Changeset 24948

Timestamp:

06/01/20 15:03:45 (5 years ago)

Author:

jdquinn

Message:

BUG: Linking issue.

Location:

issm/trunk-jpl

Files:

• externalpackages/gmt/install-6.0-linux-static.sh (modified) (2 diffs)
• jenkins/ross-debian_linux-binaries-solid_earth (modified) (1 diff)

issm/trunk-jpl/externalpackages/gmt/install-6.0-linux-static.sh

@@ -17 +17 @@
 ZLIB_ROOT="${PETSC_ROOT}"
 
-GDAL_LIBRARY="${GDAL_ROOT}/lib/libgdal.a;${NETCDF_ROOT}/lib/libnetcdf.a;${HDF5_ROOT}/lib/libhdf5_hl.a;${HDF5_ROOT}/lib/libhdf5.a;${PROJ_ROOT}/lib/libproj.a;${ZLIB_ROOT}/lib/libz.a;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;${CURL_ROOT}/lib/libcurl.a;/usr/lib/x86_64-linux-gnu/libssl.a;/usr/lib/x86_64-linux-gnu/libcrypto.a;/usr/lib/x86_64-linux-gnu/libsqlite3.a;/usr/lib/x86_64-linux-gnu/libexpat.a;/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.25;" # Determined by running `$GDAL_ROOT/bin/gdal-config --dep-libs`, removing duplicate libs, then adding libmpicxx as, otherwise, various symbols in libgdal are undefined (compiled with mpicxx)
-NETCDF_LIBRARY="${NETCDF_ROOT}/lib/libnetcdf.a;/usr/lib/x86_64-linux-gnu/libm.so;${CURL_ROOT}/lib/libcurl.a;${HDF5_ROOT}/lib/libhdf5_hl.a;${HDF5_ROOT}/lib/libhdf5.a;${ZLIB_ROOT}/lib/libz.a;/usr/lib/x86_64-linux-gnu/libssl.a;/usr/lib/x86_64-linux-gnu/libcrypto.a;/usr/lib/x86_64-linux-gnu/libdl.so" # Determined by running `$NETCDF_ROOT/bin/nc-config --libs`
+GDAL_LIBRARY="${GDAL_ROOT}/lib/libgdal.a;${NETCDF_ROOT}/lib/libnetcdf.a;${HDF5_ROOT}/lib/libhdf5_hl.a;${HDF5_ROOT}/lib/libhdf5.a;${PROJ_ROOT}/lib/libproj.a;${ZLIB_ROOT}/lib/libz.a;-L/usr/lib/x86_64-linux-gnu;-lpthread;-lm;-lrt;-ldl;${CURL_ROOT}/lib/libcurl.a;/usr/lib/x86_64-linux-gnu/libssl.a;/usr/lib/x86_64-linux-gnu/libcrypto.a;/usr/lib/x86_64-linux-gnu/libsqlite3.a;/usr/lib/x86_64-linux-gnu/libexpat.a;-lstdc++" # Determined by running `$GDAL_ROOT/bin/gdal-config --dep-libs`, removing duplicate libs, then adding libmpicxx as, otherwise, various symbols in libgdal are undefined (compiled with mpicxx)
+NETCDF_LIBRARY="${NETCDF_ROOT}/lib/libnetcdf.a;-L/usr/lib/x86_64-linux-gnu;-lm;${CURL_ROOT}/lib/libcurl.a;${HDF5_ROOT}/lib/libhdf5_hl.a;${HDF5_ROOT}/lib/libhdf5.a;${ZLIB_ROOT}/lib/libz.a;/usr/lib/x86_64-linux-gnu/libssl.a;/usr/lib/x86_64-linux-gnu/libcrypto.a;-ldl" # Determined by running `$NETCDF_ROOT/bin/nc-config --libs`
 
 # Environment
@@ -60 +60 @@
 #
 cmake \
-        -DBLAS_LIBRARIES="${BLASLAPACK_ROOT}/lib/libfblas.a;/usr/lib/x86_64-linux-gnu/libgfortran.so" \
+        -DBLAS_LIBRARIES="${BLASLAPACK_ROOT}/lib/libfblas.a;-L/usr/lib/x86_64-linux-gnu;-lgfortran" \
         -DCURL_LIBRARY="${CURL_ROOT}/lib" \
         -DCURL_INCLUDE_DIR="${CURL_ROOT}/include" \
-        -DLAPACK_LIBRARIES="${BLASLAPACK_ROOT}/lib/libflapack.a;/usr/lib/x86_64-linux-gnu/libgfortran.so" \
+        -DLAPACK_LIBRARIES="${BLASLAPACK_ROOT}/lib/libflapack.a;-L/usr/lib/x86_64-linux-gnu;-lgfortran" \
         -DGDAL_LIBRARY="${GDAL_LIBRARY}" \
         -DNETCDF_LIBRARY="${NETCDF_LIBRARY}" \

issm/trunk-jpl/jenkins/ross-debian_linux-binaries-solid_earth

@@ -44 +44 @@
         cmake           install.sh
         petsc           install-3.12-linux-solid_earth-static.sh
-        boost           install-1.72-linux-static.sh
+        boost           install-1.7-linux-static.sh
         triangle        install-linux-static.sh
         chaco           install.sh