Index: /issm/trunk-jpl/src/m/classes/spatiallinearbasalforcings.m
===================================================================
--- /issm/trunk-jpl/src/m/classes/spatiallinearbasalforcings.m	(revision 22945)
+++ /issm/trunk-jpl/src/m/classes/spatiallinearbasalforcings.m	(revision 22945)
@@ -0,0 +1,110 @@
+%SPATIAL LINEAR BASAL FORCINGS class definition
+%
+%   Usage:
+%      spatiallinearbasalforcings=spatiallinearbasalforcings();
+
+classdef spatiallinearbasalforcings
+	properties (SetAccess=public) 
+		groundedice_melting_rate  = NaN;
+		deepwater_melting_rate    = NaN;
+		deepwater_elevation       = NaN;
+		upperwater_elevation      = NaN;
+		geothermalflux            = NaN;
+	end
+	methods
+		function self = spatiallinearbasalforcings(varargin) % {{{
+			switch nargin
+				case 0
+					self=setdefaultparameters(self);
+				case 1
+					lb=varargin{1};
+					if strcmpi(class(lb),'linearbasalforcings'),
+						nvertices=length(lb.groundedice_melting_rate);
+						self.groundedice_melting_rate=lb.groundedice_melting_rate;
+						self.geothermalflux=lb.geothermalflux;
+						self.deepwater_elevation=lb.deepwater_elevation*ones(nvertices,1);
+						self.deepwater_melting_rate=lb.deepwater_melting_rate*ones(nvertices,1);
+						self.upperwater_elevation=lb.upperwater_elevation*ones(nvertices,1);
+					else 
+						self=structtoobj(spatiallinearbasalforcings(),varargin{1});
+					end
+				otherwise
+					error('constructor not supported');
+			end
+		end % }}}
+		function self = extrude(self,md) % {{{
+			self.groundedice_melting_rate=project3d(md,'vector',self.groundedice_melting_rate,'type','node','layer',1); 
+			self.deepwater_melting_rate=project3d(md,'vector',self.deepwater_melting_rate,'type','node','layer',1); 
+			self.deepwater_elevation=project3d(md,'vector',self.deepwater_elevation,'type','node','layer',1); 
+			self.upperwater_elevation=project3d(md,'vector',self.upperwater_elevation,'type','node','layer',1); 
+			self.geothermalflux=project3d(md,'vector',self.geothermalflux,'type','node','layer',1); %bedrock only gets geothermal flux
+		end % }}}
+		function self = initialize(self,md) % {{{
+
+			if isnan(self.groundedice_melting_rate),
+				self.groundedice_melting_rate=zeros(md.mesh.numberofvertices,1);
+				disp('      no basalforcings.groundedice_melting_rate specified: values set as zero');
+			end
+
+		end % }}}
+		function self = setdefaultparameters(self) % {{{
+
+			%default values for melting parameterization: can't, we don't have the vertices information!
+			%self.deepwater_melting_rate = 50;
+			%self.deepwater_elevation    = -800;
+			%self.upperwater_elevation   = -400;
+
+		end % }}}
+		function md = checkconsistency(self,md,solution,analyses) % {{{
+
+			if ismember('MasstransportAnalysis',analyses) & ~(strcmp(solution,'TransientSolution') & md.transient.ismasstransport==0),
+				md = checkfield(md,'fieldname','basalforcings.groundedice_melting_rate','NaN',1,'Inf',1,'timeseries',1);
+				md = checkfield(md,'fieldname','basalforcings.deepwater_melting_rate','NaN',1,'Inf',1,'timeseries',1,'>=',0);
+				md = checkfield(md,'fieldname','basalforcings.deepwater_elevation','NaN',1,'Inf',1,'timeseries',1);
+				md = checkfield(md,'fieldname','basalforcings.upperwater_elevation','NaN',1,'Inf',1,'timeseries',1,'<',0);
+			end
+			if ismember('BalancethicknessAnalysis',analyses),
+				error('not implemented yet!');
+				md = checkfield(md,'fieldname','basalforcings.groundedice_melting_rate','NaN',1,'Inf',1,'size',[md.mesh.numberofvertices 1]);
+				md = checkfield(md,'fieldname','basalforcings.deepwater_melting_rate','>=',0,'numel',1);
+				md = checkfield(md,'fieldname','basalforcings.deepwater_elevation','<','basalforcings.upperwater_elevation','numel',1);
+				md = checkfield(md,'fieldname','basalforcings.upperwater_elevation','<=',0,'numel',1);
+			end
+			if ismember('ThermalAnalysis',analyses) & ~(strcmp(solution,'TransientSolution') & md.transient.isthermal==0),
+				error('not implemented yet!');
+				md = checkfield(md,'fieldname','basalforcings.groundedice_melting_rate','NaN',1,'Inf',1,'timeseries',1);
+				md = checkfield(md,'fieldname','basalforcings.deepwater_melting_rate','>=',0,'numel',1);
+				md = checkfield(md,'fieldname','basalforcings.deepwater_elevation','<','basalforcings.upperwater_elevation','numel',1);
+				md = checkfield(md,'fieldname','basalforcings.upperwater_elevation','<',0,'numel',1);
+				md = checkfield(md,'fieldname','basalforcings.geothermalflux','NaN',1,'Inf',1,'timeseries',1,'>=',0);
+			end
+		end % }}}
+		function disp(self) % {{{
+			disp(sprintf('   basal forcings parameters:'));
+
+			fielddisplay(self,'groundedice_melting_rate','basal melting rate (positive if melting) [m/yr]');
+			fielddisplay(self,'deepwater_melting_rate','basal melting rate (positive if melting applied for floating ice whith base < deepwater_elevation) [m/yr]');
+			fielddisplay(self,'deepwater_elevation','elevation of ocean deepwater [m]');
+			fielddisplay(self,'upperwater_elevation','elevation of ocean upperwater [m]');
+			fielddisplay(self,'geothermalflux','geothermal heat flux [W/m^2]');
+
+		end % }}}
+		function marshall(self,prefix,md,fid) % {{{
+
+			yts=md.constants.yts;
+
+			floatingice_melting_rate=zeros(md.mesh.numberofvertices,1);
+			pos=find(md.geometry.base<=md.basalforcings.deepwater_elevation);
+			floatingice_melting_rate(pos)=md.basalforcings.deepwater_melting_rate(pos);
+			pos=find(md.geometry.base>md.basalforcings.deepwater_elevation & md.geometry.base<md.basalforcings.upperwater_elevation);
+			floatingice_melting_rate(pos)=md.basalforcings.deepwater_melting_rate(pos).*(md.geometry.base(pos)-md.basalforcings.upperwater_elevation(pos))./(md.basalforcings.deepwater_elevation(pos)-md.basalforcings.upperwater_elevation(pos));
+			WriteData(fid,prefix,'name','md.basalforcings.model','data',6,'format','Integer');
+			WriteData(fid,prefix,'data',floatingice_melting_rate,'format','DoubleMat','name','md.basalforcings.floatingice_melting_rate','mattype',1,'scale',1./yts,'timeserieslength',md.mesh.numberofvertices+1,'yts',md.constants.yts)
+			WriteData(fid,prefix,'object',self,'fieldname','groundedice_melting_rate','format','DoubleMat','name','md.basalforcings.groundedice_melting_rate','mattype',1,'scale',1./yts,'timeserieslength',md.mesh.numberofvertices+1,'yts',md.constants.yts)
+			WriteData(fid,prefix,'object',self,'fieldname','geothermalflux','name','md.basalforcings.geothermalflux','format','DoubleMat','mattype',1,'timeserieslength',md.mesh.numberofvertices+1,'yts',md.constants.yts);
+			WriteData(fid,prefix,'object',self,'fieldname','deepwater_melting_rate','format','DoubleMat','name','md.basalforcings.deepwater_melting_rate','scale',1./yts,'mattype',1)
+			WriteData(fid,prefix,'object',self,'fieldname','deepwater_elevation','format','DoubleMat','name','md.basalforcings.deepwater_elevation','mattype',1)
+			WriteData(fid,prefix,'object',self,'fieldname','upperwater_elevation','format','DoubleMat','name','md.basalforcings.upperwater_elevation','mattype',1)
+		end % }}}
+	end
+end
