# # ChangeLog for / # # Generated by Trac 1.4.3 # 05/19/25 11:37:15 Tue, 01 May 2012 22:59:38 GMT Mathieu Morlighem [12165] * issm/trunk-jpl/src/m/utils/ImageProcessing/gradient_perso.m (deleted) * issm/trunk-jpl/src/m/utils/ImageProcessing/transp.m (deleted) not needed anymore Tue, 01 May 2012 22:59:18 GMT Mathieu Morlighem [12164] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/modules/Krigingx (added) * issm/trunk-jpl/src/c/modules/Krigingx/Krigingx.cpp (added) * issm/trunk-jpl/src/c/modules/Krigingx/Krigingx.h (added) * issm/trunk-jpl/src/c/modules/modules.h (modified) * issm/trunk-jpl/src/modules/Kriging (added) * issm/trunk-jpl/src/modules/Kriging/Kriging.cpp (added) * issm/trunk-jpl/src/modules/Kriging/Kriging.h (added) * issm/trunk-jpl/src/modules/matlab/Makefile.am (modified) Added Kriging module (empty for now) Tue, 01 May 2012 16:11:26 GMT Mathieu Morlighem [12163] * issm/trunk-jpl/test/NightlyRun/runme.m (modified) updating runme.m as ISSM_TIER does not exist anymore Tue, 01 May 2012 15:03:39 GMT Mathieu Morlighem [12162] * issm/meetings (deleted) Not needed anymore, use sftp instead Tue, 01 May 2012 14:54:24 GMT Mathieu Morlighem [12161] * issm/trunk-jpl/etc/environment.csh (modified) * issm/trunk-jpl/etc/environment.sh (modified) * issm/trunk-jpl/etc/environment_variables.csh (modified) * issm/trunk-jpl/etc/environment_variables.sh (modified) Changing ISSM_TIER to ISSM_DIR Tue, 01 May 2012 14:39:16 GMT Mathieu Morlighem [12160] * issm/trunk-jpl/cron/configs/linux64_daily (modified) * issm/trunk-jpl/cron/configs/linux64_nightly (modified) * issm/trunk-jpl/cron/configs/macosx64_daily (modified) * issm/trunk-jpl/cron/configs/macosx64_nightly (modified) * issm/trunk-jpl/cron/configs/win732 (modified) * issm/trunk-jpl/cron/configs/win764 (modified) * issm/trunk-jpl/cron/configs/winxp32 (modified) Changing ISSM_TIER to ISSM_DIR Tue, 01 May 2012 14:37:27 GMT Mathieu Morlighem [12159] * issm/trunk-jpl/scripts/GenerateReferences.sh (modified) * issm/trunk-jpl/scripts/archive.sh (modified) * issm/trunk-jpl/scripts/automakererun.sh (modified) * issm/trunk-jpl/scripts/cloc2html.py (modified) * issm/trunk-jpl/scripts/convertmatlabclasses.py (modified) * issm/trunk-jpl/scripts/dailyrun.sh (modified) * issm/trunk-jpl/scripts/getloc.sh (modified) * issm/trunk-jpl/scripts/issmconfiguration.sh (modified) * issm/trunk-jpl/scripts/report.sh (modified) * issm/trunk-jpl/scripts/run.sh (modified) * issm/trunk-jpl/scripts/windowsbuild.sh (modified) Changing ISSM_TIER to ISSM_DIR Tue, 01 May 2012 14:35:08 GMT Mathieu Morlighem [12158] * issm/trunk-jpl/startup.m (modified) * issm/trunk-jpl/startup.py (modified) Changing ISSM_TIER to ISSM_DIR Tue, 01 May 2012 14:33:59 GMT Mathieu Morlighem [12157] * issm/trunk-jpl/configs/config-altix64-castor.sh (modified) * issm/trunk-jpl/configs/config-arm-linux.sh (modified) * issm/trunk-jpl/configs/config-cosmos.sh (modified) * issm/trunk-jpl/configs/config-greenplanet.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-ad.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-mpich1.0.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid-petsc2.sh (modified) * issm/trunk-jpl/configs/config-linux64-astrid.sh (modified) * issm/trunk-jpl/configs/config-linux64-murdo-ad.sh (modified) * issm/trunk-jpl/configs/config-linux64-murdo-nopetsc.sh (modified) * issm/trunk-jpl/configs/config-linux64-murdo.sh (modified) * issm/trunk-jpl/configs/config-macosx32-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx32-ogive.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour-ad.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour-bothapis.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour-nopetsc.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour-python.sh (modified) * issm/trunk-jpl/configs/config-macosx64-larour.sh (modified) * issm/trunk-jpl/configs/config-macosx64-mathieu.sh (modified) * issm/trunk-jpl/configs/config-macosx64-nicole.sh (modified) * issm/trunk-jpl/configs/config-macosx64-ogive.sh (modified) * issm/trunk-jpl/configs/config-macosx64-sophie.sh (modified) * issm/trunk-jpl/configs/config-pleiades-petsc2.sh (modified) * issm/trunk-jpl/configs/config-pleiades.sh (modified) * issm/trunk-jpl/configs/config-win32-eric.sh (modified) * issm/trunk-jpl/configs/config-win7-32.sh (modified) * issm/trunk-jpl/configs/config-win7-64.sh (modified) Changing ISSM_TIER to ISSM_DIR Tue, 01 May 2012 14:28:35 GMT Mathieu Morlighem [12156] * issm/trunk-jpl/externalpackages/adic/install.sh (modified) * issm/trunk-jpl/externalpackages/adolc/install.sh (modified) * issm/trunk-jpl/externalpackages/android/android-sdk/install.sh (modified) * issm/trunk-jpl/externalpackages/autoconf/install.sh (modified) * issm/trunk-jpl/externalpackages/automake/install.sh (modified) * issm/trunk-jpl/externalpackages/bbftp/install.sh (modified) * issm/trunk-jpl/externalpackages/boost/install.sh (modified) * issm/trunk-jpl/externalpackages/bsdtar/install-win7.sh (modified) * issm/trunk-jpl/externalpackages/cccl/install-win7.orig.sh (modified) * issm/trunk-jpl/externalpackages/cmake/install.sh (modified) * issm/trunk-jpl/externalpackages/cppcheck/install.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-altix64-cosmos.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-linux64-astrid.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-linux64-murdo.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/dakota/install-pleiades.sh (modified) * issm/trunk-jpl/externalpackages/doxygen/install.sh (modified) * issm/trunk-jpl/externalpackages/gdal/install.sh (modified) * issm/trunk-jpl/externalpackages/gmake/install.sh (modified) * issm/trunk-jpl/externalpackages/graphviz/install.sh (modified) * issm/trunk-jpl/externalpackages/gsl/install-android-4.0.sh (modified) * issm/trunk-jpl/externalpackages/gsl/install-linux64-murdo.sh (modified) * issm/trunk-jpl/externalpackages/gsl/install-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/latex2rtf/install.sh (modified) * issm/trunk-jpl/externalpackages/libtool/install.sh (modified) * issm/trunk-jpl/externalpackages/metis/install-5.0.1-linux64.sh (modified) * issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-altix64.sh (modified) * issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-linux64.sh (modified) * issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-macosx32.sh (modified) * issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-win32.sh (modified) * issm/trunk-jpl/externalpackages/mpich2/install-1.4-linux64.sh (modified) * issm/trunk-jpl/externalpackages/mpich2/install-1.4-macosx32.sh (modified) * issm/trunk-jpl/externalpackages/mpich2/install-1.4-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/ncview/install.sh (modified) * issm/trunk-jpl/externalpackages/netcdf/install.sh (modified) * issm/trunk-jpl/externalpackages/pcre/install.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-altix64-castor.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-cosmos.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-linux64-astrid.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx32-eric.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx32-ogive.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-pleiades.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-win32-eric.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-2.3.2-win7.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-altix64-castor.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-cosmos.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-linux64-astrid.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-macosx32-mathieu.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-macosx32-ogive.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-pleiades.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.1-win7.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.2-greenplanet.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.2-linux64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.2-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-3.2-pleiades.sh (modified) * issm/trunk-jpl/externalpackages/petsc/install-dev-linux64.sh (modified) * issm/trunk-jpl/externalpackages/python/install.sh (modified) * issm/trunk-jpl/externalpackages/qhull/install.sh (modified) * issm/trunk-jpl/externalpackages/rats/install.sh (modified) * issm/trunk-jpl/externalpackages/rose/install.sh (modified) * issm/trunk-jpl/externalpackages/swig/install.sh (modified) * issm/trunk-jpl/externalpackages/tao/install.sh (modified) * issm/trunk-jpl/externalpackages/valgrind/install-altix64.sh (modified) * issm/trunk-jpl/externalpackages/valgrind/install-linux64.sh (modified) * issm/trunk-jpl/externalpackages/valgrind/install-macosx32.sh (modified) * issm/trunk-jpl/externalpackages/valgrind/install-macosx64.sh (modified) * issm/trunk-jpl/externalpackages/valgrind/install-win32.sh (modified) * issm/trunk-jpl/externalpackages/vim/install.sh (modified) Changing ISSM_TIER to ISSM_DIR Tue, 01 May 2012 14:28:25 GMT Mathieu Morlighem [12155] * issm/trunk-jpl/src/c/EnumDefinitions/Synchronize.sh (modified) * issm/trunk-jpl/src/c/modules/MeshProfileIntersectionx/SegmentIntersect.cpp (modified) * issm/trunk-jpl/src/c/shared/Numerics/Synchronize.sh (modified) * issm/trunk-jpl/src/m/classes/clusters/generic.m (modified) * issm/trunk-jpl/src/m/classes/clusters/generic.py (modified) * issm/trunk-jpl/src/m/model/modis.m (modified) * issm/trunk-jpl/src/m/model/petscversion.m (modified) * issm/trunk-jpl/src/m/utils/DataProcessing/TracksToMatrix.m (modified) * issm/trunk-jpl/src/m/utils/Miscellaneous/issmdoc.m (modified) * issm/trunk-jpl/src/m/utils/OS/ismumps.m (modified) * issm/trunk-jpl/src/m/utils/OS/ispetsc.m (modified) * issm/trunk-jpl/src/m/utils/OS/issmscpin.m (modified) * issm/trunk-jpl/src/m/utils/OS/issmscpout.m (modified) * issm/trunk-jpl/src/m/utils/OS/issmssh.m (modified) * issm/trunk-jpl/src/m/utils/Shell/flaimdir.m (modified) * issm/trunk-jpl/src/m/utils/Shell/issmdir.m (modified) * issm/trunk-jpl/src/m/utils/Shell/issmtier.m (deleted) * issm/trunk-jpl/src/m/utils/Shell/jplsvn.m (added) * issm/trunk-jpl/src/m/utils/Shell/ucisvn.m (added) Changing ISSM_TIER to ISSM_DIR Mon, 30 Apr 2012 04:31:41 GMT Eric.Larour [12154] * issm/trunk-jpl/externalpackages/windows/configs/sdk7.1.win7-64.sh (modified) Updated configuration Sun, 29 Apr 2012 20:56:42 GMT Eric.Larour [12153] * issm/trunk-jpl/cron/configs/win732 (modified) win732 configuration Sun, 29 Apr 2012 19:03:29 GMT Eric.Larour [12152] * issm/trunk-jpl/src/c/shared/Numerics/XZvectorsToCoordinateSystem.cpp (modified) isnan missing Sun, 29 Apr 2012 17:50:50 GMT Eric.Larour [12151] * issm/trunk-jpl/scripts/mail (added) Needed for some platforms that don't carry mailx Sun, 29 Apr 2012 16:22:02 GMT Mathieu Morlighem [12150] * issm/trunk-jpl/src/m/model/plot/plot_section.m (modified) expread has only one argument now Fri, 27 Apr 2012 15:35:07 GMT seroussi [12149] * issm/trunk-jpl/src/m/classes/groundingline.m (modified) bathymetry approximately equal to bed (10^-10) Fri, 27 Apr 2012 14:55:23 GMT seroussi [12148] * issm/trunk-jpl/src/m/utils/Exp/expdisp.m (modified) minor Fri, 27 Apr 2012 14:09:03 GMT Mathieu Morlighem [12147] * issm/trunk-jpl/src/m/Makefile.am (modified) removed Analysis Thu, 26 Apr 2012 20:30:52 GMT Mathieu Morlighem [12146] * issm/trunk-jpl/src/m/utils/Analysis (deleted) not needed anymore Thu, 26 Apr 2012 16:15:25 GMT Mathieu Morlighem [12145] * issm/trunk-jpl/configs/config-linux64-astrid-mpich1.0.sh (added) * issm/trunk-jpl/configs/config-linux64-astrid-mpich1.4.sh (deleted) * issm/trunk-jpl/configs/config-linux64-astrid.sh (modified) Changing mpich version Wed, 25 Apr 2012 19:48:00 GMT Eric.Larour [12144] * issm/trunk-jpl/externalpackages/libpng (added) * issm/trunk-jpl/externalpackages/libpng/install.sh (added) * issm/trunk-jpl/externalpackages/libpng/libpng-1.5.10.tar.gz (added) python libpng package Wed, 25 Apr 2012 19:46:24 GMT Eric.Larour [12143] * issm/trunk-jpl/externalpackages/matplotlib (added) * issm/trunk-jpl/externalpackages/matplotlib/install.sh (added) matplotlib python package Wed, 25 Apr 2012 19:45:22 GMT Eric.Larour [12142] * issm/trunk-jpl/externalpackages/triangle (modified) Ignoring install directories Wed, 25 Apr 2012 19:44:59 GMT Eric.Larour [12141] * issm/trunk-jpl/externalpackages/readline (added) * issm/trunk-jpl/externalpackages/readline/install.sh (added) * issm/trunk-jpl/externalpackages/readline/readline-6.2.2.tar.gz (added) readline python package Wed, 25 Apr 2012 19:44:21 GMT Eric.Larour [12140] * issm/trunk-jpl/externalpackages/pyclips (modified) Ignoring install directory Wed, 25 Apr 2012 19:44:03 GMT Eric.Larour [12139] * issm/trunk-jpl/externalpackages/pyclips (added) * issm/trunk-jpl/externalpackages/pyclips/install.sh (added) * issm/trunk-jpl/externalpackages/pyclips/pyclips-1.0.7.348.tar.gz (added) py clips package Wed, 25 Apr 2012 19:43:25 GMT Eric.Larour [12138] * issm/trunk-jpl/externalpackages/libermate (modified) Ignoring install directory Wed, 25 Apr 2012 19:43:10 GMT Eric.Larour [12137] * issm/trunk-jpl/externalpackages/libermate (added) * issm/trunk-jpl/externalpackages/libermate/install.sh (added) * issm/trunk-jpl/externalpackages/libermate/libermate-0.4.tgz (added) matlab to python scripts Wed, 25 Apr 2012 19:42:40 GMT Eric.Larour [12136] * issm/trunk-jpl/externalpackages/ipython (added) * issm/trunk-jpl/externalpackages/ipython/install.sh (added) * issm/trunk-jpl/externalpackages/ipython/ipython-0.12.tar.gz (added) ipython package Wed, 25 Apr 2012 19:41:35 GMT Eric.Larour [12135] * issm/trunk-jpl/externalpackages/distribute (added) * issm/trunk-jpl/externalpackages/distribute/distribute-0.6.26.tar.gz (added) * issm/trunk-jpl/externalpackages/distribute/install.sh (added) distribute package for installing python packages in 3.2.2 Wed, 25 Apr 2012 19:40:47 GMT Eric.Larour [12134] * issm/trunk-jpl/externalpackages/nose (modified) * issm/trunk-jpl/externalpackages/nose/nose-1.1.2.tar.gz (added) nose package Wed, 25 Apr 2012 19:38:41 GMT Eric.Larour [12133] * issm/trunk-jpl/externalpackages/scipy (modified) Ignoring some svn files Wed, 25 Apr 2012 19:38:12 GMT Eric.Larour [12132] * issm/trunk-jpl/externalpackages/freetype (modified) Ignoring src and install for svn Wed, 25 Apr 2012 19:37:55 GMT Eric.Larour [12131] * issm/trunk-jpl/externalpackages/freetype (added) * issm/trunk-jpl/externalpackages/freetype/freetype-2.4.9.tar.gz (added) * issm/trunk-jpl/externalpackages/freetype/install.sh (added) Freetype package Wed, 25 Apr 2012 19:07:12 GMT glperez [12130] * issm/trunk-jpl/configs/config-arm-linux.sh (modified) * issm/trunk-jpl/externalpackages/android/android-sdk/install.sh (modified) Minor modification to config-arm-linux.sh Wed, 25 Apr 2012 17:02:43 GMT glperez [12129] * issm/trunk-jpl/configs/config-arm-linux.sh (moved) * issm/trunk-jpl/externalpackages/triangle/triangle.c.patch.python (modified) Minor modification to Triangle.c python patch and the arm-linux ... Wed, 25 Apr 2012 16:59:22 GMT Eric.Larour [12128] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/toolkits/python/pythonincludes.h (modified) Folded NPY_DEPRECATED python stuff into pythonincludes header file Wed, 25 Apr 2012 16:36:49 GMT Eric.Larour [12127] * issm/trunk-jpl/src/c/modules/ContourToMeshx/ContourToMeshx.cpp (modified) * issm/trunk-jpl/src/c/modules/ContourToMeshx/ContourToMeshx.h (modified) * issm/trunk-jpl/src/c/modules/ContourToMeshx/ContourToMeshxt.cpp (modified) * issm/trunk-jpl/src/m/utils/BC/SetIceShelfBC.py (added) * issm/trunk-jpl/src/modules/ContourToMesh/ContourToMesh.cpp (modified) * issm/trunk-jpl/src/modules/ContourToMesh/ContourToMesh.h (modified) Starting conversion of SetIceShelfBC Needs ContourToMesh python ... Wed, 25 Apr 2012 16:18:43 GMT Eric.Larour [12126] * issm/trunk-jpl/src/m/utils/Meca/paterson.py (added) Converted paterson.m to paterson.py Wed, 25 Apr 2012 16:18:20 GMT Eric.Larour [12125] * issm/trunk-jpl/src/m/model/mesh/triangle.py (modified) Bug fix. Wed, 25 Apr 2012 16:17:55 GMT Eric.Larour [12124] * issm/trunk-jpl/test/Par/SquareShelfConstrained.py (modified) Almost finished translated to python Wed, 25 Apr 2012 16:17:29 GMT Eric.Larour [12123] * issm/trunk-jpl/src/m/classes/autodiff.py (modified) * issm/trunk-jpl/src/m/classes/balancethickness.py (modified) * issm/trunk-jpl/src/m/classes/basalforcings.py (modified) * issm/trunk-jpl/src/m/classes/constants.py (modified) * issm/trunk-jpl/src/m/classes/debug.py (modified) * issm/trunk-jpl/src/m/classes/diagnostic.py (modified) * issm/trunk-jpl/src/m/classes/flowequation.py (modified) * issm/trunk-jpl/src/m/classes/friction.py (modified) * issm/trunk-jpl/src/m/classes/geometry.py (modified) * issm/trunk-jpl/src/m/classes/groundingline.py (modified) * issm/trunk-jpl/src/m/classes/hydrology.py (modified) * issm/trunk-jpl/src/m/classes/initialization.py (modified) * issm/trunk-jpl/src/m/classes/inversion.py (modified) * issm/trunk-jpl/src/m/classes/mask.py (modified) * issm/trunk-jpl/src/m/classes/materials.py (modified) * issm/trunk-jpl/src/m/classes/mesh.py (modified) * issm/trunk-jpl/src/m/classes/miscellaneous.py (modified) * issm/trunk-jpl/src/m/classes/private.py (modified) * issm/trunk-jpl/src/m/classes/prognostic.py (modified) * issm/trunk-jpl/src/m/classes/qmu.py (modified) * issm/trunk-jpl/src/m/classes/radaroverlay.py (modified) * issm/trunk-jpl/src/m/classes/rifts.py (modified) * issm/trunk-jpl/src/m/classes/settings.py (modified) * issm/trunk-jpl/src/m/classes/steadystate.py (modified) * issm/trunk-jpl/src/m/classes/surfaceforcings.py (modified) * issm/trunk-jpl/src/m/classes/thermal.py (modified) * issm/trunk-jpl/src/m/classes/timestepping.py (modified) * issm/trunk-jpl/src/m/classes/transient.py (modified) Added setdefaultparameters routines to python classes Wed, 25 Apr 2012 04:48:49 GMT Eric.Larour [12122] * issm/trunk-jpl/test/NightlyRun/test102.py (modified) * issm/trunk-jpl/test/Par/SquareShelfConstrained.py (added) Converting SquareShelfConstrained.par to SquareShelfConstrained.py ... Wed, 25 Apr 2012 04:45:58 GMT Eric.Larour [12121] * issm/trunk-jpl/src/c/modules/ContourToNodesx/ContourToNodesx.cpp (modified) * issm/trunk-jpl/src/c/modules/ContourToNodesx/ContourToNodesx.h (modified) * issm/trunk-jpl/src/c/modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.cpp (modified) * issm/trunk-jpl/src/c/modules/InterpFromMeshToMesh2dx/InterpFromMeshToMesh2dx.h (modified) Added new ContourToNodesx prototype to handle same functionality, but ... Wed, 25 Apr 2012 04:44:26 GMT Eric.Larour [12120] * issm/trunk-jpl/src/c/python/io/FetchPythonData.cpp (modified) * issm/trunk-jpl/src/c/python/io/pythonio.h (modified) Added fetch data capability for double* vector Wed, 25 Apr 2012 04:44:05 GMT Eric.Larour [12119] * issm/trunk-jpl/src/c/python/include/python_macros.h (modified) Added nrhs as input argument for all python modules to access Wed, 25 Apr 2012 04:43:39 GMT Eric.Larour [12118] * issm/trunk-jpl/src/modules/InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.cpp (modified) * issm/trunk-jpl/src/modules/InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.h (modified) * issm/trunk-jpl/src/modules/python/Makefile.am (modified) Adapted InterpFromMeshToMesh2d to python Wed, 25 Apr 2012 04:42:26 GMT Eric.Larour [12117] * issm/trunk-jpl/src/m/classes/materials.py (modified) Added defaults for materials class Wed, 25 Apr 2012 04:42:08 GMT Eric.Larour [12116] * issm/trunk-jpl/src/m/model/mesh/triangle.py (modified) Indexing bug Wed, 25 Apr 2012 01:23:23 GMT glperez [12115] * issm/trunk-jpl/externalpackages/gsl/install-android-4.0.sh (added) * issm/trunk-jpl/externalpackages/triangle/configs/android/android-4.0/configure.make (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) Created the install script for GSL to cross-compile for arm-linux- ... Tue, 24 Apr 2012 15:55:05 GMT Eric.Larour [12114] * issm (modified) ignore publications Tue, 24 Apr 2012 15:45:25 GMT Eric.Larour [12113] * issm/trunk-jpl/src/m/classes/model.py (modified) * issm/trunk-jpl/src/m/model/addnote.py (added) * issm/trunk-jpl/src/m/model/parameterization/parameterize.py (added) * issm/trunk-jpl/test/NightlyRun/test102.py (modified) Implemented parameterize routine in python Tue, 24 Apr 2012 06:04:27 GMT Eric.Larour [12112] * issm/trunk-jpl/configs/config-macosx64-larour-nopetsc.sh (modified) * issm/trunk-jpl/src/c/python/io/FetchPythonData.cpp (modified) * issm/trunk-jpl/src/c/python/io/WritePythonData.cpp (modified) * issm/trunk-jpl/src/c/python/io/pythonio.h (modified) * issm/trunk-jpl/src/m/model/mesh (modified) * issm/trunk-jpl/src/m/model/mesh/triangle.py (modified) * issm/trunk-jpl/src/m/model/setmask.py (added) * issm/trunk-jpl/src/m/utils/Geometry/FlagElements.py (added) * issm/trunk-jpl/src/modules/ElementConnectivity/ElementConnectivity.cpp (modified) * issm/trunk-jpl/src/modules/ElementConnectivity/ElementConnectivity.h (modified) * issm/trunk-jpl/src/modules/NodeConnectivity/NodeConnectivity.cpp (modified) * issm/trunk-jpl/src/modules/NodeConnectivity/NodeConnectivity.h (modified) * issm/trunk-jpl/src/modules/TriMesh/TriMesh.cpp (modified) * issm/trunk-jpl/src/modules/python/Makefile.am (modified) * issm/trunk-jpl/startup.py (modified) * issm/trunk-jpl/test/NightlyRun/test102.py (modified) Finished python version of setmask.py and FlagElements.py Also ... Tue, 24 Apr 2012 01:19:45 GMT Eric.Larour [12111] * issm/trunk-jpl/test/NightlyRun/test102.py (moved) Moving to 102 Tue, 24 Apr 2012 01:19:32 GMT Eric.Larour [12110] * issm/trunk-jpl/test/NightlyRun/test101.py (modified) triangle now working completely in python Mon, 23 Apr 2012 21:57:09 GMT Mathieu Morlighem [12109] * issm/trunk-jpl/src/c/Container/Nodes.cpp (modified) Fixed bug introduced while stripping MPI Mon, 23 Apr 2012 21:37:14 GMT Eric.Larour [12108] * issm/trunk-jpl/src/c/Container/Nodes.cpp (modified) Bug in MPI_Gather Mon, 23 Apr 2012 18:21:18 GMT habbalf [12107] * issm/trunk-jpl/externalpackages/petsc/install-dev-linux64.sh (modified) Added spai install Mon, 23 Apr 2012 18:03:24 GMT habbalf [12106] * issm/trunk-jpl/src/c/toolkits/petsc/patches/NewMat.cpp (modified) Create dense matrix if sparsity=1 Mon, 23 Apr 2012 18:03:05 GMT habbalf [12105] * issm/trunk-jpl/src/c/objects/Numerics/Matrix.cpp (modified) oops, wrong file Mon, 23 Apr 2012 18:01:38 GMT habbalf [12104] * issm/trunk-jpl/src/c/objects/Numerics/Matrix.cpp (modified) Create dense matrix if sparsity=1 Sat, 21 Apr 2012 02:13:33 GMT Eric.Larour [12103] * issm/trunk-jpl/configs/config-arm.sh (modified) Arm processor configuration Sat, 21 Apr 2012 02:07:47 GMT Eric.Larour [12102] * issm/trunk-jpl/configs/config-macosx64-larour-nopetsc.sh (modified) * issm/trunk-jpl/externalpackages/nose/install-macosx64sh (modified) * issm/trunk-jpl/externalpackages/scipy/install-macosx64.sh (modified) * issm/trunk-jpl/m4/issm_options.m4 (modified) * issm/trunk-jpl/src/Makefile.am (modified) * issm/trunk-jpl/src/c/Container/Constraints.cpp (modified) * issm/trunk-jpl/src/c/Container/Elements.cpp (modified) * issm/trunk-jpl/src/c/Container/Loads.cpp (modified) * issm/trunk-jpl/src/c/Container/Nodes.cpp (modified) * issm/trunk-jpl/src/c/Container/Vertices.cpp (modified) * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/matlab/io/PetscMatrixToDoubleMatrix.cpp (deleted) * issm/trunk-jpl/src/c/matlab/io/PetscVectorToDoubleVector.cpp (deleted) * issm/trunk-jpl/src/c/matlab/io/WriteMatlabData.cpp (modified) * issm/trunk-jpl/src/c/matlab/io/matlabio.h (modified) * issm/trunk-jpl/src/c/modules/ConstraintsStatex/RiftConstraintsState.cpp (modified) * issm/trunk-jpl/src/c/modules/ConstraintsStatex/ThermalConstraintsState.cpp (modified) * issm/trunk-jpl/src/c/modules/ConstraintsStatex/ThermalIsPresent.cpp (modified) * issm/trunk-jpl/src/c/modules/DragCoefficientAbsGradientx/DragCoefficientAbsGradientx.cpp (modified) * issm/trunk-jpl/src/c/modules/ElementResponsex/ElementResponsex.cpp (modified) * issm/trunk-jpl/src/c/modules/GroundinglineMigrationx/GroundinglineMigrationx.cpp (modified) * issm/trunk-jpl/src/c/modules/IceVolumex/IceVolumex.cpp (modified) * issm/trunk-jpl/src/c/modules/InputConvergencex/InputConvergencex.cpp (modified) * issm/trunk-jpl/src/c/modules/MassFluxx/MassFluxx.cpp (modified) * issm/trunk-jpl/src/c/modules/MaxAbsVxx/MaxAbsVxx.cpp (modified) * issm/trunk-jpl/src/c/modules/MaxAbsVyx/MaxAbsVyx.cpp (modified) * issm/trunk-jpl/src/c/modules/MaxAbsVzx/MaxAbsVzx.cpp (modified) * issm/trunk-jpl/src/c/modules/MaxVelx/MaxVelx.cpp (modified) * issm/trunk-jpl/src/c/modules/MaxVxx/MaxVxx.cpp (modified) * issm/trunk-jpl/src/c/modules/MaxVyx/MaxVyx.cpp (modified) * issm/trunk-jpl/src/c/modules/MaxVzx/MaxVzx.cpp (modified) * issm/trunk-jpl/src/c/modules/MeshPartitionx/MeshPartitionx.cpp (modified) * issm/trunk-jpl/src/c/modules/MinVelx/MinVelx.cpp (modified) * issm/trunk-jpl/src/c/modules/MinVxx/MinVxx.cpp (modified) * issm/trunk-jpl/src/c/modules/MinVyx/MinVyx.cpp (modified) * issm/trunk-jpl/src/c/modules/MinVzx/MinVzx.cpp (modified) * issm/trunk-jpl/src/c/modules/NodalValuex/NodalValuex.cpp (modified) * issm/trunk-jpl/src/c/modules/ParsePetscOptionsx/ParsePetscOptionsx.cpp (modified) * issm/trunk-jpl/src/c/modules/RheologyBbarAbsGradientx/RheologyBbarAbsGradientx.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceAbsVelMisfitx/SurfaceAbsVelMisfitx.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceAreax/SurfaceAreax.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceAverageVelMisfitx/SurfaceAverageVelMisfitx.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceLogVelMisfitx/SurfaceLogVelMisfitx.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceLogVxVyMisfitx/SurfaceLogVxVyMisfitx.cpp (modified) * issm/trunk-jpl/src/c/modules/SurfaceRelVelMisfitx/SurfaceRelVelMisfitx.cpp (modified) * issm/trunk-jpl/src/c/modules/ThicknessAbsGradientx/ThicknessAbsGradientx.cpp (modified) * issm/trunk-jpl/src/c/modules/ThicknessAbsMisfitx/ThicknessAbsMisfitx.cpp (modified) * issm/trunk-jpl/src/c/modules/TimeAdaptx/TimeAdaptx.cpp (modified) * issm/trunk-jpl/src/c/objects/Bamg/Metric.h (modified) * issm/trunk-jpl/src/c/objects/IoModel.cpp (modified) * issm/trunk-jpl/src/c/objects/Patch.cpp (modified) * issm/trunk-jpl/src/c/solutions/issm.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/PetscMatrixToDoubleMatrix.cpp (modified) * issm/trunk-jpl/src/c/toolkits/petsc/patches/PetscVectorToDoubleVector.cpp (modified) * issm/trunk-jpl/src/c/toolkits/toolkits.h (modified) * issm/trunk-jpl/src/m/model/mesh/triangle.py (added) * issm/trunk-jpl/startup.py (modified) * issm/trunk-jpl/test/NightlyRun/test101.py (modified) Stripped out the following layers: METIS: if not running with MPI, ... Sat, 21 Apr 2012 01:22:48 GMT Eric.Larour [12101] * issm/trunk-jpl/src/c/toolkits/petsc/patches/PetscMatrixToDoubleMatrix.cpp (added) * issm/trunk-jpl/src/c/toolkits/petsc/patches/PetscVectorToDoubleVector.cpp (added) * issm/trunk-jpl/src/c/toolkits/petsc/patches/petscpatches.h (modified) Relocation from matlab to petsc patches Sat, 21 Apr 2012 00:44:23 GMT seroussi [12100] * issm/trunk-jpl/test/NightlyRun/test448.m (modified) * issm/trunk-jpl/test/NightlyRun/test450.m (modified) * issm/trunk-jpl/test/NightlyRun/test452.m (modified) no more serial solution Fri, 20 Apr 2012 22:55:26 GMT Mathieu Morlighem [12099] * issm/trunk-jpl/src/dox/issm.dox (modified) updated code stats Fri, 20 Apr 2012 22:44:32 GMT Mathieu Morlighem [12098] * issm/trunk-jpl/src/c/modules/Exp2Kmlx/Exp2Kmlx.cpp (modified) * issm/trunk-jpl/src/c/modules/TriMeshx/TriMeshx.cpp (modified) * issm/trunk-jpl/src/c/shared/Exp/DomainOutlineRead.cpp (modified) * issm/trunk-jpl/src/c/shared/Exp/DomainOutlineWrite.cpp (modified) * issm/trunk-jpl/src/c/shared/Exp/exp.h (modified) * issm/trunk-jpl/src/modules/TriMesh/TriMesh.cpp (modified) Removed 'whole' option of DomainOutlineRead (missleading) Fri, 20 Apr 2012 22:33:08 GMT glperez [12097] * issm/trunk-jpl/etc/environment.sh (modified) * issm/trunk-jpl/etc/environment_variables.sh (modified) * issm/trunk-jpl/externalpackages/android (added) * issm/trunk-jpl/externalpackages/android-dev-dir (deleted) * issm/trunk-jpl/externalpackages/android/android-emulators (copied) * issm/trunk-jpl/externalpackages/android/android-ndk (moved) * issm/trunk-jpl/externalpackages/android/android-ndk/install.sh (modified) * issm/trunk-jpl/externalpackages/android/android-sdk (moved) * issm/trunk-jpl/externalpackages/android/android-sdk/install.sh (modified) Modification to environment variables and file strucutre of Android. Fri, 20 Apr 2012 22:08:29 GMT Mathieu Morlighem [12096] * issm/trunk-jpl/src/c/modules/modules.h (modified) minor Fri, 20 Apr 2012 22:06:58 GMT Mathieu Morlighem [12095] * issm/trunk-jpl/src/c/modules/TriMeshRiftsx (deleted) not needed anymore Fri, 20 Apr 2012 22:03:00 GMT Mathieu Morlighem [12094] * issm/trunk-jpl/src/m/model/mesh/triangle.m (modified) Merging TriMesh and TriMeshRifts Fri, 20 Apr 2012 22:02:46 GMT Mathieu Morlighem [12093] * issm/trunk-jpl/src/c/Makefile.am (modified) * issm/trunk-jpl/src/c/modules/TriMeshRiftsx/TriMeshRiftsx.cpp (modified) * issm/trunk-jpl/src/c/modules/TriMeshRiftsx/TriMeshRiftsx.h (modified) * issm/trunk-jpl/src/c/modules/TriMeshx/TriMeshx.cpp (modified) * issm/trunk-jpl/src/c/modules/TriMeshx/TriMeshx.h (modified) * issm/trunk-jpl/src/c/shared/Exp/DomainOutlineRead.cpp (modified) * issm/trunk-jpl/src/modules/TriMesh/TriMesh.cpp (modified) * issm/trunk-jpl/src/modules/TriMesh/TriMesh.h (modified) * issm/trunk-jpl/src/modules/TriMeshRifts (deleted) * issm/trunk-jpl/src/modules/matlab/Makefile.am (modified) Merging TriMesh and TriMeshRifts Fri, 20 Apr 2012 21:51:57 GMT Mathieu Morlighem [12092] * issm/trunk-jpl/m4/issm_options.m4 (modified) commenting comments Fri, 20 Apr 2012 21:43:35 GMT Eric.Larour [12091] * issm/trunk-jpl/configs/config-arm.sh (added) ARM processors configuration file Fri, 20 Apr 2012 21:39:32 GMT Mathieu Morlighem [12090] * issm/trunk-jpl/src/modules/TriMeshNoDensity (deleted) * issm/trunk-jpl/src/modules/TriMeshRefine (deleted) * issm/trunk-jpl/src/modules/matlab/Makefile.am (modified) Removed 2 modules never used Fri, 20 Apr 2012 21:38:33 GMT Mathieu Morlighem [12089] * issm/trunk-jpl/src/m/model/plot/applyoptions.m (modified) * issm/trunk-jpl/src/m/model/plot/plot_gridded.m (modified) reverted: to be implemented by Chris Fri, 20 Apr 2012 21:37:15 GMT Mathieu Morlighem [12088] * issm/trunk-jpl/src/m/model/collapse.m (modified) * issm/trunk-jpl/src/m/model/mesh/meshnodensity.m (deleted) * issm/trunk-jpl/src/m/model/mesh/meshrefine.m (deleted) * issm/trunk-jpl/src/m/model/plot/applyoptions.m (modified) * issm/trunk-jpl/src/m/model/plot/plot_gridded.m (modified) * issm/trunk-jpl/src/m/utils/Exp/exptool.m (modified) never used (that's 2 modules less) Fri, 20 Apr 2012 21:29:49 GMT schlegel [12087] * issm/trunk-jpl/src/m/model/plot/plot_overlay.m (modified) redblue is flipped in overlay Fri, 20 Apr 2012 21:27:30 GMT Mathieu Morlighem [12086] * issm/trunk-jpl/src/c/shared/TriMesh/SplitMeshForRifts.cpp (modified) * issm/trunk-jpl/src/c/shared/TriMesh/TriMeshUtils.cpp (modified) Fixed checks Fri, 20 Apr 2012 21:27:19 GMT Mathieu Morlighem [12085] * issm/trunk-jpl/src/modules/TriMeshProcessRifts/TriMeshProcessRifts.cpp (modified) Fixed WriteData Fri, 20 Apr 2012 21:21:35 GMT Eric.Larour [12084] * issm/trunk-jpl/externalpackages/android-ndk/install.sh (modified) Minor bug Fri, 20 Apr 2012 21:07:05 GMT Eric.Larour [12083] * issm/trunk-jpl/externalpackages/android-sdk/install.sh (modified) Minor bug Fri, 20 Apr 2012 20:51:50 GMT Mathieu Morlighem [12082] * issm/trunk-jpl/src/m/model/mesh/triangle.m (modified) converting to 'order' to bollean Fri, 20 Apr 2012 20:49:44 GMT Mathieu Morlighem [12081] * issm/trunk-jpl/src/modules/TriMeshProcessRifts/TriMeshProcessRifts.cpp (modified) Reorganizing and adding assertion for safety Fri, 20 Apr 2012 20:49:38 GMT Mathieu Morlighem [12080] * issm/trunk-jpl/src/c/shared/TriMesh/SplitMeshForRifts.cpp (modified) * issm/trunk-jpl/src/c/shared/TriMesh/TriMeshUtils.cpp (modified) * issm/trunk-jpl/src/c/shared/TriMesh/trimesh.h (modified) Reorganizing and adding assertion for safety Fri, 20 Apr 2012 20:49:13 GMT Mathieu Morlighem [12079] * issm/trunk-jpl/src/c/shared/Exceptions/exceptions.h (modified) revert to private properties Fri, 20 Apr 2012 20:46:58 GMT Mathieu Morlighem [12078] * issm/trunk-jpl/src/c/include/macros.h (modified) * issm/trunk-jpl/src/c/matlab/include/matlab_macros.h (modified) * issm/trunk-jpl/src/c/shared/Exceptions/Exceptions.cpp (modified) * issm/trunk-jpl/src/c/shared/Exceptions/exceptions.h (modified) Better error handling for matlab modules Fri, 20 Apr 2012 15:47:39 GMT Eric.Larour [12077] * issm/trunk-jpl/src/py/model/petscversion.py (deleted) Superseded by petscversion.2.py Fri, 20 Apr 2012 15:43:42 GMT Eric.Larour [12076] * issm/trunk-jpl/configure.ac (modified) Prototype handling of 2.7 vs 3.2 versions of PYTHON scripts Fri, 20 Apr 2012 15:43:11 GMT Eric.Larour [12075] * issm/trunk-jpl/src/Makefile.am (modified) * issm/trunk-jpl/src/modules/python/Makefile.am (modified) * issm/trunk-jpl/src/py (modified) * issm/trunk-jpl/src/py/Makefile.am (added) * issm/trunk-jpl/src/py/model (modified) * issm/trunk-jpl/src/py/model/Makefile.am (added) * issm/trunk-jpl/src/py/model/petscversion.2.py (added) Handle version 2 vs 3 for python scripts. Prototype. Fri, 20 Apr 2012 15:42:01 GMT Eric.Larour [12074] * issm/trunk-jpl/src/c/Makefile.am (modified) Need to better handle NPY_DEPREACATED_APY between 2.7 and 3.2 PYTHON ... Fri, 20 Apr 2012 15:41:10 GMT Eric.Larour [12073] * issm/trunk-jpl/src/c/python/include/python_macros.h (modified) * issm/trunk-jpl/src/c/python/io/FetchPythonData.cpp (modified) Adapted PYTHON 3.2 API to PYTHON 2.7 API. Fri, 20 Apr 2012 15:39:58 GMT Eric.Larour [12072] * issm/trunk-jpl/m4/issm_options.m4 (modified) Better handling of python versions Fri, 20 Apr 2012 15:39:29 GMT Mathieu Morlighem [12071] * issm/trunk-jpl/src/modules/TriMeshProcessRifts/TriMeshProcessRifts.cpp (modified) * issm/trunk-jpl/src/modules/TriMeshRifts/TriMeshRifts.cpp (modified) * issm/trunk-jpl/src/modules/TriMeshRifts/TriMeshRifts.h (modified) Improved TriMeshRifts, to be merged to TriMesh Fri, 20 Apr 2012 15:39:09 GMT Mathieu Morlighem [12070] * issm/trunk-jpl/src/c/shared/TriMesh/TriMeshUtils.cpp (modified) * issm/trunk-jpl/src/c/shared/TriMesh/trimesh.h (modified) Added assertion in meshprocessrifts for safety Fri, 20 Apr 2012 15:10:56 GMT Eric.Larour [12069] * issm/trunk-jpl/src/c/python/objects (deleted) not needed anymore Fri, 20 Apr 2012 15:10:13 GMT Mathieu Morlighem [12068] * issm/trunk-jpl/src/modules/Chaco/Chaco.cpp (modified) Fixed OLD segfault in Chaco Fri, 20 Apr 2012 14:49:58 GMT Eric.Larour [12067] * issm/trunk-jpl/configs/config-macosx64-larour-bothapis.sh (modified) Better configuration file, with python version dependency Fri, 20 Apr 2012 14:49:33 GMT Eric.Larour [12066] * issm/trunk-jpl/startup.py (modified) Allow python 2 as wrapper