Changeset 6672

Timestamp:

11/26/10 12:36:31 (14 years ago)

Author:

Eric.Larour

Message:

Added io_gather options

File:

• issm/trunk/src/m/classes/clusters/pfe.m (modified) (2 diffs)

issm/trunk/src/m/classes/clusters/pfe.m

@@ -138 +138 @@
                          fprintf(fid,'cd $PBS_O_WORKDIR\n\n');
 
-                         fprintf(fid,'mpiexec -verbose -np %i %s/issm.exe %s $PBS_O_WORKDIR %s.bin %s.petsc %s.outbin %s.lock',cluster.np,cluster.codepath,EnumToString(analysis_type),modelname,modelname,modelname,modelname);
+                         fprintf(fid,'mpiexec -verbose -np %i %s/issm.exe %s $PBS_O_WORKDIR %s.bin %s.petsc %s.outbin %s.lock\n',cluster.np,cluster.codepath,EnumToString(analysis_type),modelname,modelname,modelname,modelname);
+
+                         if ~md.io_gather,
+                                 %concatenate the output files:
+                                 fprintf(fid,'cat %s.outbin.* > %s.outbin',modelname,modelname);
+                         end
 
                          %close file
@@ -147 +152 @@
                          if cluster.interactive,
                                  fid=fopen([modelname '.run'],'w');
-                                 fprintf(fid,'mpiexec -verbose -np %i %s/issm.exe %s $PBS_O_WORKDIR %s.bin %s.petsc %s.outbin %s.lock',cluster.np,cluster.codepath,EnumToString(analysis_type),modelname,modelname,modelname,modelname);
+                                 fprintf(fid,'mpiexec -verbose -np %i %s/issm.exe %s $PBS_O_WORKDIR %s.bin %s.petsc %s.outbin %s.lock\n',cluster.np,cluster.codepath,EnumToString(analysis_type),modelname,modelname,modelname,modelname);
+                                 if ~md.io_gather,
+                                         %concatenate the output files:
+                                         fprintf(fid,'cat %s.outbin.* > %s.outbin',modelname,modelname);
+                                 end
                                  fclose(fid);
                                  fid=fopen([modelname '.errlog'],'w');