Index: /issm/trunk-jpl/m4/issm_options.m4
===================================================================
--- /issm/trunk-jpl/m4/issm_options.m4	(revision 19634)
+++ /issm/trunk-jpl/m4/issm_options.m4	(revision 19635)
@@ -427,4 +427,5 @@
 	AC_MSG_RESULT($HAVE_DAKOTA)
 	AM_CONDITIONAL([DAKOTA],[test x$HAVE_DAKOTA = xyes])
+	ISSM_DAKOTA=no
 
 	dnl library and header files
@@ -452,8 +453,6 @@
 				if      test x$DAKOTA_VERSION = x4.2 || test x$DAKOTA_VERSION = x4.2+; then
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -ldakota -lteuchos -lpecos -lfftw3 -llhs -levidence -lsurfpack -lconmin -lddace -lfsudace -ljega -lcport -lopt -lpsuade -lnewmat -lncsuopt -lgsl -lquadrature -lcoliny -lcolin -lpebbl -lutilib -l3po -lnappspack -lappspack -lconveyor -lshared -lcdd -lamplsolver"
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 				else if test x$DAKOTA_VERSION = x5.1 || test x$DAKOTA_VERSION = x5.2; then
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -L$BOOST_ROOT/lib -ldakota -lteuchos -lpecos -llhs -lsparsegrid -lsurfpack -lconmin -lddace -lfsudace -ljega -lcport -loptpp -lpsuade -lncsuopt -lcolin -linterfaces -lmomh -lscolib -lpebbl -ltinyxml -lutilib -l3po -lhopspack -lnidr -lamplsolver -lboost_signals -lboost_regex -lboost_filesystem"
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 				else if test x$DAKOTA_VERSION = x6.1 || test x$DAKOTA_VERSION = x6.2; then
 				   DAKOTAFLAGS="-DDISABLE_DAKOTA_CONFIG_H -DBOOST_MULTI_INDEX_DISABLE_SERIALIZATION -DDAKOTA_PLUGIN -DBOOST_DISABLE_ASSERTS -DDAKOTA_HAVE_BOOST_FS -DHAVE_UNISTD_H -DHAVE_SYSTEM -DHAVE_WORKING_FORK -DHAVE_WORKING_VFORK -DHAVE_SYS_WAIT_H -DHAVE_USLEEP -DDAKOTA_F90 -DDAKOTA_HAVE_MPI -DHAVE_PECOS -DHAVE_SURFPACK -DDAKOTA_COLINY -DDAKOTA_UTILIB -DHAVE_ADAPTIVE_SAMPLING -DHAVE_CONMIN -DDAKOTA_DDACE -DHAVE_FSUDACE -DDAKOTA_HOPS -DHAVE_JEGA -DHAVE_NCSU -DHAVE_NL2SOL -DHAVE_OPTPP -DDAKOTA_OPTPP -DHAVE_PSUADE -DHAVE_AMPL"
@@ -461,5 +460,5 @@
 					AC_DEFINE([DISABLE_DAKOTA_CONFIG_H],[1],[disabling DAKOTA_CONFIG_H])
 					AC_DEFINE([DAKOTA_HAVE_MPI],[1],[enabling parallel MPI])
-					AM_CONDITIONAL([ISSM_DAKOTA],1)
+					ISSM_DAKOTA=yes
 				else
 					AC_MSG_ERROR([Dakota version not found or version ($DAKOTA_VERSION) not supported!]);
@@ -471,13 +470,10 @@
 				if      test x$DAKOTA_VERSION = x4.2 || test x$DAKOTA_VERSION = x4.2+; then
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -ldakota -lteuchos -lpecos -lfftw3 -llhs -levidence -lsurfpack -lconmin -lddace -lfsudace -ljega -lcport -lopt -lpsuade -lnewmat -lncsuopt -lgsl -lquadrature -lcoliny -lcolin -lpebbl -lutilib -l3po -lnappspack -lappspack -lconveyor -lshared -lcdd -lamplsolver"
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 				else if test x$DAKOTA_VERSION = x5.1 || test x$DAKOTA_VERSION = x5.2; then
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -ldakota -lteuchos -lpecos -llhs -lsparsegrid -lsurfpack -lconmin -lddace -lfsudace -ljega -lcport -loptpp -lpsuade -lncsuopt -lcolin -linterfaces -lmomh -lscolib -lpebbl -ltinyxml -lutilib -l3po -lhopspack -lnidr -lamplsolver -lboost_signals -lboost_regex -lboost_filesystem -lboost_system -ldl"
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 				else if test x$DAKOTA_VERSION = x5.3 || test x$DAKOTA_VERSION = x5.3.1; then
 					DAKOTAFLAGS="-DDISABLE_DAKOTA_CONFIG_H -DBOOST_MULTI_INDEX_DISABLE_SERIALIZATION -DDAKOTA_PLUGIN -DBOOST_DISABLE_ASSERTS -DDAKOTA_HAVE_BOOST_FS -DHAVE_UNISTD_H -DHAVE_SYSTEM -DHAVE_WORKING_FORK -DHAVE_WORKING_VFORK -DHAVE_SYS_WAIT_H -DHAVE_USLEEP -DDAKOTA_F90 -DDAKOTA_HAVE_MPI -DHAVE_PECOS -DHAVE_SURFPACK -DDAKOTA_COLINY -DDAKOTA_UTILIB -DHAVE_ADAPTIVE_SAMPLING -DHAVE_CONMIN -DDAKOTA_DDACE -DHAVE_FSUDACE -DDAKOTA_HOPS -DHAVE_JEGA -DHAVE_NCSU -DHAVE_NL2SOL -DHAVE_OPTPP -DDAKOTA_OPTPP -DHAVE_PSUADE -DHAVE_AMPL"
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -L$BOOST_ROOT/lib -ldakota_src -lpecos_src -lscolib -ljega_fe -llhs -lpebbl -lcolin -linterfaces -lmods -lmoga -loptpp -lsampling -lsoga -lsurfpack -lutilib -lconmin -ldakota_src_fortran -lmod -lncsuopt -lsurfpack_fortran -lteuchos -l3po -lamplsolver -lanalyzer -lbose -lcport -ldace -ldfftpack -leutils -lfsudace -lhopspack -ljega -lnidr -lpecos -lpsuade -lrandom -ltinyxml -lutilities -lsparsegrid -lboost_signals -lboost_regex -lboost_filesystem -lboost_system"
 					AC_DEFINE([DISABLE_DAKOTA_CONFIG_H],[1],[disabling DAKOTA_CONFIG_H])
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 				else if test x$DAKOTA_VERSION = x6.1 || test x$DAKOTA_VERSION = x6.2; then
 				   DAKOTAFLAGS="-DDISABLE_DAKOTA_CONFIG_H -DBOOST_MULTI_INDEX_DISABLE_SERIALIZATION -DDAKOTA_PLUGIN -DBOOST_DISABLE_ASSERTS -DDAKOTA_HAVE_BOOST_FS -DHAVE_UNISTD_H -DHAVE_SYSTEM -DHAVE_WORKING_FORK -DHAVE_WORKING_VFORK -DHAVE_SYS_WAIT_H -DHAVE_USLEEP -DDAKOTA_F90 -DDAKOTA_HAVE_MPI -DHAVE_PECOS -DHAVE_SURFPACK -DDAKOTA_COLINY -DDAKOTA_UTILIB -DHAVE_ADAPTIVE_SAMPLING -DHAVE_CONMIN -DDAKOTA_DDACE -DHAVE_FSUDACE -DDAKOTA_HOPS -DHAVE_JEGA -DHAVE_NCSU -DHAVE_NL2SOL -DHAVE_OPTPP -DDAKOTA_OPTPP -DHAVE_PSUADE -DHAVE_AMPL"
@@ -485,5 +481,5 @@
 					AC_DEFINE([DISABLE_DAKOTA_CONFIG_H],[1],[disabling DAKOTA_CONFIG_H])
 					AC_DEFINE([DAKOTA_HAVE_MPI],[1],[enabling parallel MPI])
-					AM_CONDITIONAL([ISSM_DAKOTA],1)
+					ISSM_DAKOTA=yes
 				else
 					AC_MSG_ERROR([Dakota version not found or version ($DAKOTA_VERSION) not supported!]);
@@ -496,16 +492,12 @@
 				if      test x$DAKOTA_VERSION = x4.2 || test x$DAKOTA_VERSION = x4.2+; then
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -ldakota -lteuchos -lpecos -lfftw3 -llhs -levidence -lsurfpack -lconmin -lddace -lfsudace -ljega -lcport -lopt -lpsuade -lnewmat -lncsuopt -lgsl -lquadrature -lcoliny -lcolin -lpebbl -lutilib -l3po -lnappspack -lappspack -lconveyor -lshared -lcdd -lamplsolver" 
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 					dnl DAKOTALIB+= "-lgslcblas -L/usr/lib -lblas -llapack"
 				else if test x$DAKOTA_VERSION = x5.1 || test x$DAKOTA_VERSION = x5.2; then
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -ldakota -lteuchos -lpecos -llhs -lsparsegrid -lsurfpack -lconmin -lddace -lfsudace -ljega -lcport -loptpp -lpsuade -lncsuopt -lcolin -linterfaces -lmomh -lscolib -lpebbl -ltinyxml -lutilib -l3po -lhopspack -lnidr -lamplsolver -lboost_signals -lboost_regex -lboost_filesystem -lboost_system"
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 					dnl DAKOTALIB+= "-lgslcblas -L/usr/lib -lblas -llapack"
 				else if test x$DAKOTA_VERSION = x5.3 || test x$DAKOTA_VERSION = x5.3.1; then
 					DAKOTAFLAGS="-DDISABLE_DAKOTA_CONFIG_H -DBOOST_MULTI_INDEX_DISABLE_SERIALIZATION -DDAKOTA_PLUGIN -DBOOST_DISABLE_ASSERTS -DDAKOTA_HAVE_BOOST_FS -DHAVE_UNISTD_H -DHAVE_SYSTEM -DHAVE_WORKING_FORK -DHAVE_WORKING_VFORK -DHAVE_SYS_WAIT_H -DHAVE_USLEEP -DDAKOTA_F90 -DDAKOTA_HAVE_MPI -DHAVE_PECOS -DHAVE_SURFPACK -DDAKOTA_COLINY -DDAKOTA_UTILIB -DHAVE_ADAPTIVE_SAMPLING -DHAVE_CONMIN -DDAKOTA_DDACE -DHAVE_FSUDACE -DDAKOTA_HOPS -DHAVE_JEGA -DHAVE_NCSU -DHAVE_NL2SOL -DHAVE_OPTPP -DDAKOTA_OPTPP -DHAVE_PSUADE -DHAVE_AMPL"
 					DAKOTALIB="-L$DAKOTA_ROOT/lib -L$BOOST_ROOT/lib -ldakota_src -lpecos_src -lscolib -ljega_fe -llhs -lpebbl -lcolin -linterfaces -lmods -lmoga -loptpp -lsampling -lsoga -lsurfpack -lutilib -lconmin -ldakota_src_fortran -lmod -lncsuopt -lsurfpack_fortran -lteuchos -l3po -lamplsolver -lanalyzer -lbose -lcport -ldace -ldfftpack -leutils -lfsudace -lhopspack -ljega -lnidr -lpecos -lpsuade -lrandom -ltinyxml -lutilities -lsparsegrid -lboost_signals -lboost_regex -lboost_filesystem -lboost_system"
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 					AC_DEFINE([DISABLE_DAKOTA_CONFIG_H],[1],[disabling DAKOTA_CONFIG_H])
-					AM_CONDITIONAL([ISSM_DAKOTA],0)
 				else if test x$DAKOTA_VERSION = x6.1 || test x$DAKOTA_VERSION = x6.2; then
 				   DAKOTAFLAGS="-DDISABLE_DAKOTA_CONFIG_H -DBOOST_MULTI_INDEX_DISABLE_SERIALIZATION -DDAKOTA_PLUGIN -DBOOST_DISABLE_ASSERTS -DDAKOTA_HAVE_BOOST_FS -DHAVE_UNISTD_H -DHAVE_SYSTEM -DHAVE_WORKING_FORK -DHAVE_WORKING_VFORK -DHAVE_SYS_WAIT_H -DHAVE_USLEEP -DDAKOTA_F90 -DDAKOTA_HAVE_MPI -DHAVE_PECOS -DHAVE_SURFPACK -DDAKOTA_COLINY -DDAKOTA_UTILIB -DHAVE_ADAPTIVE_SAMPLING -DHAVE_CONMIN -DDAKOTA_DDACE -DHAVE_FSUDACE -DDAKOTA_HOPS -DHAVE_JEGA -DHAVE_NCSU -DHAVE_NL2SOL -DHAVE_OPTPP -DDAKOTA_OPTPP -DHAVE_PSUADE -DHAVE_AMPL -Wno-deprecated-register -Wno-return-type"
@@ -513,5 +505,4 @@
 					AC_DEFINE([DISABLE_DAKOTA_CONFIG_H],[1],[disabling DAKOTA_CONFIG_H])
 					AC_DEFINE([DAKOTA_HAVE_MPI],[1],[enabling parallel MPI])
-					AM_CONDITIONAL([ISSM_DAKOTA],1)
 				else
 					AC_MSG_ERROR([Dakota version not found or version ($DAKOTA_VERSION) not supported!]);
@@ -558,4 +549,6 @@
 		AC_SUBST([DAKOTALIB])
 	fi
+
+	AM_CONDITIONAL([ISSM_DAKOTA],[test x$ISSM_DAKOTA = xyes])
 	dnl }}}
 	dnl python{{{