Index: /issm/trunk/externalpackages/dakota/configs/altix64/configure.sh =================================================================== --- /issm/trunk/externalpackages/dakota/configs/altix64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/dakota/configs/altix64/configure.sh (revision 6082) @@ -1,1 +1,1 @@ -./configure --prefix="$ISSM_DIR/externalpackages/dakota/install" --without-graphics --with-pic --with-blas=/opt/intel/mkl/9.1.023/lib/64/libmkl.so --with-lapack=/opt/intel/mkl/9.1.023/lib/64/libmkl_lapack.so --disable-mpi +./configure --prefix="$ISSM_TIER/externalpackages/dakota/install" --without-graphics --with-pic --with-blas=/opt/intel/mkl/9.1.023/lib/64/libmkl.so --with-lapack=/opt/intel/mkl/9.1.023/lib/64/libmkl_lapack.so --disable-mpi Index: /issm/trunk/externalpackages/dakota/configs/linux64/configure.sh =================================================================== --- /issm/trunk/externalpackages/dakota/configs/linux64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/dakota/configs/linux64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/dakota/install" --without-graphics --with-pic --disable-mpi --with-blas=/usr/lib64/libblas.so.3.0.3 --with-lapack=/usr/lib64/liblapack.so.3.0.3 +./configure --prefix="$ISSM_TIER/externalpackages/dakota/install" --without-graphics --with-pic --disable-mpi --with-blas=/usr/lib64/libblas.so.3.0.3 --with-lapack=/usr/lib64/liblapack.so.3.0.3 Index: /issm/trunk/externalpackages/dakota/configs/macosx32/configure.sh =================================================================== --- /issm/trunk/externalpackages/dakota/configs/macosx32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/dakota/configs/macosx32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/dakota/install" --without-graphics --with-pic --disable-mpi +./configure --prefix="$ISSM_TIER/externalpackages/dakota/install" --without-graphics --with-pic --disable-mpi Index: /issm/trunk/externalpackages/dakota/configs/macosx64/configure.sh =================================================================== --- /issm/trunk/externalpackages/dakota/configs/macosx64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/dakota/configs/macosx64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/dakota/install" --without-graphics --with-pic --disable-mpi +./configure --prefix="$ISSM_TIER/externalpackages/dakota/install" --without-graphics --with-pic --disable-mpi Index: /issm/trunk/externalpackages/dakota/configs/pleiades/configure.sh =================================================================== --- /issm/trunk/externalpackages/dakota/configs/pleiades/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/dakota/configs/pleiades/configure.sh (revision 6082) @@ -1,2 +1,2 @@ -./configure --prefix="$ISSM_DIR/externalpackages/dakota/install" --without-graphics --with-pic --with-blas="-L/nasa/intel/mkl/10.0.011/lib/64/ -lmkl -lmkl_lapack -liomp5 -lpthread" --with-lapack="-L/nasa/intel/mkl/10.0.011/lib/64/ -lmkl -lmkl_lapack -liomp5 -lpthread" --disable-mpi +./configure --prefix="$ISSM_TIER/externalpackages/dakota/install" --without-graphics --with-pic --with-blas="-L/nasa/intel/mkl/10.0.011/lib/64/ -lmkl -lmkl_lapack -liomp5 -lpthread" --with-lapack="-L/nasa/intel/mkl/10.0.011/lib/64/ -lmkl -lmkl_lapack -liomp5 -lpthread" --disable-mpi Index: /issm/trunk/externalpackages/graphviz/configs/altix64/configure.sh =================================================================== --- /issm/trunk/externalpackages/graphviz/configs/altix64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/graphviz/configs/altix64/configure.sh (revision 6082) @@ -1,1 +1,1 @@ -./configure --prefix="$ISSM_DIR/externalpackages/graphviz/install" +./configure --prefix="$ISSM_TIER/externalpackages/graphviz/install" Index: /issm/trunk/externalpackages/graphviz/configs/linux64/configure.sh =================================================================== --- /issm/trunk/externalpackages/graphviz/configs/linux64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/graphviz/configs/linux64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/graphviz/install" +./configure --prefix="$ISSM_TIER/externalpackages/graphviz/install" Index: /issm/trunk/externalpackages/graphviz/configs/macosx32/configure.sh =================================================================== --- /issm/trunk/externalpackages/graphviz/configs/macosx32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/graphviz/configs/macosx32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/graphviz/install" +./configure --prefix="$ISSM_TIER/externalpackages/graphviz/install" Index: /issm/trunk/externalpackages/mpich2/configs/altix64/configure.sh =================================================================== --- /issm/trunk/externalpackages/mpich2/configs/altix64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/mpich2/configs/altix64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/mpich2/install" --enable-sharedlibs=gcc --enable-f91=gfortran +./configure --prefix="$ISSM_TIER/externalpackages/mpich2/install" --enable-sharedlibs=gcc --enable-f91=gfortran Index: /issm/trunk/externalpackages/mpich2/configs/linux64/configure.sh =================================================================== --- /issm/trunk/externalpackages/mpich2/configs/linux64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/mpich2/configs/linux64/configure.sh (revision 6082) @@ -2,3 +2,3 @@ export CFLAGS="$CFLAGS -fPIC" export FFLAGS="$FFLAGS -fPIC" -./configure --prefix="$ISSM_DIR/externalpackages/mpich2/install" --enable-sharedlibs=gcc --enable-f91=gfortran +./configure --prefix="$ISSM_TIER/externalpackages/mpich2/install" --enable-sharedlibs=gcc --enable-f91=gfortran Index: /issm/trunk/externalpackages/mpich2/configs/macosx32/configure.sh =================================================================== --- /issm/trunk/externalpackages/mpich2/configs/macosx32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/mpich2/configs/macosx32/configure.sh (revision 6082) @@ -1,3 +1,3 @@ #!/bin/bash export CFLAGS=" -m32" -./configure --prefix="$ISSM_DIR/externalpackages/mpich2/install" --enable-f91=gfortran --enable-sharedlibs=osx-gcc +./configure --prefix="$ISSM_TIER/externalpackages/mpich2/install" --enable-f91=gfortran --enable-sharedlibs=osx-gcc Index: /issm/trunk/externalpackages/mpich2/configs/macosx64/configure.sh =================================================================== --- /issm/trunk/externalpackages/mpich2/configs/macosx64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/mpich2/configs/macosx64/configure.sh (revision 6082) @@ -2,3 +2,3 @@ export CFLAGS=" -arch i386" export FFLAGS=" -arch i386" -./configure --prefix="$ISSM_DIR/externalpackages/mpich2/install" --enable-f91=gfortran --enable-sharedlibs=osx-gcc +./configure --prefix="$ISSM_TIER/externalpackages/mpich2/install" --enable-f91=gfortran --enable-sharedlibs=osx-gcc Index: /issm/trunk/externalpackages/mpich2/configs/winxp32/configure.sh =================================================================== --- /issm/trunk/externalpackages/mpich2/configs/winxp32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/mpich2/configs/winxp32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/mpich2/install" +./configure --prefix="$ISSM_TIER/externalpackages/mpich2/install" Index: /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/altix64/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/altix64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/altix64/configure.sh (revision 6082) @@ -2,5 +2,5 @@ #set PETSC_DIR variable, in case. -PETSC_DIR=$ISSM_DIR/externalpackages/petsc/install +PETSC_DIR=$ISSM_TIER/externalpackages/petsc/install ./config/configure.py --prefix=$PETSC_DIR --with-batch=1 --ISSM_ARCH=$ISSM_ARCH --PETSC_DIR=$PETSC_DIR --with-debugging=no --with-shared=0 COPTFLAGS=-O3 FOPTFLAGS=-O3 --with-blas-lapack-dir=/opt/intel/mkl/9.1.023 --with-mpi-lib=/usr/lib/libmpi.so --with-mpi-include=/usr/include --with-mpi-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --with-plapack-dir=$PETSC_DIR/externalpackages/PLAPACKR32-hg/$ISSM_ARCH --FFLAGS=-I/usr/include --with-cc=icc --with-fc=ifort Index: /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/linux32-cosmos/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/linux32-cosmos/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/linux32-cosmos/configure.sh (revision 6082) @@ -1,3 +1,3 @@ -PETSC_DIR=$ISSM_DIR/externalpackages/petsc/install +PETSC_DIR=$ISSM_TIER/externalpackages/petsc/install ./config/configure.py --prefix=$PETSC_DIR --with-batch=1 --ISSM_ARCH=$ISSM_ARCH --PETSC_DIR=$PETSC_DIR --with-debugging=no COPTFLAGS=-O3 FOPTFLAGS=-O3 --with-blas-lapack-dir=/opt/intel/mkl/10.0.5.025/ --with-mpi-dir=/opt/mpich/gm/intel10.1/ --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-plapack=yes --FFLAGS=-I/usr/include --with-mpi-shared=0 Index: /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/linux64/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/linux64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/linux64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --prefix="$ISSM_DIR/externalpackages/petsc/install" --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install --PETSC_ARCH=linux-gnu-amd64 --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-fc=gfortran --with-debugging=1 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS=-I$ISSM_DIR/externalpackages/mpich2/install/include --download-plapack=yes --COPTFLAGS="-march=opteron -O2" --FOPTFLAGS="-march=opteron -O2" --CXXOPTFLAGS="-march=opteron -O2" +./config/configure.py --prefix="$ISSM_TIER/externalpackages/petsc/install" --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install --PETSC_ARCH=linux-gnu-amd64 --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-fc=gfortran --with-debugging=1 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS=-I$ISSM_TIER/externalpackages/mpich2/install/include --download-plapack=yes --COPTFLAGS="-march=opteron -O2" --FOPTFLAGS="-march=opteron -O2" --CXXOPTFLAGS="-march=opteron -O2" Index: /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/macosx32/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/macosx32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/macosx32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --prefix="$ISSM_DIR/externalpackages/petsc/install" --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran" --download-plapack=yes +./config/configure.py --prefix="$ISSM_TIER/externalpackages/petsc/install" --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran" --download-plapack=yes Index: /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/macosx64/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/macosx64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/macosx64/configure.sh (revision 6082) @@ -1,6 +1,6 @@ #!/bin/bash #Before MUMPS crashe with -DWport complaints -#./config/configure.py --prefix="$ISSM_DIR/externalpackages/petsc/install" --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran -fPIC -arch i386" --download-plapack=yes --CXXFLAGS=" -fPIC -arch i386" --CFLAGS=" -fPIC -arch i386" --with-pic --with-fc="gfortran -arch i386 " --LDFLAGS="-arch i386" +#./config/configure.py --prefix="$ISSM_TIER/externalpackages/petsc/install" --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran -fPIC -arch i386" --download-plapack=yes --CXXFLAGS=" -fPIC -arch i386" --CFLAGS=" -fPIC -arch i386" --with-pic --with-fc="gfortran -arch i386 " --LDFLAGS="-arch i386" #After you have compiled mumps (see faq on howto) -./config/configure.py --prefix="$ISSM_DIR/externalpackages/petsc/install" --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --with-mumps-dir=$ISSM_DIR/externalpackages/petsc/install/externalpackages/MUMPS_4.6.3 --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran -fPIC -arch i386" --download-plapack=yes --CXXFLAGS=" -fPIC -arch i386" --CFLAGS=" -fPIC -arch i386" --with-pic --with-fc="gfortran -arch i386 " --LDFLAGS="-arch i386" +./config/configure.py --prefix="$ISSM_TIER/externalpackages/petsc/install" --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --with-mumps-dir=$ISSM_TIER/externalpackages/petsc/install/externalpackages/MUMPS_4.6.3 --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran -fPIC -arch i386" --download-plapack=yes --CXXFLAGS=" -fPIC -arch i386" --CFLAGS=" -fPIC -arch i386" --with-pic --with-fc="gfortran -arch i386 " --LDFLAGS="-arch i386" Index: /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/pleiades/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/pleiades/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/pleiades/configure.sh (revision 6082) @@ -2,5 +2,5 @@ #set PETSC_DIR variable, in case. -PETSC_DIR=$ISSM_DIR/externalpackages/petsc/install +PETSC_DIR=$ISSM_TIER/externalpackages/petsc/install ./config/configure.py --prefix=$PETSC_DIR --with-batch=1 --PETSC_ARCH=$ISSM_ARCH --PETSC_DIR=$PETSC_DIR --with-debugging=no --with-shared=0 --with-blas-lapack-dir=/nasa/intel/mkl/10.0.011/ --with-mpi-lib=/nasa/sgi/mpt/1.23.nas/lib64/libmpi.so --with-mpi-include=/nasa/sgi/mpt/1.23.nas/include --with-mpi-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --with-plapack-dir=$PETSC_DIR/externalpackages/PLAPACKR32-hg/$ISSM_ARCH --FFLAGS=-I/usr/include --with-cc=icc --with-fc=ifort --COPTFLAGS=" -O3 -xS" --FOPTFLAGS=" -O3 -xS" --CXXOPTFLAGS=" -O3 -xS" Index: /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/winxp32/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/winxp32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/2.3.2-p3/winxp32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --with-parallel-no --prefix="$ISSM_DIR/externalpackages/petsc/install" --PETSC_ARCH=cygwin-intel --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-debugging=0 --with-mpi=0 --download-c-blas-lapack=1 +./config/configure.py --with-parallel-no --prefix="$ISSM_TIER/externalpackages/petsc/install" --PETSC_ARCH=cygwin-intel --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-debugging=0 --with-mpi=0 --download-c-blas-lapack=1 Index: /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/altix64/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/altix64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/altix64/configure.sh (revision 6082) @@ -2,5 +2,5 @@ #set PETSC_DIR variable, in case. -PETSC_DIR=$ISSM_DIR/externalpackages/petsc/install +PETSC_DIR=$ISSM_TIER/externalpackages/petsc/install ./config/configure.py --prefix=$PETSC_DIR --with-batch=1 --ISSM_ARCH=$ISSM_ARCH --PETSC_DIR=$PETSC_DIR --with-debugging=no --with-shared=0 COPTFLAGS=-O3 FOPTFLAGS=-O3 --with-blas-lapack-dir=/opt/intel/mkl/9.1.023 --with-mpi-lib=/usr/lib/libmpi.so --with-mpi-include=/usr/include --with-mpi-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --with-plapack-dir=$PETSC_DIR/externalpackages/PLAPACKR32-hg/$ISSM_ARCH --FFLAGS=-I/usr/include --with-cc=icc --with-fc=ifort Index: /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/linux32-cosmos/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/linux32-cosmos/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/linux32-cosmos/configure.sh (revision 6082) @@ -1,3 +1,3 @@ -PETSC_DIR=$ISSM_DIR/externalpackages/petsc/install +PETSC_DIR=$ISSM_TIER/externalpackages/petsc/install ./config/configure.py --prefix=$PETSC_DIR --with-batch=1 --ISSM_ARCH=$ISSM_ARCH --PETSC_DIR=$PETSC_DIR --with-debugging=no COPTFLAGS=-O3 FOPTFLAGS=-O3 --with-blas-lapack-dir=/opt/intel/mkl/10.0.5.025/ --with-mpi-dir=/opt/mpich/gm/intel10.1/ --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-plapack=yes --FFLAGS=-I/usr/include --with-mpi-shared=0 Index: /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/linux64/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/linux64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/linux64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --prefix="$ISSM_DIR/externalpackages/petsc/install" --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install --PETSC_ARCH=linux-gnu-amd64 --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS=-I$ISSM_DIR/externalpackages/mpich2/install/include --download-plapack=yes --COPTFLAGS="-march=opteron -O2" --FOPTFLAGS="-march=opteron -O2" --CXXOPTFLAGS="-march=opteron -O2" --download-parmetis=yes +./config/configure.py --prefix="$ISSM_TIER/externalpackages/petsc/install" --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install --PETSC_ARCH=linux-gnu-amd64 --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS=-I$ISSM_TIER/externalpackages/mpich2/install/include --download-plapack=yes --COPTFLAGS="-march=opteron -O2" --FOPTFLAGS="-march=opteron -O2" --CXXOPTFLAGS="-march=opteron -O2" --download-parmetis=yes Index: /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/macosx32/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/macosx32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/macosx32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --prefix="$ISSM_DIR/externalpackages/petsc/install" --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran" --download-plapack=yes +./config/configure.py --prefix="$ISSM_TIER/externalpackages/petsc/install" --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-fc=/usr/local/bin/gfortran --with-debugging=0 --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran" --download-plapack=yes Index: /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/macosx64/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/macosx64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/macosx64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --prefix="$ISSM_DIR/externalpackages/petsc/install" --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-debugging=0 --with-fc=/usr/local/bin/gfortran --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -m64" --download-plapack=yes --COPTFLAGS="-march=opteron -O2" --FOPTFLAGS="-march=opteron -O2" --CXXOPTFLAGS="-march=opteron -O2" --download-parmetis=yes +./config/configure.py --prefix="$ISSM_TIER/externalpackages/petsc/install" --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install --PETSC_ARCH=macosx-gnu --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-debugging=0 --with-fc=/usr/local/bin/gfortran --with-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --download-blas=yes --download-f-blas-lapack=yes --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -m64" --download-plapack=yes --COPTFLAGS="-march=opteron -O2" --FOPTFLAGS="-march=opteron -O2" --CXXOPTFLAGS="-march=opteron -O2" --download-parmetis=yes Index: /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/pleiades/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/pleiades/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/pleiades/configure.sh (revision 6082) @@ -2,5 +2,5 @@ #set PETSC_DIR variable, in case. -PETSC_DIR=$ISSM_DIR/externalpackages/petsc/install +PETSC_DIR=$ISSM_TIER/externalpackages/petsc/install ./config/configure.py --prefix=$PETSC_DIR --with-batch=1 --PETSC_ARCH=$ISSM_ARCH --PETSC_DIR=$PETSC_DIR --with-debugging=no --with-shared=0 --with-blas-lapack-dir=/nasa/intel/mkl/10.0.011/ --with-mpi-lib=/nasa/sgi/mpt/1.23.nas/lib64/libmpi.so --with-mpi-include=/nasa/sgi/mpt/1.23.nas/include --with-mpi-shared=0 --download-mumps=yes --download-scalapack=yes --download-blacs=yes --with-plapack-dir=$PETSC_DIR/externalpackages/PLAPACKR32-hg/$ISSM_ARCH --FFLAGS=-I/usr/include --with-cc=icc --with-fc=ifort --COPTFLAGS=" -O3 -xS" --FOPTFLAGS=" -O3 -xS" --CXXOPTFLAGS=" -O3 -xS" Index: /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/winxp32/configure.sh =================================================================== --- /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/winxp32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/petsc/configs/3.0.0-p11/winxp32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --with-parallel-no --prefix="$ISSM_DIR/externalpackages/petsc/install" --PETSC_ARCH=cygwin-intel --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" --with-debugging=0 --with-mpi=0 --download-c-blas-lapack=1 +./config/configure.py --with-parallel-no --prefix="$ISSM_TIER/externalpackages/petsc/install" --PETSC_ARCH=cygwin-intel --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" --with-debugging=0 --with-mpi=0 --download-c-blas-lapack=1 Index: /issm/trunk/externalpackages/valgrind/configs/altix64/configure.sh =================================================================== --- /issm/trunk/externalpackages/valgrind/configs/altix64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/valgrind/configs/altix64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/valgrind/install" +./configure --prefix="$ISSM_TIER/externalpackages/valgrind/install" Index: /issm/trunk/externalpackages/valgrind/configs/linux64/configure.sh =================================================================== --- /issm/trunk/externalpackages/valgrind/configs/linux64/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/valgrind/configs/linux64/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./configure --prefix="$ISSM_DIR/externalpackages/valgrind/install" +./configure --prefix="$ISSM_TIER/externalpackages/valgrind/install" Index: /issm/trunk/externalpackages/valgrind/configs/macosx32/configure.sh =================================================================== --- /issm/trunk/externalpackages/valgrind/configs/macosx32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/valgrind/configs/macosx32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --prefix="$ISSM_DIR/externalpackages/valgrind/install" +./config/configure.py --prefix="$ISSM_TIER/externalpackages/valgrind/install" Index: /issm/trunk/externalpackages/valgrind/configs/winxp32/configure.sh =================================================================== --- /issm/trunk/externalpackages/valgrind/configs/winxp32/configure.sh (revision 6081) +++ /issm/trunk/externalpackages/valgrind/configs/winxp32/configure.sh (revision 6082) @@ -1,2 +1,2 @@ #!/bin/bash -./config/configure.py --prefix="$ISSM_DIR/externalpackages/valgrind/install" +./config/configure.py --prefix="$ISSM_TIER/externalpackages/valgrind/install"