Index: /issm/trunk/scripts/dailyrun.sh
===================================================================
--- /issm/trunk/scripts/dailyrun.sh	(revision 5077)
+++ /issm/trunk/scripts/dailyrun.sh	(revision 5077)
@@ -0,0 +1,97 @@
+#!/bin/bash
+#This bash script calls the dailyrun.m matlab file to run our daily test decks. 
+#It then processes the results and sends an email to the Ice developpers.
+
+#some functions
+function timer() #{{{1
+{
+	if [[ $# -eq 0 ]]; then
+		echo $(date '+%s')
+	else
+		local  stime=$1
+		etime=$(date '+%s')
+
+		if [[ -z "$stime" ]]; then stime=$etime; fi
+
+		dt=$((etime - stime))
+		ds=$((dt % 60))
+		dm=$(((dt / 60) % 60))
+		dh=$((dt / 3600))
+		printf '%d:%02d:%02d' $dh $dm $ds
+	fi
+} #}}}
+function todaydate() #{{{1
+{
+	suffix=`date | awk '{printf("%s-%s-%s  %s",$2,$3,$6,$4);}'`			 
+	echo $suffix;			 
+} #}}}
+function host_name() #{{{1
+{
+	#return host name depending on the OS
+	if [ "$1" = "winxp32" ] 
+	then
+		HOST_NAME=`hostname`;
+	else
+		HOST_NAME=`hostname -s`;
+	fi
+	echo $HOST_NAME;
+} #}}}
+
+#Get configuration
+#Initialize variables {{{1
+TODAY=$(todaydate);
+HOST_NAME=$(host_name $OS);
+START_TIME=$(timer);
+ISSM_RELEASE="N/A"
+USER=$(whoami);
+INIT_PATH=$(pwd);
+#}}}
+
+#Prepare run
+#Windows hack for startup.m {{{1
+#windows environments: ISSM_DIR_WIN variable not correctly picked up when using 
+#the cron job. just get startup to take the ISSM_DIR variable as the pwd:
+if [ "$OS" = "winxp32" ]
+then
+	cat startup.m | sed 's/clear status/clear status; ISSM_DIR=pwd;/g' > startup.m.bak
+	mv startup.m.bak startup.m
+fi
+#}}}
+#Create dailylog directory and daily.log {{{1
+#put installation elapsed time in daily.log
+INSTALL_TIME=$(timer)
+ELAPSED_INSTALL=$(timer $START_TIME)
+rm -rf $ISSM_DIR/dailylog
+mkdir  $ISSM_DIR/dailylog
+cat << END > $ISSM_DIR/dailylog/daily.log
+today:     $(echo $TODAY)
+user:      $(echo $USER)
+host:      $(echo $HOST_NAME)
+OS:        N/A
+release:   N/A
+init_path: $(echo $INIT_PATH)
+elapsed_install: $(echo $ELAPSED_INSTALL)
+END
+#}}}
+
+#Run tests
+#Call run.sh script{{{1
+cd $ISSM_DIR/scripts
+./run.sh
+#}}}
+#Complete daily.log {{{1
+ELAPSED_RUN=$(timer $INSTALL_TIME)
+ELAPSED_TOTAL=$(timer $START_TIME)
+cat << END >>  $ISSM_DIR/dailylog/daily.log
+elapsed_run:   $(echo $ELAPSED_RUN)
+elapsed_total: $(echo $ELAPSED_TOTAL)
+END
+#}}}
+
+#Send Report
+#Build html report {{{1
+cd $ISSM_DIR/dailylog/
+sh ../cron/report.sh
+ln -s $ISSM_DIR/dailylog/report.html $INIT_PATH
+echo "html report located in $ISSM_DIR/dailylog/report.html and $INIT_PATH"
+#}}}
Index: /issm/trunk/scripts/run.sh
===================================================================
--- /issm/trunk/scripts/run.sh	(revision 5077)
+++ /issm/trunk/scripts/run.sh	(revision 5077)
@@ -0,0 +1,59 @@
+#!/bin/bash
+
+#prepare runs
+NUMCPUS_RUN=7
+NROPTIONS="";
+MATLAB_VERSION="7.6" #7.2,7.4,7.6 and 7.8
+#create softlink to startup {{{1
+cd $ISSM_DIR/test/NightlyRun/
+ln -s $ISSM_DIR/startup.m .
+#}}}
+
+#Launch all tests on different cpus
+for (( i=1;i<=$NUMCPUS_RUN;i++ ))
+do
+	#Launch matlab and the daily run script
+	cat > $ISSM_DIR/dailylog/matlab_run$i.m << EOF
+	warning off %necessary to avoid a daily.log of several Go for parallel runs
+	try,
+		cd $ISSM_DIR/test/NightlyRun
+		startup;
+		$(if [ "$NROPTIONS" = ""  ]
+	then
+		echo "runme('output','daily','rank',$i,'numprocs',$NUMCPUS_RUN);"
+	else
+		echo "runme($NROPTIONS,'output','daily','rank',$i,'numprocs',$NUMCPUS_RUN);"
+	fi
+	)
+	catch me,
+		%An error occured, get report and exit
+		directory=strsplit(pwd,'/');
+		message=getReport(me)
+		fid=fopen([ISSM_DIR '/dailylog/matlaberror.log'], 'at');
+		fprintf(fid,'\nMatlab error occured in: %s\n\n',directory{end});
+		fprintf(fid,'%s',message);
+		fclose(fid);
+	end
+	exit
+EOF
+
+	#Start run from dailylog directory
+	cd $ISSM_DIR/dailylog/
+
+	#Start test
+	/usr/local/pkgs/matlab-$MATLAB_VERSION/bin/matlab  -nojvm -nosplash  -r matlab_run$i -logfile matlab_log$i.log &
+
+done
+
+#wait until matlab closes
+wait
+
+#concatenate all reports
+mv matlab_log1.log  matlab_log.log
+for (( i=2;i<=$NUMCPUS_RUN;i++ ))
+do
+	cat matlab_log.log matlab_log$i.log > matlab_log.log.bak
+	mv matlab_log.log.bak matlab_log.log
+	rm matlab_log$i.log
+
+done