Trac 1.4.3 # 05/10/25 12:05:33 Sat, 22 Jun 2013 20:42:23 GMT Mathieu Morlighem [15324] * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/MINIEnum.m (added) * issm/trunk-jpl/src/m/enum/MaximumNumberOfEnums.m (modified) * issm/trunk-jpl/src/m/enum/TriaP1InputEnum.m (deleted) NEW: added one more enum Sat, 22 Jun 2013 20:25:33 GMT Mathieu Morlighem [15323] * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) CHG: extended dynamic GetB for other solutions + cosmetics Sat, 22 Jun 2013 18:55:28 GMT Eric.Larour [15322] * issm/trunk-jpl/src/c/classes/IndependentObject.cpp (modified) CHG: copy object, modify Sat, 22 Jun 2013 18:45:47 GMT Eric.Larour [15321] * issm/trunk-jpl/src/c/classes/IndependentObject.cpp (modified) * issm/trunk-jpl/src/c/classes/IndependentObject.h (modified) * issm/trunk-jpl/src/c/classes/IoModel.cpp (modified) CHG: getting rid of numberofvertices. Sat, 22 Jun 2013 18:29:03 GMT Mathieu Morlighem [15320] * issm/trunk-jpl/externalpackages/mpich/install-2_1.4-linux64.sh (modified) * issm/trunk-jpl/externalpackages/mpich/install-2_1.4-macosx32.sh (modified) * issm/trunk-jpl/externalpackages/mpich/install-2_1.4-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/mpich/install-2_1.5-linux64.sh (modified) * issm/trunk-jpl/externalpackages/mpich/install-2_1.5-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/mpich/install-2_1.5-walgreen.sh (modified) CHG: prefix is now mpich Sat, 22 Jun 2013 18:24:22 GMT Mathieu Morlighem [15319] * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-linux64-astrid.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx32-eric.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx32-ogive.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-linux64-astrid.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-macosx32-mathieu.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-macosx32-ogive.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-ubuntu64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-win7.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.2-linux64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.2-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.2-ubuntu64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.3-linux64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.3-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.3-walgreen.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.4-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-dev-linux64.sh (modified) CHG: mpich2 is now in externalpackages/mpich Sat, 22 Jun 2013 18:22:34 GMT Mathieu Morlighem [15318] * issm/trunk-jpl/configs/config-arm-linux-matlab.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-gia.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-mpich1.0.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-petsc2.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-petsc3.3.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-petscdev.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid.sh (modified) * issm/trunk-jpl/configs/config-linux64-cloud.sh (modified) * issm/trunk-jpl/configs/config-linux64-larsen-petsc3.2.sh (modified) * issm/trunk-jpl/configs/config-linux64-murdo-nopetsc.sh (modified) * issm/trunk-jpl/configs/config-linux64-murdo.sh (modified) * issm/trunk-jpl/configs/config-linux64-ubuntu64.sh (modified) * issm/trunk-jpl/configs/config-macosx-snowleopard-bothapis.sh (modified) * issm/trunk-jpl/configs/config-macosx-snowleopard-python.sh (modified) * issm/trunk-jpl/configs/config-macosx32-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx32-ogive.sh (modified) * issm/trunk-jpl/configs/config-macosx64-basile.sh (modified) * issm/trunk-jpl/configs/config-macosx64-chris-bothapis.sh (modified) * issm/trunk-jpl/configs/config-macosx64-chris-python.sh (modified) * issm/trunk-jpl/configs/config-macosx64-chris.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour-gia.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour.sh (modified) * issm/trunk-jpl/configs/config-macosx64-lion-helene.sh (modified) * issm/trunk-jpl/configs/config-macosx64-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx64-mlion-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx64-nicole.sh (modified) * issm/trunk-jpl/configs/config-macosx64-ogive.sh (modified) * issm/trunk-jpl/configs/config-macosx64-simple.sh (modified) * issm/trunk-jpl/configs/config-macosx64-sophie.sh (modified) * issm/trunk-jpl/configs/config-macosx64.sh (modified) * issm/trunk-jpl/configs/config-walgreen.sh (modified) CHG: mpich2 is now in externalpackages/mpich Sat, 22 Jun 2013 17:59:15 GMT Eric.Larour [15317] * issm/trunk-jpl/src/c/classes/IndependentObject.cpp (modified) * issm/trunk-jpl/src/c/classes/IndependentObject.h (modified) CHG: some modifications to the IndependentObject so as to allow an ... Sat, 22 Jun 2013 17:58:18 GMT Eric.Larour [15316] * issm/trunk-jpl/src/m/classes/model/model.m (modified) * issm/trunk-jpl/src/m/classes/settings.m (modified) CHG: new upload and download capability. Handy when trying to save a ... Sat, 22 Jun 2013 17:56:49 GMT Eric.Larour [15315] * issm/trunk-jpl/src/m/os/issmscpout.m (modified) CHG: on localhost, we are creating symlinks. In some scenarios, we ... Sat, 22 Jun 2013 16:20:42 GMT Mathieu Morlighem [15314] * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) CHG: cosmetics Sat, 22 Jun 2013 15:54:37 GMT Mathieu Morlighem [15313] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/PentaRef.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/PentaRef.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/TriaRef.h (modified) CHG: renamed GetL GetBMacyealFriction and GetBPattynFriction for ... Sat, 22 Jun 2013 14:37:35 GMT Mathieu Morlighem [15312] * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) CHG: changed BMacAyeeal and BprimeMacAyeal for quadratic elements Sat, 22 Jun 2013 13:54:53 GMT Mathieu Morlighem [15311] * issm/trunk-jpl/test/Archives/Archive419.nc (modified) CHG: updating tiling archive Sat, 22 Jun 2013 03:56:30 GMT Mathieu Morlighem [15310] * issm/trunk-jpl/externalpackages/export_fig/license.txt (modified) * issm/trunk-jpl/externalpackages/export_fig/print2eps.m (modified) * issm/trunk-jpl/externalpackages/export_fig/user_string.m (modified) CHG: updating export_fig to latest version Sat, 22 Jun 2013 03:53:58 GMT Mathieu Morlighem [15309] * issm/trunk-jpl/externalpackages/mpich2 (deleted) DEL: moved mpich2 to mpich (mpich2 changed its name after the release ... Sat, 22 Jun 2013 03:30:29 GMT Mathieu Morlighem [15308] * issm/trunk-jpl/configs/config-altix64-castor.sh (modified) * issm/trunk-jpl/configs/config-arm-linux-matlab.sh (modified) * issm/trunk-jpl/configs/config-cosmos.sh (modified) * issm/trunk-jpl/configs/config-discover.sh (modified) * issm/trunk-jpl/configs/config-greenplanet.sh (modified) * issm/trunk-jpl/configs/config-hoffman2.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-gia.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-mpich1.0.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-petsc2.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-petsc3.3.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-petscdev.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid.sh (modified) * issm/trunk-jpl/configs/config-linux64-cloud.sh (modified) * issm/trunk-jpl/configs/config-linux64-larsen-gia.sh (modified) * issm/trunk-jpl/configs/config-linux64-larsen-petsc3.2.sh (modified) * issm/trunk-jpl/configs/config-linux64-larsen.sh (modified) * issm/trunk-jpl/configs/config-linux64-murdo-nopetsc.sh (modified) * issm/trunk-jpl/configs/config-linux64-murdo.sh (modified) * issm/trunk-jpl/configs/config-linux64-ubuntu64.sh (modified) * issm/trunk-jpl/configs/config-macosx-snowleopard-bothapis.sh (modified) * issm/trunk-jpl/configs/config-macosx-snowleopard-python.sh (modified) * issm/trunk-jpl/configs/config-macosx32-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx32-ogive.sh (modified) * issm/trunk-jpl/configs/config-macosx64-basile.sh (modified) * issm/trunk-jpl/configs/config-macosx64-chris-bothapis.sh (modified) * issm/trunk-jpl/configs/config-macosx64-chris-python.sh (modified) * issm/trunk-jpl/configs/config-macosx64-chris.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour-gia.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour.sh (modified) * issm/trunk-jpl/configs/config-macosx64-lion-helene.sh (modified) * issm/trunk-jpl/configs/config-macosx64-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx64-mlion-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx64-nicole.sh (modified) * issm/trunk-jpl/configs/config-macosx64-ogive.sh (modified) * issm/trunk-jpl/configs/config-macosx64-simple.sh (modified) * issm/trunk-jpl/configs/config-macosx64-sophie.sh (modified) * issm/trunk-jpl/configs/config-macosx64.sh (modified) * issm/trunk-jpl/configs/config-pleiades-petsc2.sh (modified) * issm/trunk-jpl/configs/config-pleiades-petsc3.2.sh (modified) * issm/trunk-jpl/configs/config-pleiades-petsc3.3.sh (modified) * issm/trunk-jpl/configs/config-pleiades-petscdev.sh (modified) * issm/trunk-jpl/configs/config-walgreen.sh (modified) * issm/trunk-jpl/configs/config-win7-32.sh (modified) * issm/trunk-jpl/configs/config-win7-64-parallel.sh (modified) * issm/trunk-jpl/configs/config-win7-64.sh (modified) * issm/trunk-jpl/externalpackages/matlab/install.sh (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: moved --with-mpi-lib to --with-mpi-libflags to fix NR Sat, 22 Jun 2013 00:43:58 GMT glperez [15307] * issm/trunk-jpl/configs/config-win7-32.sh (modified) * issm/trunk-jpl/configs/config-win7-64.sh (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Changed MPI options to separate libraries from libpath. Fri, 21 Jun 2013 23:39:07 GMT Mathieu Morlighem [15306] * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/CreateParameters.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/objects/PetscMat.cpp (modified) FIX: matrix allocation for 2d/3d couplings. nodes at the base are ... Fri, 21 Jun 2013 21:42:56 GMT Mathieu Morlighem [15305] * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) DEL: removed dead code Fri, 21 Jun 2013 18:38:56 GMT Mathieu Morlighem [15304] * issm/trunk-jpl/configs/config-linux64-larsen.sh (modified) CHG: added boost for dakota Fri, 21 Jun 2013 18:28:50 GMT Mathieu Morlighem [15303] * issm/trunk-jpl/externalpackages/vim/addons/vim/syntax/Synchronize.sh (modified) * issm/trunk-jpl/externalpackages/vim/addons/vim/syntax/c.vim (modified) CHG: updating syntax hilighting Fri, 21 Jun 2013 18:18:36 GMT Mathieu Morlighem [15302] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: missing interpolation Fri, 21 Jun 2013 16:21:46 GMT Mathieu Morlighem [15301] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) BUG: fixed jacobian matrix with new format Fri, 21 Jun 2013 16:07:23 GMT Mathieu Morlighem [15300] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs/ControlInput.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs/PentaP1Input.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs/TriaInput.h (modified) * issm/trunk-jpl/src/c/classes/Materials/Matdamageice.cpp (modified) * issm/trunk-jpl/src/c/classes/Materials/Matice.cpp (modified) CHG: force user to specify interpolation for TriaInput Fri, 21 Jun 2013 15:50:14 GMT Mathieu Morlighem [15299] * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) CHG: fixed some memory leaks Fri, 21 Jun 2013 15:41:36 GMT Mathieu Morlighem [15298] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/classes/Elements/PentaRef.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/PentaRef.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/TriaRef.h (modified) * issm/trunk-jpl/src/c/classes/Inputs/ControlInput.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs/PentaP1Input.cpp (modified) * issm/trunk-jpl/src/c/classes/Inputs/TriaInput.cpp (added) * issm/trunk-jpl/src/c/classes/Inputs/TriaInput.h (added) * issm/trunk-jpl/src/c/classes/Inputs/TriaP1Input.cpp (deleted) * issm/trunk-jpl/src/c/classes/Inputs/TriaP1Input.h (deleted) * issm/trunk-jpl/src/c/classes/Loads/Icefront.cpp (modified) * issm/trunk-jpl/src/c/classes/Materials/Matdamageice.cpp (modified) * issm/trunk-jpl/src/c/classes/Materials/Matice.cpp (modified) * issm/trunk-jpl/src/c/classes/classes.h (modified) * issm/trunk-jpl/src/c/classes/gauss/GaussTria.cpp (modified) * issm/trunk-jpl/src/c/classes/gauss/GaussTria.h (modified) * issm/trunk-jpl/src/c/modules/ModelProcessorx/DiagnosticHoriz/CreateNodesDiagnosticHoriz.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/TriaInputEnum.m (added) CHG: preparing quadratic elements for MacAyeal (Still some work to ... Fri, 21 Jun 2013 14:05:31 GMT Mathieu Morlighem [15297] * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: reverted back for windows build Fri, 21 Jun 2013 07:05:39 GMT glperez [15296] * issm/trunk-jpl/externalpackages/autotools/install-win.sh (added) * issm/trunk-jpl/externalpackages/autotools/patches (added) * issm/trunk-jpl/externalpackages/autotools/patches/libtool.m4.patch (added) ADD: Added an install script and patch for Windows build. Fri, 21 Jun 2013 04:30:51 GMT Mathieu Morlighem [15295] * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) BUG: fixing NR for now Fri, 21 Jun 2013 02:26:38 GMT glperez [15294] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Fixed BLAS lib directory issue. Thu, 20 Jun 2013 22:16:36 GMT schlegel [15293] * issm/trunk-jpl/src/c/classes/Materials/Matice.cpp (modified) CHG: add option for sampling penta rheologyB Thu, 20 Jun 2013 06:18:21 GMT glperez [15292] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Matlab related macro change for Windows build. Thu, 20 Jun 2013 06:10:54 GMT glperez [15291] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Matlab related macro change for Windows build. Thu, 20 Jun 2013 06:02:40 GMT glperez [15290] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Matlab related macro change for Windows build. Thu, 20 Jun 2013 05:37:27 GMT Eric.Larour [15289] * issm/trunk-jpl/configs/config-win7-64.sh (modified) CHG; new libtools compatible config file Thu, 20 Jun 2013 05:17:44 GMT glperez [15288] * issm/trunk-jpl/configs/config-win7-32.sh (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: Changes for Windows build using Libtool. Wed, 19 Jun 2013 23:26:07 GMT ltnguyen [15287] * issm/trunk-jpl/src/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ISSM.java (modified) * issm/trunk-jpl/src/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ISSMAPP.java (modified) * issm/trunk-jpl/src/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ImageList.java (modified) * issm/trunk-jpl/src/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ImageListFromUrl.java (added) * issm/trunk-jpl/src/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/ImageResizer.java (modified) * issm/trunk-jpl/src/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/IssmJni.java (modified) * issm/trunk-jpl/src/mobile/android/ISSM_APP/src/gov/nasa/jpl/issm/MyGLSurfaceView.java (modified) final modification for android project, freezing project and start ... Wed, 19 Jun 2013 21:16:58 GMT bdef [15286] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) BUG: geting read of unnecessary delete Wed, 19 Jun 2013 17:44:08 GMT jschierm [15285] * issm/trunk-jpl/test/NightlyRun/test234.m (modified) CHG: Handle Dakota major.minor.patch version numbers. Wed, 19 Jun 2013 17:30:13 GMT jschierm [15284] * issm/trunk-jpl/src/m/classes/qmu/@dakota_method/dmeth_params_write.m (modified) CHG: Handle Dakota major.minor.patch version numbers. Wed, 19 Jun 2013 15:48:57 GMT bdef [15283] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: fixing memory Leak and minor code modifications Wed, 19 Jun 2013 15:18:12 GMT Mathieu Morlighem [15282] * issm/trunk-jpl/src/c/classes/Elements/TriaRef.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/TriaRef.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/MaximumNumberOfEnums.m (modified) * issm/trunk-jpl/src/m/enum/P2Enum.m (added) CHG: preparing for P2 interpolation Wed, 19 Jun 2013 15:17:27 GMT Mathieu Morlighem [15281] * issm/trunk-jpl/src/wrappers/python/io/ApiPrintf.cpp (modified) CHG: fixing complaining compiler Tue, 18 Jun 2013 21:20:06 GMT Eric.Larour [15280] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: fixed issue with the 4.2+ pattern matching, which was missing Tue, 18 Jun 2013 20:16:57 GMT Eric.Larour [15279] * issm/trunk-jpl/scripts/issmconfiguration.sh (modified) CHG: added clean option Tue, 18 Jun 2013 03:57:54 GMT seroussi [15278] * issm/trunk-jpl/src/c/shared/Numerics/BrentSearch.cpp (modified) FIX: minor BrentSearch display Tue, 18 Jun 2013 00:45:05 GMT bdef [15277] * issm/trunk-jpl/src/m/contrib/paraview/writeVTKcell.m (modified) CHG: Minor clean-up Mon, 17 Jun 2013 23:23:06 GMT bdef [15276] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_hydro_nonlinear.cpp (modified) CHG: So far the last working version of the hydrological Code (Still ... Mon, 17 Jun 2013 23:20:02 GMT bdef [15275] * issm/trunk-jpl/src/m/contrib/paraview/writeVTKcell.m (modified) CHG:Adding a directory to put the result in the vtk Output Mon, 17 Jun 2013 22:11:45 GMT adhikari [15274] * issm/trunk-jpl/configs/config-linux64-larsen-gia.sh (added) NEW: config for gia in larsen Mon, 17 Jun 2013 15:33:26 GMT bdef [15273] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_hydro_nonlinear.cpp (modified) * issm/trunk-jpl/src/m/classes/hydrologydc.m (modified) CHG: Minor changes in the hydrological solver Fri, 14 Jun 2013 23:27:04 GMT Mathieu Morlighem [15272] * issm/trunk-jpl/src/c/toolkits/petsc/patches/ISSMToPetscMatrixType.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/petscpatches.h (modified) CHG: no need to declare MatType as const (Warning on pleiades Fri, 14 Jun 2013 22:52:44 GMT Mathieu Morlighem [15271] * issm/trunk-jpl/externalpackages/petsc/install-3.3-pleiades.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.4-pleiades.sh (added) NEW: added PETSc 3.4 support for pleiades Fri, 14 Jun 2013 05:13:02 GMT glperez [15270] * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: Changed the order of our libraries. Fixed compilation issue. Fri, 14 Jun 2013 02:35:41 GMT Mathieu Morlighem [15269] * issm/trunk-jpl/src/wrappers/matlab/io/ApiPrintf.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/CheckNumMatlabArguments.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/FetchMatlabData.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabMatrixToDoubleMatrix.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabMatrixToIssmMat.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabMatrixToMatrix.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabNArrayToNArray.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabVectorToDoubleVector.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabVectorToIssmSeqVec.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabVectorToIssmVec.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabVectorToPetscVec.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/MatlabVectorToVector.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/OptionParse.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/WriteMatlabData.cpp (modified) * issm/trunk-jpl/src/wrappers/matlab/io/matlabio.h (modified) CHG: fixed some header files Fri, 14 Jun 2013 00:30:33 GMT Eric.Larour [15268] * issm/trunk-jpl/externalpackages/cccl/issm/cccl (modified) CHG: fixed cccl Thu, 13 Jun 2013 23:52:58 GMT Eric.Larour [15267] * issm/trunk-jpl/externalpackages/cccl/issm/cccl (modified) CHG: removed exit 0, very dangerous Thu, 13 Jun 2013 23:48:51 GMT glperez [15266] * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: Removed -no-undfined from API and Matlab libraries. Thu, 13 Jun 2013 23:36:11 GMT glperez [15265] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: Removed -no-undefined Libtool flag for non Windows builds. Thu, 13 Jun 2013 23:24:01 GMT glperez [15264] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: Fixed an error with /export flag being passed to GNU compiler. Thu, 13 Jun 2013 23:16:18 GMT Eric.Larour [15263] * issm/trunk-jpl/externalpackages/cccl/issm/cccl (modified) CHG: fixed issue with comkpiler Thu, 13 Jun 2013 23:14:16 GMT Mathieu Morlighem [15262] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: fix mex compilation on linux (was using cygwin settings) Thu, 13 Jun 2013 23:08:22 GMT Mathieu Morlighem [15261] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: fixed typo Thu, 13 Jun 2013 23:03:35 GMT Eric.Larour [15260] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: fixing issue with NR on linux Thu, 13 Jun 2013 22:53:35 GMT glperez [15259] * issm/trunk-jpl/configs/config-win7-32.sh (modified) CHG: Changed config variables to Unix style. Thu, 13 Jun 2013 22:52:40 GMT Eric.Larour [15258] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: corrected wrong echo Thu, 13 Jun 2013 22:46:53 GMT glperez [15257] * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/wrappers/matlab/Makefile.am (modified) CHG: Changes to our m4 macros and Makefile.am for Windows. Thu, 13 Jun 2013 22:46:45 GMT Eric.Larour [15256] * issm/trunk-jpl/externalpackages/windows/fortran_environment.sh (added) * issm/trunk-jpl/externalpackages/windows/windows_environment.sh (modified) CHG: fortran environment shell variables Thu, 13 Jun 2013 22:26:42 GMT Eric.Larour [15255] * issm/trunk-jpl/externalpackages/cccl/issm/cccl (modified) CHG: better cccl Thu, 13 Jun 2013 17:56:03 GMT Mathieu Morlighem [15254] * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_hydro_nonlinear.cpp (modified) CHG: convergence needs to be initialized as false Thu, 13 Jun 2013 17:29:11 GMT Mathieu Morlighem [15253] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_hydro_nonlinear.cpp (modified) BUG: need to update constraints when updateDOmainx is called Thu, 13 Jun 2013 16:45:43 GMT Mathieu Morlighem [15252] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) CHG: moving mask transformation from UpdateFromSolution to GetMask Thu, 13 Jun 2013 16:16:56 GMT Mathieu Morlighem [15251] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: minor, need to reduce and broadcast counter Thu, 13 Jun 2013 16:10:14 GMT Mathieu Morlighem [15250] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: fixing node sid indexing (need to check analysis first) Thu, 13 Jun 2013 15:36:55 GMT bdef [15249] * issm/trunk-jpl/src/c/classes/Elements/Element.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Penta.h (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) * issm/trunk-jpl/src/c/classes/FemModel.h (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_hydro_nonlinear.cpp (modified) CHG: Changes in the way we deal with the EPL mask Thu, 13 Jun 2013 15:21:15 GMT bdef [15248] * issm/trunk-jpl/src/c/shared/Enum/EnumDefinitions.h (modified) * issm/trunk-jpl/src/c/shared/Enum/EnumToStringx.cpp (modified) * issm/trunk-jpl/src/c/shared/Enum/StringToEnumx.cpp (modified) * issm/trunk-jpl/src/m/enum/EnumDefinitions.py (modified) * issm/trunk-jpl/src/m/enum/MaximumNumberOfEnums.m (modified) * issm/trunk-jpl/src/m/enum/NodeSIdEnum.m (added) NEW:Adding NodeSIdEnum Wed, 12 Jun 2013 19:55:41 GMT Mathieu Morlighem [15247] * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/BuildDakotaCustom.cmake.patch (modified) * issm/trunk-jpl/externalpackages/dakota/install-5.3.1-linux64.sh (moved) CHG: do not hard code location of BLAS_LIBS and LAPACK_LIBS (change ... Wed, 12 Jun 2013 17:12:53 GMT jschierm [15246] * issm/trunk-jpl/externalpackages/dakota/install-5.3.1-linux64-astrid.sh (added) NEW: Dakota 5.3.1 install file. Wed, 12 Jun 2013 17:11:27 GMT jschierm [15245] * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1 (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/BuildDakotaCustom.cmake.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/DakotaDev.cmake.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/NonDLocalReliability.cpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/NonDSampling.cpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/ParallelLibrary.cpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/ParallelLibrary.hpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3.1/pecos_global_defs.hpp.patch (added) * issm/trunk-jpl/externalpackages/dakota/configs/5.3/ParallelLibrary.cpp.patch (modified) * issm/trunk-jpl/externalpackages/dakota/configs/5.3/ParallelLibrary.hpp.patch (modified) NEW: Dakota 5.3.1 install and patch files (along with a couple 5.3 ... Wed, 12 Jun 2013 16:52:31 GMT jschierm [15244] * issm/trunk-jpl/m4/issm_options.m4 (modified) CHG: Changed DAKOTA_PATCH to DAKOTA_BUILD per Mathieu. Wed, 12 Jun 2013 16:50:56 GMT jschierm [15243] * issm/trunk-jpl/src/m/os/dakotaversion.m (modified) * issm/trunk-jpl/src/m/os/dakotaversion.py (modified) CHG: Updated dakotaversion() for change in variable name. Wed, 12 Jun 2013 14:41:49 GMT Mathieu Morlighem [15242] * issm/trunk-jpl/test/NightlyRun/test405.m (modified) * issm/trunk-jpl/test/NightlyRun/test405.py (modified) CHG: relaxed tolerances Wed, 12 Jun 2013 03:25:01 GMT Mathieu Morlighem [15241] * issm/trunk-jpl/etc/environment.sh (modified) CHG: add netcdf/bin for ncdump Wed, 12 Jun 2013 01:47:07 GMT Mathieu Morlighem [15240] * issm/trunk-jpl/m4/issm_options.m4 (modified) BUG: fixed dakota version issue with [0-9], need @:<@ and @:>@ Tue, 11 Jun 2013 21:26:19 GMT jschierm [15239] * issm/trunk-jpl/m4/issm_options.m4 (modified) NEW: Updated issm_options.m4 for Dakota 5.3.1 (and major.minor.patch ... Tue, 11 Jun 2013 17:31:59 GMT Mathieu Morlighem [15238] * issm/trunk-jpl/src/c/toolkits/objects/Matrix.h (modified) * issm/trunk-jpl/src/c/toolkits/petsc/objects/PetscMat.cpp (modified) CHG: AllocationInfo does not work for IssmMat Tue, 11 Jun 2013 15:32:13 GMT Mathieu Morlighem [15237] * issm/trunk-jpl/src/c/classes/FemModel.cpp (modified) CHG: minor Tue, 11 Jun 2013 15:05:55 GMT Mathieu Morlighem [15236] * issm/trunk-jpl/test/Archives/Archive415.nc (modified) * issm/trunk-jpl/test/NightlyRun/test317.m (modified) * issm/trunk-jpl/test/NightlyRun/test317.py (modified) * issm/trunk-jpl/test/NightlyRun/test415.m (modified) * issm/trunk-jpl/test/NightlyRun/test415.py (modified) CHG: relaxed some tolerances Tue, 11 Jun 2013 15:01:31 GMT Mathieu Morlighem [15235] * issm/trunk-jpl/externalpackages/petsc/install-3.4-linux64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.4-macosx64.sh (modified) CHG: changed 3.4.0 to 3.4.1 Tue, 11 Jun 2013 01:22:38 GMT bdef [15234] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/solutionsequences/solutionsequence_hydro_nonlinear.cpp (modified) BUG:fixing for one layer cases (do not update epl results in this case) Mon, 10 Jun 2013 23:17:54 GMT Mathieu Morlighem [15233] * issm/trunk-jpl/test/Archives/Archive204.nc (modified) * issm/trunk-jpl/test/Archives/Archive209.nc (modified) * issm/trunk-jpl/test/Archives/Archive315.nc (modified) * issm/trunk-jpl/test/Archives/Archive405.nc (modified) * issm/trunk-jpl/test/Archives/Archive407.nc (modified) * issm/trunk-jpl/test/Archives/Archive419.nc (modified) * issm/trunk-jpl/test/Archives/Archive507.nc (modified) * issm/trunk-jpl/test/Archives/Archive509.nc (modified) * issm/trunk-jpl/test/Archives/Archive612.nc (modified) CHG: new archives for PETSc 3.4 Mon, 10 Jun 2013 23:07:42 GMT bdef [15232] * issm/trunk-jpl/src/m/classes/hydrologydc.m (modified) CHG:putting emacs compatible fold marks Mon, 10 Jun 2013 21:15:10 GMT Mathieu Morlighem [15231] * issm/trunk-jpl/etc/environment.sh (modified) NEW: added proj.4 in path Mon, 10 Jun 2013 21:00:22 GMT Mathieu Morlighem [15230] * issm/trunk-jpl/src/c/classes/Elements/Tria.cpp (modified) * issm/trunk-jpl/src/c/classes/Elements/Tria.h (modified) * issm/trunk-jpl/src/c/classes/Node.cpp (modified) * issm/trunk-jpl/src/c/classes/Node.h (modified) CHG: added AllActive function to Tria, that checks that all nodes are ... Mon, 10 Jun 2013 20:48:39 GMT Mathieu Morlighem [15229] * issm/trunk-jpl/src/m/contrib/gslib/pkriging.m (modified) CHG: improved parallel kriging Mon, 10 Jun 2013 20:41:28 GMT seroussi [15228] * issm/trunk-jpl/etc/environment.sh (modified) FIX: added mpich in environment.sh Mon, 10 Jun 2013 20:29:55 GMT Mathieu Morlighem [15227] * issm/trunk-jpl/test/Archives/Archive120.nc (modified) * issm/trunk-jpl/test/Archives/Archive204.nc (modified) * issm/trunk-jpl/test/Archives/Archive206.nc (modified) * issm/trunk-jpl/test/Archives/Archive209.nc (modified) * issm/trunk-jpl/test/Archives/Archive237.nc (modified) * issm/trunk-jpl/test/Archives/Archive503.nc (modified) * issm/trunk-jpl/test/Archives/Archive509.nc (modified) * issm/trunk-jpl/test/Archives/Archive510.nc (modified) * issm/trunk-jpl/test/Archives/Archive612.nc (modified) CHG: update some archives for PETSc 3.4 Mon, 10 Jun 2013 20:19:49 GMT Mathieu Morlighem [15226] * issm/trunk-jpl/configs/config-linux64-larsen.sh (added) CHG: now use PETSc 3.4 for NR Mon, 10 Jun 2013 20:19:27 GMT Mathieu Morlighem [15225] * issm/trunk-jpl/configs/config-linux64-larsen-petsc3.2.sh (moved) CHG: now use PETSc 3.4 for NR