MATLAB_PATH=$(cygpath -u $(cygpath -ms "/c/Program Files/MATLAB/R2019b")) ISSM_CONFIG='\ --prefix=${ISSM_DIR} \ --enable-development \ --enable-debugging \ --with-numthreads=4 \ --with-vendor="win-msys2" \ --with-matlab-dir="${MATLAB_PATH}" \ --with-mpi-include="${MSMPI_ROOT}/include" \ --with-mpi-libdir="-Wl,-L${MSMPI_ROOT}/lib" \ --with-mpi-libflags="-Wl,-lmsmpi" \ --with-fortran-lib="-Wl,-L/c/msys64/mingw64/lib/gcc/x86_64-w64-mingw32/13.2.0 -Wl,-lgfortran" \ --with-metis-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-parmetis-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-blas-lapack-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-scalapack-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-mumps-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-petsc-dir="${ISSM_DIR}/externalpackages/petsc/install" \ --with-triangle-dir="${ISSM_DIR}/externalpackages/triangle/install" \ --with-chaco-dir="${ISSM_DIR}/externalpackages/chaco/install" \ --with-m1qn3-dir="${ISSM_DIR}/externalpackages/m1qn3/install" \ --with-semic-dir="${ISSM_DIR}/externalpackages/semic/install" \ ' #-------------------# # External Packages # #-------------------# #List of external packages to be installed and their installation scripts EXTERNALPACKAGES=" msmpi install.sh petsc install-3.14-win-msys2-mingw-msmpi.sh triangle install-win-msys2-mingw.sh chaco install-win-msys2-mingw.sh m1qn3 install.sh semic install.sh shell2junit install.sh " #---------# # Testing # #---------# # Test suites MATLAB_TEST=1 PYTHON_TEST=0 JAVASCRIPT_TEST=0 EXAMPLES_TEST=0 # Number of CPUs used in ISSM compilation # # NOTE: One is usually safer as some packages are very sensitive to parallel # compilation # NUMCPUS_INSTALL=4 # Number of CPUs used in the nightly runs NUMCPUS_RUN=2 # Nightly run options # # See documentation in test/NightlyRun/runme.* for more information # # NOTE: # - Tests 125, 126, and 129 are skipped because restart is not yet implemented # for Windows (under MSYS2) # - test701 is skipped because it uses full Stokes equations # MATLAB_NROPTIONS="'exclude',[IdFromString('Dakota'),125,126,129,435,701,702,703]" PYTHON_NROPTIONS=""