Changeset 24331 for issm/trunk-jpl/externalpackages/petsc

Timestamp:

11/14/19 12:36:05 (6 years ago)

Author:

jdquinn

Message:

CHG: Will have to wait for upgrade to Ubuntu 18 to use latest versions of MPICH and PETSc (alternatively, gfortran could be upgraded, but we need to update Ubuntu at some point anyhow)

File:

• issm/trunk-jpl/externalpackages/petsc/install-3.7-linux64.sh (modified) (2 diffs)

issm/trunk-jpl/externalpackages/petsc/install-3.7-linux64.sh

@@ -2 +2 @@
 set -eu
 
-#Some cleanup
-rm -rf install petsc-3.7.6 src
+
+## Constants
+#
+VER="3.7.6"
+
+# Download source
+$ISSM_DIR/scripts/DownloadExternalPackage.sh "https://issm.ess.uci.edu/files/externalpackages/petsc-lite-${VER}.tar.gz" "petsc-${VER}.tar.gz"
+
+# Unpack source
+tar -zxvf  petsc-$VER.tar.gz
+
+# Cleanup
+rm -rf install src
 mkdir install src
 
-#Download from ISSM server
-$ISSM_DIR/scripts/DownloadExternalPackage.sh 'https://issm.ess.uci.edu/files/externalpackages/petsc-lite-3.7.6.tar.gz' 'petsc-3.7.6.tar.gz'
+# Move source to 'src' directory
+mv petsc-$VER/* src/
+rm -rf petsc-$VER
 
-#Untar and move petsc to install directory
-tar -zxvf  petsc-3.7.6.tar.gz
-mv petsc-3.7.6/* src/
-rm -rf petsc-3.7.6
-
-#configure
+# Configure
 cd src
 ./config/configure.py \
-        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
-        --with-mpi-dir="$ISSM_DIR/externalpackages/mpich/install" \
-        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
+        --prefix="${ISSM_DIR}/externalpackages/petsc/install" \
+        --PETSC_DIR="${ISSM_DIR}/externalpackages/petsc/src" \
+        --with-mpi-dir="${ISSM_DIR}/externalpackages/mpich/install" \
+        --with-blas-lib="-L${ISSM_DIR}/externalpackages/lapack/install/lib -lblas" \
+        --with-lapack-lib="-L${ISSM_DIR}/externalpackages/lapack/install/lib -llapack" \
         --with-debugging=0 \
         --with-valgrind=0 \
@@ -25 +34 @@
         --with-ssl=0 \
         --with-shared-libraries=1 \
+        --download-zlib=1\
+        --download-hdf5=1 \
+        --download-netcdf=1 \
         --download-metis=1 \
         --download-parmetis=1 \
-        --download-mumps=1 \
         --download-scalapack=1 \
-        --download-fblaslapack=1 \
-        --with-pic=1
+        --download-mumps=1
 
-#Compile and intall
-make
-make install
+# Compile and install
+if [ $# -eq 0 ]; then
+        make
+        make install
+else
+        make -j $1
+        make -j $1 install
+fi
+
+# Return to initial directory
+cd ..