Index: /u/astrid-r1b/morlighe/issmuci/trunk-jpl/../trunk-jpl/src/modules/matlab/Makefile.am
===================================================================
--- /u/astrid-r1b/morlighe/issmuci/trunk-jpl/../trunk-jpl/src/modules/matlab/Makefile.am	(revision 13087)
+++ /u/astrid-r1b/morlighe/issmuci/trunk-jpl/../trunk-jpl/src/modules/matlab/Makefile.am	(revision 13088)
@@ -4,41 +4,41 @@
 
 #Modules {{{1
 if MODULES
-lib_LTLIBRARIES =  AverageFilter.la
-#			       BamgMesher.la\
-#				   BamgConvertMesh.la\
-#				   BamgTriangulate.la\
-#				   ContourToMesh.la\
-#				   ContourToNodes.la\
-#				   ElementConnectivity.la\
-#				   EnumToString.la\
-#				   Exp2Kml.la\
-#				   HoleFiller.la\
-#				   InternalFront.la\
-#				   InterpFromGridToMesh.la\
-#				   InterpFromMeshToMesh2d.la\
-#				   InterpFromMeshToMesh3d.la\
-#				   InterpFromMeshToGrid.la\
-#				   InterpFromMesh2d.la\
-#				   KMLFileRead.la\
-#				   KMLMeshWrite.la\
-#				   KMLOverlay.la\
-#				   Kml2Exp.la\
-#				   Kriging.la\
-#				   Ll2xy.la\
-#				   NodeConnectivity.la\
-#				   MeshPartition.la\
-#				   MeshProfileIntersection.la\
-#				   PointCloudFindNeighbors.la\
-#				   PropagateFlagsFromConnectivity.la\
-#				   Shp2Kml.la\
-#				   StringToEnum.la\
-#				   TriaSearch.la\
-#				   TriMesh.la\
-#				   TriMeshProcessRifts.la\
-#				   Scotch.la\
-#				   Xy2ll.la\
-#                  Chaco.la
+lib_LTLIBRARIES =  AverageFilter.la\
+			       BamgMesher.la\
+				   BamgConvertMesh.la\
+				   BamgTriangulate.la\
+				   ContourToMesh.la\
+				   ContourToNodes.la\
+				   ElementConnectivity.la\
+				   EnumToString.la\
+				   Exp2Kml.la\
+				   HoleFiller.la\
+				   InternalFront.la\
+				   InterpFromGridToMesh.la\
+				   InterpFromMeshToMesh2d.la\
+				   InterpFromMeshToMesh3d.la\
+				   InterpFromMeshToGrid.la\
+				   InterpFromMesh2d.la\
+				   KMLFileRead.la\
+				   KMLMeshWrite.la\
+				   KMLOverlay.la\
+				   Kml2Exp.la\
+				   Kriging.la\
+				   Ll2xy.la\
+				   NodeConnectivity.la\
+				   MeshPartition.la\
+				   MeshProfileIntersection.la\
+				   PointCloudFindNeighbors.la\
+				   PropagateFlagsFromConnectivity.la\
+				   Shp2Kml.la\
+				   StringToEnum.la\
+				   TriaSearch.la\
+				   TriMesh.la\
+				   TriMeshProcessRifts.la\
+				   Scotch.la\
+				   Xy2ll.la\
+                   Chaco.la
 endif 
 #}}}
 #Flags and libraries {{{1
@@ -90,145 +90,143 @@
 #}}}
 
 #Bin sources {{{1
-echo "WHAT IS MUMPS: " $(MUMPSLIB)
-echo "WHAT IS MPI  : " $(MPILIB)
 AverageFilter_la_SOURCES = ../AverageFilter/AverageFilter.cpp\
 			  ../AverageFilter/AverageFilter.h
-AverageFilter_la_LIBADD = ${deps} $(PETSCLIB) $(MUMPSLIB) $(MPILIB) $(FLIBS) $(FORTRANLIB) $(METISLIB) $(MULTITHREADINGLIB)
+AverageFilter_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#BamgMesher_la_SOURCES = ../BamgMesher/BamgMesher.cpp\
-#					../BamgMesher/BamgMesher.h
-#BamgMesher_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+BamgMesher_la_SOURCES = ../BamgMesher/BamgMesher.cpp\
+					../BamgMesher/BamgMesher.h
+BamgMesher_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#BamgConvertMesh_la_SOURCES = ../BamgConvertMesh/BamgConvertMesh.cpp\
-#					../BamgConvertMesh/BamgConvertMesh.h
-#BamgConvertMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+BamgConvertMesh_la_SOURCES = ../BamgConvertMesh/BamgConvertMesh.cpp\
+					../BamgConvertMesh/BamgConvertMesh.h
+BamgConvertMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#BamgTriangulate_la_SOURCES = ../BamgTriangulate/BamgTriangulate.cpp\
-#								  ../BamgTriangulate/BamgTriangulate.h
-#BamgTriangulate_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+BamgTriangulate_la_SOURCES = ../BamgTriangulate/BamgTriangulate.cpp\
+								  ../BamgTriangulate/BamgTriangulate.h
+BamgTriangulate_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#Chaco_la_SOURCES = ../Chaco/Chaco.cpp\
-#					../Chaco/Chaco.h
-#Chaco_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(CHACOLIB)
+Chaco_la_SOURCES = ../Chaco/Chaco.cpp\
+					../Chaco/Chaco.h
+Chaco_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(CHACOLIB)
 
-#ContourToMesh_la_SOURCES = ../ContourToMesh/ContourToMesh.cpp\
-#			               ../ContourToMesh/ContourToMesh.h
-#ContourToMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
+ContourToMesh_la_SOURCES = ../ContourToMesh/ContourToMesh.cpp\
+			               ../ContourToMesh/ContourToMesh.h
+ContourToMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
 
-#ContourToNodes_la_SOURCES = ../ContourToNodes/ContourToNodes.cpp\
-#			  ../ContourToNodes/ContourToNodes.h
-#ContourToNodes_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+ContourToNodes_la_SOURCES = ../ContourToNodes/ContourToNodes.cpp\
+			  ../ContourToNodes/ContourToNodes.h
+ContourToNodes_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#ElementConnectivity_la_SOURCES = ../ElementConnectivity/ElementConnectivity.cpp\
-#			  ../ElementConnectivity/ElementConnectivity.h
-#ElementConnectivity_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+ElementConnectivity_la_SOURCES = ../ElementConnectivity/ElementConnectivity.cpp\
+			  ../ElementConnectivity/ElementConnectivity.h
+ElementConnectivity_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#EnumToString_la_SOURCES = ../EnumToString/EnumToString.cpp\
-#			  ../EnumToString/EnumToString.h
-#EnumToString_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+EnumToString_la_SOURCES = ../EnumToString/EnumToString.cpp\
+			  ../EnumToString/EnumToString.h
+EnumToString_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#StringToEnum_la_SOURCES = ../StringToEnum/StringToEnum.cpp\
-#			  ../StringToEnum/StringToEnum.h
-#StringToEnum_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+StringToEnum_la_SOURCES = ../StringToEnum/StringToEnum.cpp\
+			  ../StringToEnum/StringToEnum.h
+StringToEnum_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#HoleFiller_la_SOURCES = ../HoleFiller/HoleFiller.cpp\
-#			  ../HoleFiller/HoleFiller.h
-#HoleFiller_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) 
+HoleFiller_la_SOURCES = ../HoleFiller/HoleFiller.cpp\
+			  ../HoleFiller/HoleFiller.h
+HoleFiller_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) 
 
-#InternalFront_la_SOURCES = ../InternalFront/InternalFront.cpp\
-#										 ../InternalFront/InternalFront.h
-#InternalFront_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+InternalFront_la_SOURCES = ../InternalFront/InternalFront.cpp\
+										 ../InternalFront/InternalFront.h
+InternalFront_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#InterpFromGridToMesh_la_SOURCES = ../InterpFromGridToMesh/InterpFromGridToMesh.cpp\
-#			  ../InterpFromGridToMesh/InterpFromGridToMesh.h
-#InterpFromGridToMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
+InterpFromGridToMesh_la_SOURCES = ../InterpFromGridToMesh/InterpFromGridToMesh.cpp\
+			  ../InterpFromGridToMesh/InterpFromGridToMesh.h
+InterpFromGridToMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
 
-#InterpFromMeshToMesh2d_la_SOURCES = ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.cpp\
-#							../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.h
-#InterpFromMeshToMesh2d_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
+InterpFromMeshToMesh2d_la_SOURCES = ../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.cpp\
+							../InterpFromMeshToMesh2d/InterpFromMeshToMesh2d.h
+InterpFromMeshToMesh2d_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
 
-#InterpFromMeshToMesh3d_la_SOURCES = ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.cpp\
-#									../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.h
-#InterpFromMeshToMesh3d_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+InterpFromMeshToMesh3d_la_SOURCES = ../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.cpp\
+									../InterpFromMeshToMesh3d/InterpFromMeshToMesh3d.h
+InterpFromMeshToMesh3d_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#InterpFromMeshToGrid_la_SOURCES = ../InterpFromMeshToGrid/InterpFromMeshToGrid.cpp\
-#									../InterpFromMeshToGrid/InterpFromMeshToGrid.h
-#InterpFromMeshToGrid_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+InterpFromMeshToGrid_la_SOURCES = ../InterpFromMeshToGrid/InterpFromMeshToGrid.cpp\
+									../InterpFromMeshToGrid/InterpFromMeshToGrid.h
+InterpFromMeshToGrid_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#InterpFromMesh2d_la_SOURCES = ../InterpFromMesh2d/InterpFromMesh2d.cpp\
-#									../InterpFromMesh2d/InterpFromMesh2d.h
-#InterpFromMesh2d_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
+InterpFromMesh2d_la_SOURCES = ../InterpFromMesh2d/InterpFromMesh2d.cpp\
+									../InterpFromMesh2d/InterpFromMesh2d.h
+InterpFromMesh2d_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
 
-#KMLFileRead_la_SOURCES = ../KMLFileRead/KMLFileRead.cpp\
-#			  ../KMLFileRead/KMLFileRead.h
-#KMLFileRead_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+KMLFileRead_la_SOURCES = ../KMLFileRead/KMLFileRead.cpp\
+			  ../KMLFileRead/KMLFileRead.h
+KMLFileRead_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#KMLMeshWrite_la_SOURCES = ../KMLMeshWrite/KMLMeshWrite.cpp\
-#			  ../KMLMeshWrite/KMLMeshWrite.h
-#KMLMeshWrite_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+KMLMeshWrite_la_SOURCES = ../KMLMeshWrite/KMLMeshWrite.cpp\
+			  ../KMLMeshWrite/KMLMeshWrite.h
+KMLMeshWrite_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#KMLOverlay_la_SOURCES = ../KMLOverlay/KMLOverlay.cpp\
-#			  ../KMLOverlay/KMLOverlay.h
-#KMLOverlay_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+KMLOverlay_la_SOURCES = ../KMLOverlay/KMLOverlay.cpp\
+			  ../KMLOverlay/KMLOverlay.h
+KMLOverlay_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#Xy2ll_la_SOURCES = ../Xy2ll/Xy2ll.cpp\
-#			  ../Xy2ll/Xy2ll.h
-#Xy2ll_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+Xy2ll_la_SOURCES = ../Xy2ll/Xy2ll.cpp\
+			  ../Xy2ll/Xy2ll.h
+Xy2ll_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#Ll2xy_la_SOURCES = ../Ll2xy/Ll2xy.cpp\
-#			  ../Ll2xy/Ll2xy.h
-#Ll2xy_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+Ll2xy_la_SOURCES = ../Ll2xy/Ll2xy.cpp\
+			  ../Ll2xy/Ll2xy.h
+Ll2xy_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#Exp2Kml_la_SOURCES = ../Exp2Kml/Exp2Kml.cpp\
-#			  ../Exp2Kml/Exp2Kml.h
-#Exp2Kml_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+Exp2Kml_la_SOURCES = ../Exp2Kml/Exp2Kml.cpp\
+			  ../Exp2Kml/Exp2Kml.h
+Exp2Kml_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#Kml2Exp_la_SOURCES = ../Kml2Exp/Kml2Exp.cpp\
-#			  ../Kml2Exp/Kml2Exp.h
-#Kml2Exp_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+Kml2Exp_la_SOURCES = ../Kml2Exp/Kml2Exp.cpp\
+			  ../Kml2Exp/Kml2Exp.h
+Kml2Exp_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#Kriging_la_SOURCES = ../Kriging/Kriging.cpp\
-#						../Kriging/Kriging.h
-#Kriging_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
+Kriging_la_SOURCES = ../Kriging/Kriging.cpp\
+						../Kriging/Kriging.h
+Kriging_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
 
-#MeshPartition_la_SOURCES = ../MeshPartition/MeshPartition.cpp\
-#			  ../MeshPartition/MeshPartition.h
-#MeshPartition_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+MeshPartition_la_SOURCES = ../MeshPartition/MeshPartition.cpp\
+			  ../MeshPartition/MeshPartition.h
+MeshPartition_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#MeshProfileIntersection_la_SOURCES = ../MeshProfileIntersection/MeshProfileIntersection.cpp\
-#			  ../MeshProfileIntersection/MeshProfileIntersection.h
-#MeshProfileIntersection_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+MeshProfileIntersection_la_SOURCES = ../MeshProfileIntersection/MeshProfileIntersection.cpp\
+			  ../MeshProfileIntersection/MeshProfileIntersection.h
+MeshProfileIntersection_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#NodeConnectivity_la_SOURCES = ../NodeConnectivity/NodeConnectivity.cpp\
-#										../NodeConnectivity/NodeConnectivity.h
-#NodeConnectivity_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+NodeConnectivity_la_SOURCES = ../NodeConnectivity/NodeConnectivity.cpp\
+										../NodeConnectivity/NodeConnectivity.h
+NodeConnectivity_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#PointCloudFindNeighbors_la_SOURCES = ../PointCloudFindNeighbors/PointCloudFindNeighbors.cpp\
-#			  ../PointCloudFindNeighbors/PointCloudFindNeighbors.h
-#PointCloudFindNeighbors_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
+PointCloudFindNeighbors_la_SOURCES = ../PointCloudFindNeighbors/PointCloudFindNeighbors.cpp\
+			  ../PointCloudFindNeighbors/PointCloudFindNeighbors.h
+PointCloudFindNeighbors_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(MULTITHREADINGLIB)
 
-#PropagateFlagsFromConnectivity_la_SOURCES = ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.cpp\
-#			  ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.h
-#PropagateFlagsFromConnectivity_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+PropagateFlagsFromConnectivity_la_SOURCES = ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.cpp\
+			  ../PropagateFlagsFromConnectivity/PropagateFlagsFromConnectivity.h
+PropagateFlagsFromConnectivity_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#Scotch_la_SOURCES = ../Scotch/Scotch.cpp\
-#                    ../Scotch/Scotch.h
-#Scotch_la_LIBADD = ${deps} $(SCOTCHLIB)
+Scotch_la_SOURCES = ../Scotch/Scotch.cpp\
+                    ../Scotch/Scotch.h
+Scotch_la_LIBADD = ${deps} $(SCOTCHLIB)
 
-#Shp2Kml_la_SOURCES = ../Shp2Kml/Shp2Kml.cpp\
-#                     ../Shp2Kml/Shp2Kml.h
-#Shp2Kml_la_LIBADD = ${deps}
+Shp2Kml_la_SOURCES = ../Shp2Kml/Shp2Kml.cpp\
+                     ../Shp2Kml/Shp2Kml.h
+Shp2Kml_la_LIBADD = ${deps}
 
-#TriaSearch_la_SOURCES = ../TriaSearch/TriaSearch.cpp\
-#			  ../TriaSearch/TriaSearch.h
-#TriaSearch_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+TriaSearch_la_SOURCES = ../TriaSearch/TriaSearch.cpp\
+			  ../TriaSearch/TriaSearch.h
+TriaSearch_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 
-#TriMesh_la_SOURCES = ../TriMesh/TriMesh.cpp\
-#                     ../TriMesh/TriMesh.h
-#TriMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(TRIANGLELIB)
+TriMesh_la_SOURCES = ../TriMesh/TriMesh.cpp\
+                     ../TriMesh/TriMesh.h
+TriMesh_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB) $(TRIANGLELIB)
 
-#TriMeshProcessRifts_la_SOURCES = ../TriMeshProcessRifts/TriMeshProcessRifts.cpp\
-#			  ../TriMeshProcessRifts/TriMeshProcessRifts.h
-#TriMeshProcessRifts_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
+TriMeshProcessRifts_la_SOURCES = ../TriMeshProcessRifts/TriMeshProcessRifts.cpp\
+			  ../TriMeshProcessRifts/TriMeshProcessRifts.h
+TriMeshProcessRifts_la_LIBADD = ${deps} $(MPILIB) $(PETSCLIB)
 #}}}