Index: /issm/trunk-jpl/externalpackages/dakota/configs/6.2/BuildDakotaCustom.cmake.aurora.patch
===================================================================
--- /issm/trunk-jpl/externalpackages/dakota/configs/6.2/BuildDakotaCustom.cmake.aurora.patch	(revision 23616)
+++ /issm/trunk-jpl/externalpackages/dakota/configs/6.2/BuildDakotaCustom.cmake.aurora.patch	(revision 23616)
@@ -0,0 +1,38 @@
+54,55c54,55
+< #set( CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} <flag>"
+< #     CACHE STRING "CXX Flags for my platform" )
+---
+> set( CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -DMPICH_IGNORE_CXX_SEEK"
+>      CACHE STRING "CXX Flags for my platform" )
+67a68,78
+> set( DAKOTA_HAVE_MPI ON
+>  CACHE BOOL "Always build with MPI enabled" FORCE)
+> set( MPI_INCLUDE_PATH
+>  "$ENV{ISSM_DIR}/externalpackages/mpich/install/include"
+>  CACHE FILEPATH "Use installed MPI headers" FORCE)
+> set( MPI_LIBRARY
+>  "$ENV{ISSM_DIR}/externalpackages/mpich/install/lib/libmpich.so"
+>  CACHE FILEPATH "Use installed MPI library" FORCE)
+> set( MPI_EXTRA_LIBRARY
+>  "$ENV{ISSM_DIR}/externalpackages/mpich/install/lib/libmpich.so"
+>	CACHE FILEPATH "Use MPI extra libraries" FORCE)
+73,77c73,77
+< #set(BOOST_ROOT
+< #    "path/to/custom/Boost/install/directory"
+< #    CACHE PATH "Use non-standard Boost install" FORCE)
+< #set( Boost_NO_SYSTEM_PATHS TRUE
+< #     CACHE BOOL "Supress search paths other than BOOST_ROOT" FORCE)
+---
+> set(BOOST_ROOT
+>     "$ENV{ISSM_DIR}/externalpackages/boost/install"
+>     CACHE PATH "Use non-standard Boost install" FORCE)
+> set( Boost_NO_SYSTEM_PATHS TRUE
+>      CACHE BOOL "Supress search paths other than BOOST_ROOT" FORCE)
+91,93c91,93
+< #set( CMAKE_INSTALL_PREFIX
+< #     "/path/to/Dakota/installation"
+< #     CACHE PATH "Path to Dakota installation" )
+---
+> set( CMAKE_INSTALL_PREFIX
+>      "$ENV{ISSM_DIR}/externalpackages/dakota/install"
+>      CACHE PATH "Path to Dakota installation" )
Index: /issm/trunk-jpl/externalpackages/dakota/configs/6.2/CMakeLists.txt.aurora.patch
===================================================================
--- /issm/trunk-jpl/externalpackages/dakota/configs/6.2/CMakeLists.txt.aurora.patch	(revision 23616)
+++ /issm/trunk-jpl/externalpackages/dakota/configs/6.2/CMakeLists.txt.aurora.patch	(revision 23616)
@@ -0,0 +1,6 @@
+156c153,155
+< # TODO: Can't this be integrated into the following logic?
+---
+> # TODO: Can't this be integrated into the following logic?
+> set(BLAS_LIBS "-L/opt/intel/composer_xe_2013.5.192/mkl/lib/intel64/ -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -L/usr/lib64/ -lpthread -lm")
+> set(LAPACK_LIBS "-L/opt/intel/composer_xe_2013.5.192/mkl/lib/intel64/ -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -L/usr/lib64/ -lpthread -lm")
Index: /issm/trunk-jpl/externalpackages/dakota/install-6.2-aurora.sh
===================================================================
--- /issm/trunk-jpl/externalpackages/dakota/install-6.2-aurora.sh	(revision 23616)
+++ /issm/trunk-jpl/externalpackages/dakota/install-6.2-aurora.sh	(revision 23616)
@@ -0,0 +1,58 @@
+#!/bin/bash
+set -eu
+
+#Some cleanup
+rm -rf Dakota
+rm -rf src 
+rm -rf build 
+rm -rf install 
+mkdir src build install 
+
+#Download from ISSM server
+$ISSM_DIR/scripts/DownloadExternalPackage.sh 'https://issm.ess.uci.edu/files/externalpackages/dakota-6.2-public.src.tar.gz' 'dakota-6.2-public-src.tar.gz'
+
+#Untar 
+tar -zxvf dakota-6.2-public-src.tar.gz
+
+#Move Dakota to src directory
+mv dakota-6.2.0.src/* src
+rm -rf dakota-6.2.0.src
+
+#Set up Dakota cmake variables and config
+export DAK_SRC=$ISSM_DIR/externalpackages/dakota/src
+export DAK_BUILD=$ISSM_DIR/externalpackages/dakota/build
+export MPIHOME=$ISSM_DIR/externalpackages/mpich/install
+cp $DAK_SRC/cmake/BuildDakotaTemplate.cmake $DAK_SRC/cmake/BuildDakotaCustom.cmake
+patch $DAK_SRC/cmake/BuildDakotaCustom.cmake configs/6.2/BuildDakotaCustom.cmake.aurora.patch
+patch $DAK_SRC/cmake/DakotaDev.cmake configs/6.2/DakotaDev.cmake.patch
+patch $DAK_SRC/CMakeLists.txt configs/6.2/CMakeLists.txt.aurora.patch
+
+#Apply patches
+patch src/src/NonDSampling.cpp configs/6.2/NonDSampling.cpp.patch
+patch src/src/NonDLocalReliability.cpp configs/6.2/NonDLocalReliability.cpp.patch
+patch src/packages/pecos/src/pecos_global_defs.hpp configs/6.2/pecos_global_defs.hpp.patch
+
+#Configure dakota
+cd $DAK_BUILD
+
+cmake -D CMAKE_C_COMPILER=/opt/intel/impi/4.1.3/intel64/bin/mpicc \
+	   -D CMAKE_CXX_COMPILER=/opt/intel/impi/4.1.3/intel64/bin/mpicxx \
+	   -D CMAKE_Fortran_COMPILER=/usr/bin/gfortran \
+		-DHAVE_ACRO=off \
+		-DHAVE_JEGA=off \
+		-C $DAK_SRC/cmake/BuildDakotaCustom.cmake \
+		-C $DAK_SRC/cmake/DakotaDev.cmake \
+		$DAK_SRC
+cd ..
+
+#Compile and install dakota
+cd $DAK_BUILD
+if [ $# -eq 0 ];
+then
+	make
+	make install
+else
+	make -j $1
+	make -j $1 install
+fi
+cd ..
Index: /issm/trunk-jpl/externalpackages/petsc/install-3.6-aurora.sh
===================================================================
--- /issm/trunk-jpl/externalpackages/petsc/install-3.6-aurora.sh	(revision 23615)
+++ /issm/trunk-jpl/externalpackages/petsc/install-3.6-aurora.sh	(revision 23616)
@@ -47,5 +47,5 @@
 module load intel/cluster-toolkit-2013.5.192
 
-export PATH="$PATH:.:/opt/intel/impi/4.1.3/intel64/"
+export PATH="$PATH:.:/opt/intel/impi/4.1.3/intel64/bin/"
 export MPI_GROUP_MAX=64
 cd $RUN_DIR