Index: issm/trunk-jpl/m4/analyses.m4
===================================================================
--- issm/trunk-jpl/m4/analyses.m4	(revision 17775)
+++ issm/trunk-jpl/m4/analyses.m4	(revision 17776)
@@ -1,414 +1,433 @@
+
+dnl   WARNING: DO NOT MODIFY THIS FILE
+dnl            this file has been automatically generated by Synchronize.sh
+dnl            Please read README for more information
+
 # AX_ANALYSES_SELECTION
 # -----------------
 # Check for analyses compilation
 AC_DEFUN([AX_ANALYSES_SELECTION],
-			[
-	dnl with-AdjointBalancethickness{{{
-	AC_ARG_WITH([AdjointBalancethickness],
-		AS_HELP_STRING([--with-AdjointBalancethickness = YES], [compile with AdjointBalancethickness capabilities (default is yes)]),
-		[ADJOINTBALANCETHICKNESS=$withval],[ADJOINTBALANCETHICKNESS=yes]) 
-	AC_MSG_CHECKING(for AdjointBalancethickness capability compilation)
-
-	HAVE_ADJOINTBALANCETHICKNESS=no
-	if test "x$ADJOINTBALANCETHICKNESS" = "xyes"; then
-		HAVE_ADJOINTBALANCETHICKNESS=yes
-		AC_DEFINE([_HAVE_ADJOINTBALANCETHICKNESS_],[1],[with AdjointBalancethickness capability])
-	fi
-	AM_CONDITIONAL([ADJOINTBALANCETHICKNESS], [test x$HAVE_ADJOINTBALANCETHICKNESS = xyes])
-	AC_MSG_RESULT($HAVE_ADJOINTBALANCETHICKNESS)
-	dnl }}}
-	dnl with-AdjointHoriz{{{
-	AC_ARG_WITH([AdjointHoriz],
-		AS_HELP_STRING([--with-AdjointHoriz = YES], [compile with AdjointHoriz capabilities (default is yes)]),
-		[ADJOINTHORIZ=$withval],[ADJOINTHORIZ=yes]) 
-	AC_MSG_CHECKING(for AdjointHoriz capability compilation)
-
-	HAVE_ADJOINTHORIZ=no
-	if test "x$ADJOINTHORIZ" = "xyes"; then
-		HAVE_ADJOINTHORIZ=yes
-		AC_DEFINE([_HAVE_ADJOINTHORIZ_],[1],[with AdjointHoriz capability])
-	fi
-	AM_CONDITIONAL([ADJOINTHORIZ], [test x$HAVE_ADJOINTHORIZ = xyes])
-	AC_MSG_RESULT($HAVE_ADJOINTHORIZ)
-	dnl }}}
-	dnl with-Balancethickness{{{
-	AC_ARG_WITH([Balancethickness],
-		AS_HELP_STRING([--with-Balancethickness = YES], [compile with Balancethickness capabilities (default is yes)]),
-		[BALANCETHICKNESS=$withval],[BALANCETHICKNESS=yes]) 
-	AC_MSG_CHECKING(for Balancethickness capability compilation)
-
-	HAVE_BALANCETHICKNESS=no
-	if test "x$BALANCETHICKNESS" = "xyes"; then
-		HAVE_BALANCETHICKNESS=yes
-		AC_DEFINE([_HAVE_BALANCETHICKNESS_],[1],[with Balancethickness capability])
-	fi
-	AM_CONDITIONAL([BALANCETHICKNESS], [test x$HAVE_BALANCETHICKNESS = xyes])
-	AC_MSG_RESULT($HAVE_BALANCETHICKNESS)
-	dnl }}}
-	dnl with-BalancethicknessSoft{{{
-	AC_ARG_WITH([BalancethicknessSoft],
-		AS_HELP_STRING([--with-BalancethicknessSoft = YES], [compile with BalancethicknessSoft capabilities (default is yes)]),
-		[BALANCETHICKNESSSOFT=$withval],[BALANCETHICKNESSSOFT=yes]) 
-	AC_MSG_CHECKING(for BalancethicknessSoft capability compilation)
-
-	HAVE_BALANCETHICKNESSSOFT=no
-	if test "x$BALANCETHICKNESSSOFT" = "xyes"; then
-		HAVE_BALANCETHICKNESSSOFT=yes
-		AC_DEFINE([_HAVE_BALANCETHICKNESSSOFT_],[1],[with BalancethicknessSoft capability])
-	fi
-	AM_CONDITIONAL([BALANCETHICKNESSSOFT], [test x$HAVE_BALANCETHICKNESSSOFT = xyes])
-	AC_MSG_RESULT($HAVE_BALANCETHICKNESSSOFT)
-	dnl }}}
-	dnl with-Balancevelocity{{{
-	AC_ARG_WITH([Balancevelocity],
-		AS_HELP_STRING([--with-Balancevelocity = YES], [compile with Balancevelocity capabilities (default is yes)]),
-		[BALANCEVELOCITY=$withval],[BALANCEVELOCITY=yes]) 
-	AC_MSG_CHECKING(for Balancevelocity capability compilation)
-
-	HAVE_BALANCEVELOCITY=no
-	if test "x$BALANCEVELOCITY" = "xyes"; then
-		HAVE_BALANCEVELOCITY=yes
-		AC_DEFINE([_HAVE_BALANCEVELOCITY_],[1],[with Balancevelocity capability])
-	fi
-	AM_CONDITIONAL([BALANCEVELOCITY], [test x$HAVE_BALANCEVELOCITY = xyes])
-	AC_MSG_RESULT($HAVE_BALANCEVELOCITY)
-	dnl }}}
-	dnl with-L2ProjectionEPL{{{
-	AC_ARG_WITH([L2ProjectionEPL],
-		AS_HELP_STRING([--with-L2ProjectionEPL = YES], [compile with L2ProjectionEPL capabilities (default is yes)]),
-		[L2PROJECTIONEPL=$withval],[L2PROJECTIONEPL=yes]) 
-	AC_MSG_CHECKING(for L2ProjectionEPL capability compilation)
-
-	HAVE_L2PROJECTIONEPL=no
-	if test "x$L2PROJECTIONEPL" = "xyes"; then
-		HAVE_L2PROJECTIONEPL=yes
-		AC_DEFINE([_HAVE_L2PROJECTIONEPL_],[1],[with L2ProjectionEPL capability])
-	fi
-	AM_CONDITIONAL([L2PROJECTIONEPL], [test x$HAVE_L2PROJECTIONEPL = xyes])
-	AC_MSG_RESULT($HAVE_L2PROJECTIONEPL)
-	dnl }}}
-	dnl with-L2ProjectionBase{{{
-	AC_ARG_WITH([L2ProjectionBase],
-		AS_HELP_STRING([--with-L2ProjectionBase = YES], [compile with L2ProjectionBase capabilities (default is yes)]),
-		[L2PROJECTIONBASE=$withval],[L2PROJECTIONBASE=yes]) 
-	AC_MSG_CHECKING(for L2ProjectionBase capability compilation)
-
-	HAVE_L2PROJECTIONBASE=no
-	if test "x$L2PROJECTIONBASE" = "xyes"; then
-		HAVE_L2PROJECTIONBASE=yes
-		AC_DEFINE([_HAVE_L2PROJECTIONBASE_],[1],[with L2ProjectionBase capability])
-	fi
-	AM_CONDITIONAL([L2PROJECTIONBASE], [test x$HAVE_L2PROJECTIONBASE = xyes])
-	AC_MSG_RESULT($HAVE_L2PROJECTIONBASE)
-	dnl }}}
-	dnl with-DamageEvolution{{{
-	AC_ARG_WITH([DamageEvolution],
-		AS_HELP_STRING([--with-DamageEvolution = YES], [compile with DamageEvolution capabilities (default is yes)]),
-		[DAMAGEEVOLUTION=$withval],[DAMAGEEVOLUTION=yes]) 
-	AC_MSG_CHECKING(for DamageEvolution capability compilation)
-
-	HAVE_DAMAGEEVOLUTION=no
-	if test "x$DAMAGEEVOLUTION" = "xyes"; then
-		HAVE_DAMAGEEVOLUTION=yes
-		AC_DEFINE([_HAVE_DAMAGEEVOLUTION_],[1],[with DamageEvolution capability])
-	fi
-	AM_CONDITIONAL([DAMAGEEVOLUTION], [test x$HAVE_DAMAGEEVOLUTION = xyes])
-	AC_MSG_RESULT($HAVE_DAMAGEEVOLUTION)
-	dnl }}}
-	dnl with-DepthAverage{{{
-	AC_ARG_WITH([DepthAverage],
-		AS_HELP_STRING([--with-DepthAverage = YES], [compile with DepthAverage capabilities (default is yes)]),
-		[DEPTHAVERAGE=$withval],[DEPTHAVERAGE=yes]) 
-	AC_MSG_CHECKING(for DepthAverage capability compilation)
-
-	HAVE_DEPTHAVERAGE=no
-	if test "x$DEPTHAVERAGE" = "xyes"; then
-		HAVE_DEPTHAVERAGE=yes
-		AC_DEFINE([_HAVE_DEPTHAVERAGE_],[1],[with DepthAverage capability])
-	fi
-	AM_CONDITIONAL([DEPTHAVERAGE], [test x$HAVE_DEPTHAVERAGE = xyes])
-	AC_MSG_RESULT($HAVE_DEPTHAVERAGE)
-	dnl }}}
-	dnl with-stressbalance{{{
-	AC_ARG_WITH([stressbalance],
-		AS_HELP_STRING([--with-stressbalance = YES], [compile with stressbalance capabilities (default is yes)]),
-		[STRESSBALANCE=$withval],[STRESSBALANCE=yes]) 
-	AC_MSG_CHECKING(for stressbalance capability compilation)
-
-	HAVE_STRESSBALANCE=no
-	if test "x$STRESSBALANCE" = "xyes"; then
-		HAVE_STRESSBALANCE=yes
-		AC_DEFINE([_HAVE_STRESSBALANCE_],[1],[with stressbalance capability])
-	fi
-	AM_CONDITIONAL([STRESSBALANCE], [test x$HAVE_STRESSBALANCE = xyes])
-	AC_MSG_RESULT($HAVE_STRESSBALANCE)
-	dnl }}}
-	dnl with-stressbalanceSIA{{{
-		AC_ARG_WITH([stressbalanceSIA],
-					AS_HELP_STRING([--with-stressbalanceSIA = YES], [compile with stressbalanceSIA capabilities (default is yes)]),
-					[STRESSBALANCESIA=$withval],[STRESSBALANCESIA=yes]) 
-		  AC_MSG_CHECKING(for stressbalanceSIA capability compilation)
-
-		  HAVE_STRESSBALANCESIA=no
-		  if test "x$STRESSBALANCESIA" = "xyes"; then
-			HAVE_STRESSBALANCESIA=yes
-			  AC_DEFINE([_HAVE_STRESSBALANCESIA_],[1],[with stressbalanceSIA capability])
-			  fi
-			  AM_CONDITIONAL([STRESSBALANCESIA], [test x$HAVE_STRESSBALANCESIA = xyes])
-			  AC_MSG_RESULT($HAVE_STRESSBALANCESIA)
-			  dnl }}}
-	dnl with-StressbalanceVertical{{{
-	AC_ARG_WITH([StressbalanceVertical],
-		AS_HELP_STRING([--with-StressbalanceVertical = YES], [compile with StressbalanceVertical capabilities (default is yes)]),
-		[STRESSBALANCEVERTICAL=$withval],[STRESSBALANCEVERTICAL=yes]) 
-	AC_MSG_CHECKING(for StressbalanceVertical capability compilation)
-
-	HAVE_STRESSBALANCEVERTICAL=no
-	if test "x$STRESSBALANCEVERTICAL" = "xyes"; then
-		HAVE_STRESSBALANCEVERTICAL=yes
-		AC_DEFINE([_HAVE_STRESSBALANCEVERTICAL_],[1],[with StressbalanceVertical capability])
-	fi
-	AM_CONDITIONAL([STRESSBALANCEVERTICAL], [test x$HAVE_STRESSBALANCEVERTICAL = xyes])
-	AC_MSG_RESULT($HAVE_STRESSBALANCEVERTICAL)
-	dnl }}}
-	dnl with-Enthalpy{{{
-	AC_ARG_WITH([Enthalpy],
-		AS_HELP_STRING([--with-Enthalpy = YES], [compile with Enthalpy capabilities (default is yes)]),
-		[ENTHALPY=$withval],[ENTHALPY=yes]) 
-	AC_MSG_CHECKING(for Enthalpy capability compilation)
-
-	HAVE_ENTHALPY=no
-	if test "x$ENTHALPY" = "xyes"; then
-		HAVE_ENTHALPY=yes
-		AC_DEFINE([_HAVE_ENTHALPY_],[1],[with Enthalpy capability])
-	fi
-	AM_CONDITIONAL([ENTHALPY], [test x$HAVE_ENTHALPY = xyes])
-	AC_MSG_RESULT($HAVE_ENTHALPY)
-	dnl }}}
-	dnl with-HydrologyShreve{{{
-	AC_ARG_WITH([HydrologyShreve],
-		AS_HELP_STRING([--with-HydrologyShreve = YES], [compile with HydrologyShreve capabilities (default is yes)]),
-		[HYDROLOGYSHREVE=$withval],[HYDROLOGYSHREVE=yes]) 
-	AC_MSG_CHECKING(for HydrologyShreve capability compilation)
-
-	HAVE_HYDROLOGYSHREVE=no
-	if test "x$HYDROLOGYSHREVE" = "xyes"; then
-		HAVE_HYDROLOGYSHREVE=yes
-		AC_DEFINE([_HAVE_HYDROLOGYSHREVE_],[1],[with HydrologyShreve capability])
-	fi
-	AM_CONDITIONAL([HYDROLOGYSHREVE], [test x$HAVE_HYDROLOGYSHREVE = xyes])
-	AC_MSG_RESULT($HAVE_HYDROLOGYSHREVE)
-	dnl }}}
-	dnl with-HydrologyDCInefficient{{{
-	AC_ARG_WITH([HydrologyDCInefficient],
-		AS_HELP_STRING([--with-HydrologyDCInefficient = YES], [compile with HydrologyDCInefficient capabilities (default is yes)]),
-		[HYDROLOGYDCINEFFICIENT=$withval],[HYDROLOGYDCINEFFICIENT=yes]) 
-	AC_MSG_CHECKING(for HydrologyDCInefficient capability compilation)
-
-	HAVE_HYDROLOGYDCINEFFICIENT=no
-	if test "x$HYDROLOGYDCINEFFICIENT" = "xyes"; then
-		HAVE_HYDROLOGYDCINEFFICIENT=yes
-		AC_DEFINE([_HAVE_HYDROLOGYDCINEFFICIENT_],[1],[with HydrologyDCInefficient capability])
-	fi
-	AM_CONDITIONAL([HYDROLOGYDCINEFFICIENT], [test x$HAVE_HYDROLOGYDCINEFFICIENT = xyes])
-	AC_MSG_RESULT($HAVE_HYDROLOGYDCINEFFICIENT)
-	dnl }}}
-	dnl with-HydrologyDCEfficient{{{
-	AC_ARG_WITH([HydrologyDCEfficient],
-		AS_HELP_STRING([--with-HydrologyDCEfficient = YES], [compile with HydrologyDCEfficient capabilities (default is yes)]),
-		[HYDROLOGYDCEFFICIENT=$withval],[HYDROLOGYDCEFFICIENT=yes]) 
-	AC_MSG_CHECKING(for HydrologyDCEfficient capability compilation)
-
-	HAVE_HYDROLOGYDCEFFICIENT=no
-	if test "x$HYDROLOGYDCEFFICIENT" = "xyes"; then
-		HAVE_HYDROLOGYDCEFFICIENT=yes
-		AC_DEFINE([_HAVE_HYDROLOGYDCEFFICIENT_],[1],[with HydrologyDCEfficient capability])
-	fi
-	AM_CONDITIONAL([HYDROLOGYDCEFFICIENT], [test x$HAVE_HYDROLOGYDCEFFICIENT = xyes])
-	AC_MSG_RESULT($HAVE_HYDROLOGYDCEFFICIENT)
-	dnl }}}
-	dnl with-Melting{{{
-	AC_ARG_WITH([Melting],
-		AS_HELP_STRING([--with-Melting = YES], [compile with Melting capabilities (default is yes)]),
-		[MELTING=$withval],[MELTING=yes]) 
-	AC_MSG_CHECKING(for Melting capability compilation)
-
-	HAVE_MELTING=no
-	if test "x$MELTING" = "xyes"; then
-		HAVE_MELTING=yes
-		AC_DEFINE([_HAVE_MELTING_],[1],[with Melting capability])
-	fi
-	AM_CONDITIONAL([MELTING], [test x$HAVE_MELTING = xyes])
-	AC_MSG_RESULT($HAVE_MELTING)
-	dnl }}}
-	dnl with-Masstransport{{{
-	AC_ARG_WITH([Masstransport],
-		AS_HELP_STRING([--with-Masstransport = YES], [compile with Masstransport capabilities (default is yes)]),
-		[MASSTRANSPORT=$withval],[MASSTRANSPORT=yes]) 
-	AC_MSG_CHECKING(for Masstransport capability compilation)
-
-	HAVE_MASSTRANSPORT=no
-	if test "x$MASSTRANSPORT" = "xyes"; then
-		HAVE_MASSTRANSPORT=yes
-		AC_DEFINE([_HAVE_MASSTRANSPORT_],[1],[with Masstransport capability])
-	fi
-	AM_CONDITIONAL([MASSTRANSPORT], [test x$HAVE_MASSTRANSPORT = xyes])
-	AC_MSG_RESULT($HAVE_MASSTRANSPORT)
-	dnl }}}
-	dnl with-FreeSurfaceBase{{{
-	AC_ARG_WITH([FreeSurfaceBase],
-		AS_HELP_STRING([--with-FreeSurfaceBase = YES], [compile with FreeSurfaceBase capabilities (default is yes)]),
-		[FREESURFACEBASE=$withval],[FREESURFACEBASE=yes]) 
-	AC_MSG_CHECKING(for FreeSurfaceBase capability compilation)
-
-	HAVE_FREESURFACEBASE=no
-	if test "x$FREESURFACEBASE" = "xyes"; then
-		HAVE_FREESURFACEBASE=yes
-		AC_DEFINE([_HAVE_FREESURFACEBASE_],[1],[with FreeSurfaceBase capability])
-	fi
-	AM_CONDITIONAL([FREESURFACEBASE], [test x$HAVE_FREESURFACEBASE = xyes])
-	AC_MSG_RESULT($HAVE_FREESURFACEBASE)
-	dnl }}}
-	dnl with-FreeSurfaceTop{{{
-		AC_ARG_WITH([FreeSurfaceTop],
-					AS_HELP_STRING([--with-FreeSurfaceTop = YES], [compile with FreeSurfaceTop capabilities (default is yes)]),
-					[FREESURFACETOP=$withval],[FREESURFACETOP=yes]) 
-		  AC_MSG_CHECKING(for FreeSurfaceTop capability compilation)
-
-		  HAVE_FREESURFACETOP=no
-		  if test "x$FREESURFACETOP" = "xyes"; then
-			HAVE_FREESURFACETOP=yes
-			  AC_DEFINE([_HAVE_FREESURFACETOP_],[1],[with FreeSurfaceTop capability])
-			  fi
-			  AM_CONDITIONAL([FREESURFACETOP], [test x$HAVE_FREESURFACETOP = xyes])
-			  AC_MSG_RESULT($HAVE_FREESURFACETOP)
-			  dnl }}}
-	dnl with-ExtrudeFromBase{{{
-	AC_ARG_WITH([ExtrudeFromBase],
-		AS_HELP_STRING([--with-ExtrudeFromBase = YES], [compile with ExtrudeFromBase capabilities (default is yes)]),
-		[EXTRUDEFROMBASE=$withval],[EXTRUDEFROMBASE=yes]) 
-	AC_MSG_CHECKING(for ExtrudeFromBase capability compilation)
-
-	HAVE_EXTRUDEFROMBASE=no
-	if test "x$EXTRUDEFROMBASE" = "xyes"; then
-		HAVE_EXTRUDEFROMBASE=yes
-		AC_DEFINE([_HAVE_EXTRUDEFROMBASE_],[1],[with ExtrudeFromBase capability])
-	fi
-	AM_CONDITIONAL([EXTRUDEFROMBASE], [test x$HAVE_EXTRUDEFROMBASE = xyes])
-	AC_MSG_RESULT($HAVE_EXTRUDEFROMBASE)
-	dnl }}}
-	dnl with-ExtrudeFromTop{{{
-		AC_ARG_WITH([ExtrudeFromTop],
-					AS_HELP_STRING([--with-ExtrudeFromTop = YES], [compile with ExtrudeFromTop capabilities (default is yes)]),
-					[EXTRUDEFROMTOP=$withval],[EXTRUDEFROMTOP=yes]) 
-		  AC_MSG_CHECKING(for ExtrudeFromTop capability compilation)
-
-		  HAVE_EXTRUDEFROMTOP=no
-		  if test "x$EXTRUDEFROMTOP" = "xyes"; then
-			HAVE_EXTRUDEFROMTOP=yes
-			  AC_DEFINE([_HAVE_EXTRUDEFROMTOP_],[1],[with ExtrudeFromTop capability])
-			  fi
-			  AM_CONDITIONAL([EXTRUDEFROMTOP], [test x$HAVE_EXTRUDEFROMTOP = xyes])
-			  AC_MSG_RESULT($HAVE_EXTRUDEFROMTOP)
-			  dnl }}}
-	dnl with-Thermal{{{
-	AC_ARG_WITH([Thermal],
-		AS_HELP_STRING([--with-Thermal = YES], [compile with Thermal capabilities (default is yes)]),
-		[THERMAL=$withval],[THERMAL=yes]) 
-	AC_MSG_CHECKING(for Thermal capability compilation)
-
-	HAVE_THERMAL=no
-	if test "x$THERMAL" = "xyes"; then
-		HAVE_THERMAL=yes
-		AC_DEFINE([_HAVE_THERMAL_],[1],[with Thermal capability])
-	fi
-	AM_CONDITIONAL([THERMAL], [test x$HAVE_THERMAL = xyes])
-	AC_MSG_RESULT($HAVE_THERMAL)
-	dnl }}}
-	dnl with-SmoothedSurfaceSlopeX{{{
-	AC_ARG_WITH([SmoothedSurfaceSlopeX],
-		AS_HELP_STRING([--with-SmoothedSurfaceSlopeX = YES], [compile with SmoothedSurfaceSlopeX capabilities (default is yes)]),
-		[SMOOTHEDSURFACESLOPEX=$withval],[SMOOTHEDSURFACESLOPEX=yes]) 
-	AC_MSG_CHECKING(for SmoothedSurfaceSlopeX capability compilation)
-
-	HAVE_SMOOTHEDSURFACESLOPEX=no
-	if test "x$SMOOTHEDSURFACESLOPEX" = "xyes"; then
-		HAVE_SMOOTHEDSURFACESLOPEX=yes
-		AC_DEFINE([_HAVE_SMOOTHEDSURFACESLOPEX_],[1],[with SmoothedSurfaceSlopeX capability])
-	fi
-	AM_CONDITIONAL([SMOOTHEDSURFACESLOPEX], [test x$HAVE_SMOOTHEDSURFACESLOPEX = xyes])
-	AC_MSG_RESULT($HAVE_SMOOTHEDSURFACESLOPEX)
-	dnl }}}
-	dnl with-SmoothedSurfaceSlopeY{{{
-	AC_ARG_WITH([SmoothedSurfaceSlopeY],
-		AS_HELP_STRING([--with-SmoothedSurfaceSlopeY = YES], [compile with SmoothedSurfaceSlopeY capabilities (default is yes)]),
-		[SMOOTHEDSURFACESLOPEY=$withval],[SMOOTHEDSURFACESLOPEY=yes]) 
-	AC_MSG_CHECKING(for SmoothedSurfaceSlopeY capability compilation)
-
-	HAVE_SMOOTHEDSURFACESLOPEY=no
-	if test "x$SMOOTHEDSURFACESLOPEY" = "xyes"; then
-		HAVE_SMOOTHEDSURFACESLOPEY=yes
-		AC_DEFINE([_HAVE_SMOOTHEDSURFACESLOPEY_],[1],[with SmoothedSurfaceSlopeY capability])
-	fi
-	AM_CONDITIONAL([SMOOTHEDSURFACESLOPEY], [test x$HAVE_SMOOTHEDSURFACESLOPEY = xyes])
-	AC_MSG_RESULT($HAVE_SMOOTHEDSURFACESLOPEY)
-	dnl }}}
-	dnl with-Meshdeformation{{{
-	AC_ARG_WITH([Meshdeformation],
-		AS_HELP_STRING([--with-Meshdeformation = YES], [compile with Meshdeformation capabilities (default is yes)]),
-		[MESHDEFORMATION=$withval],[MESHDEFORMATION=yes]) 
-	AC_MSG_CHECKING(for Meshdeformation capability compilation)
-
-	HAVE_MESHDEFORMATION=no
-	if test "x$MESHDEFORMATION" = "xyes"; then
-		HAVE_MESHDEFORMATION=yes
-		AC_DEFINE([_HAVE_MESHDEFORMATION_],[1],[with Meshdeformation capability])
-	fi
-	AM_CONDITIONAL([MESHDEFORMATION], [test x$HAVE_MESHDEFORMATION = xyes])
-	AC_MSG_RESULT($HAVE_MESHDEFORMATION)
-	dnl }}}
-	dnl with-Levelset{{{
-	AC_ARG_WITH([Levelset],
-		AS_HELP_STRING([--with-Levelset = YES], [compile with Levelset capabilities (default is yes)]),
-		[LEVELSET=$withval],[LEVELSET=yes]) 
-	AC_MSG_CHECKING(for Levelset capability compilation)
-
-	HAVE_LEVELSET=no
-	if test "x$LEVELSET" = "xyes"; then
-		HAVE_LEVELSET=yes
-		AC_DEFINE([_HAVE_LEVELSET_],[1],[with Levelset capability])
-	fi
-	AM_CONDITIONAL([LEVELSET], [test x$HAVE_LEVELSET = xyes])
-	AC_MSG_RESULT($HAVE_LEVELSET)
-	dnl }}}
-	dnl with-Extrapolation{{{
-	AC_ARG_WITH([Extrapolation],
-		AS_HELP_STRING([--with-Extrapolation = YES], [compile with Extrapolation capabilities (default is yes)]),
-		[EXTRAPOLATION=$withval],[EXTRAPOLATION=yes]) 
-	AC_MSG_CHECKING(for Extrapolation capability compilation)
-
-	HAVE_EXTRAPOLATION=no
-	if test "x$EXTRAPOLATION" = "xyes"; then
-		HAVE_EXTRAPOLATION=yes
-		AC_DEFINE([_HAVE_EXTRAPOLATION_],[1],[with Extrapolation capability])
-	fi
-	AM_CONDITIONAL([EXTRAPOLATION], [test x$HAVE_EXTRAPOLATION = xyes])
-	AC_MSG_RESULT($HAVE_EXTRAPOLATION)
-	dnl }}}
-	dnl with-LsfReinitialization{{{
-	AC_ARG_WITH([LsfReinitialization],
-		AS_HELP_STRING([--with-LsfReinitialization = YES], [compile with LsfReinitialization capabilities (default is yes)]),
-		[LSFREINITIALIZATION=$withval],[LSFREINITIALIZATION=yes]) 
-	AC_MSG_CHECKING(for LsfReinitialization capability compilation)
-
-	HAVE_LSFREINITIALIZATION=no
-	if test "x$LSFREINITIALIZATION" = "xyes"; then
-		HAVE_LSFREINITIALIZATION=yes
-		AC_DEFINE([_HAVE_LSFREINITIALIZATION_],[1],[with LsfReinitialization capability])
-	fi
-	AM_CONDITIONAL([LSFREINITIALIZATION], [test x$HAVE_LSFREINITIALIZATION = xyes])
-	AC_MSG_RESULT($HAVE_LSFREINITIALIZATION)
-	dnl }}}
-
+[
+
+dnl with-AdjointBalancethickness{{{
+AC_ARG_WITH([AdjointBalancethickness],
+	AS_HELP_STRING([--with-AdjointBalancethickness = YES], [compile with AdjointBalancethickness capabilities (default is yes)]),
+	[ADJOINTBALANCETHICKNESS=$withval],[ADJOINTBALANCETHICKNESS=yes])
+AC_MSG_CHECKING(for AdjointBalancethickness capability compilation)
+
+HAVE_ADJOINTBALANCETHICKNESS=no 
+if test "x$ADJOINTBALANCETHICKNESS" = "xyes"; then
+	HAVE_ADJOINTBALANCETHICKNESS=yes
+	AC_DEFINE([_HAVE_ADJOINTBALANCETHICKNESS_],[1],[with AdjointBalancethicknesscapability])
+fi
+AM_CONDITIONAL([ADJOINTBALANCETHICKNESS], [test x$HAVE_ADJOINTBALANCETHICKNESS = xyes])
+AC_MSG_RESULT($HAVE_ADJOINTBALANCETHICKNESS)
+dnl }}}
+dnl with-AdjointHoriz{{{
+AC_ARG_WITH([AdjointHoriz],
+	AS_HELP_STRING([--with-AdjointHoriz = YES], [compile with AdjointHoriz capabilities (default is yes)]),
+	[ADJOINTHORIZ=$withval],[ADJOINTHORIZ=yes])
+AC_MSG_CHECKING(for AdjointHoriz capability compilation)
+
+HAVE_ADJOINTHORIZ=no 
+if test "x$ADJOINTHORIZ" = "xyes"; then
+	HAVE_ADJOINTHORIZ=yes
+	AC_DEFINE([_HAVE_ADJOINTHORIZ_],[1],[with AdjointHorizcapability])
+fi
+AM_CONDITIONAL([ADJOINTHORIZ], [test x$HAVE_ADJOINTHORIZ = xyes])
+AC_MSG_RESULT($HAVE_ADJOINTHORIZ)
+dnl }}}
+dnl with-Balancethickness{{{
+AC_ARG_WITH([Balancethickness],
+	AS_HELP_STRING([--with-Balancethickness = YES], [compile with Balancethickness capabilities (default is yes)]),
+	[BALANCETHICKNESS=$withval],[BALANCETHICKNESS=yes])
+AC_MSG_CHECKING(for Balancethickness capability compilation)
+
+HAVE_BALANCETHICKNESS=no 
+if test "x$BALANCETHICKNESS" = "xyes"; then
+	HAVE_BALANCETHICKNESS=yes
+	AC_DEFINE([_HAVE_BALANCETHICKNESS_],[1],[with Balancethicknesscapability])
+fi
+AM_CONDITIONAL([BALANCETHICKNESS], [test x$HAVE_BALANCETHICKNESS = xyes])
+AC_MSG_RESULT($HAVE_BALANCETHICKNESS)
+dnl }}}
+dnl with-BalancethicknessSoft{{{
+AC_ARG_WITH([BalancethicknessSoft],
+	AS_HELP_STRING([--with-BalancethicknessSoft = YES], [compile with BalancethicknessSoft capabilities (default is yes)]),
+	[BALANCETHICKNESSSOFT=$withval],[BALANCETHICKNESSSOFT=yes])
+AC_MSG_CHECKING(for BalancethicknessSoft capability compilation)
+
+HAVE_BALANCETHICKNESSSOFT=no 
+if test "x$BALANCETHICKNESSSOFT" = "xyes"; then
+	HAVE_BALANCETHICKNESSSOFT=yes
+	AC_DEFINE([_HAVE_BALANCETHICKNESSSOFT_],[1],[with BalancethicknessSoftcapability])
+fi
+AM_CONDITIONAL([BALANCETHICKNESSSOFT], [test x$HAVE_BALANCETHICKNESSSOFT = xyes])
+AC_MSG_RESULT($HAVE_BALANCETHICKNESSSOFT)
+dnl }}}
+dnl with-Balancevelocity{{{
+AC_ARG_WITH([Balancevelocity],
+	AS_HELP_STRING([--with-Balancevelocity = YES], [compile with Balancevelocity capabilities (default is yes)]),
+	[BALANCEVELOCITY=$withval],[BALANCEVELOCITY=yes])
+AC_MSG_CHECKING(for Balancevelocity capability compilation)
+
+HAVE_BALANCEVELOCITY=no 
+if test "x$BALANCEVELOCITY" = "xyes"; then
+	HAVE_BALANCEVELOCITY=yes
+	AC_DEFINE([_HAVE_BALANCEVELOCITY_],[1],[with Balancevelocitycapability])
+fi
+AM_CONDITIONAL([BALANCEVELOCITY], [test x$HAVE_BALANCEVELOCITY = xyes])
+AC_MSG_RESULT($HAVE_BALANCEVELOCITY)
+dnl }}}
+dnl with-L2ProjectionEPL{{{
+AC_ARG_WITH([L2ProjectionEPL],
+	AS_HELP_STRING([--with-L2ProjectionEPL = YES], [compile with L2ProjectionEPL capabilities (default is yes)]),
+	[L2PROJECTIONEPL=$withval],[L2PROJECTIONEPL=yes])
+AC_MSG_CHECKING(for L2ProjectionEPL capability compilation)
+
+HAVE_L2PROJECTIONEPL=no 
+if test "x$L2PROJECTIONEPL" = "xyes"; then
+	HAVE_L2PROJECTIONEPL=yes
+	AC_DEFINE([_HAVE_L2PROJECTIONEPL_],[1],[with L2ProjectionEPLcapability])
+fi
+AM_CONDITIONAL([L2PROJECTIONEPL], [test x$HAVE_L2PROJECTIONEPL = xyes])
+AC_MSG_RESULT($HAVE_L2PROJECTIONEPL)
+dnl }}}
+dnl with-L2ProjectionBase{{{
+AC_ARG_WITH([L2ProjectionBase],
+	AS_HELP_STRING([--with-L2ProjectionBase = YES], [compile with L2ProjectionBase capabilities (default is yes)]),
+	[L2PROJECTIONBASE=$withval],[L2PROJECTIONBASE=yes])
+AC_MSG_CHECKING(for L2ProjectionBase capability compilation)
+
+HAVE_L2PROJECTIONBASE=no 
+if test "x$L2PROJECTIONBASE" = "xyes"; then
+	HAVE_L2PROJECTIONBASE=yes
+	AC_DEFINE([_HAVE_L2PROJECTIONBASE_],[1],[with L2ProjectionBasecapability])
+fi
+AM_CONDITIONAL([L2PROJECTIONBASE], [test x$HAVE_L2PROJECTIONBASE = xyes])
+AC_MSG_RESULT($HAVE_L2PROJECTIONBASE)
+dnl }}}
+dnl with-DamageEvolution{{{
+AC_ARG_WITH([DamageEvolution],
+	AS_HELP_STRING([--with-DamageEvolution = YES], [compile with DamageEvolution capabilities (default is yes)]),
+	[DAMAGEEVOLUTION=$withval],[DAMAGEEVOLUTION=yes])
+AC_MSG_CHECKING(for DamageEvolution capability compilation)
+
+HAVE_DAMAGEEVOLUTION=no 
+if test "x$DAMAGEEVOLUTION" = "xyes"; then
+	HAVE_DAMAGEEVOLUTION=yes
+	AC_DEFINE([_HAVE_DAMAGEEVOLUTION_],[1],[with DamageEvolutioncapability])
+fi
+AM_CONDITIONAL([DAMAGEEVOLUTION], [test x$HAVE_DAMAGEEVOLUTION = xyes])
+AC_MSG_RESULT($HAVE_DAMAGEEVOLUTION)
+dnl }}}
+dnl with-Stressbalance{{{
+AC_ARG_WITH([Stressbalance],
+	AS_HELP_STRING([--with-Stressbalance = YES], [compile with Stressbalance capabilities (default is yes)]),
+	[STRESSBALANCE=$withval],[STRESSBALANCE=yes])
+AC_MSG_CHECKING(for Stressbalance capability compilation)
+
+HAVE_STRESSBALANCE=no 
+if test "x$STRESSBALANCE" = "xyes"; then
+	HAVE_STRESSBALANCE=yes
+	AC_DEFINE([_HAVE_STRESSBALANCE_],[1],[with Stressbalancecapability])
+fi
+AM_CONDITIONAL([STRESSBALANCE], [test x$HAVE_STRESSBALANCE = xyes])
+AC_MSG_RESULT($HAVE_STRESSBALANCE)
+dnl }}}
+dnl with-StressbalanceSIA{{{
+AC_ARG_WITH([StressbalanceSIA],
+	AS_HELP_STRING([--with-StressbalanceSIA = YES], [compile with StressbalanceSIA capabilities (default is yes)]),
+	[STRESSBALANCESIA=$withval],[STRESSBALANCESIA=yes])
+AC_MSG_CHECKING(for StressbalanceSIA capability compilation)
+
+HAVE_STRESSBALANCESIA=no 
+if test "x$STRESSBALANCESIA" = "xyes"; then
+	HAVE_STRESSBALANCESIA=yes
+	AC_DEFINE([_HAVE_STRESSBALANCESIA_],[1],[with StressbalanceSIAcapability])
+fi
+AM_CONDITIONAL([STRESSBALANCESIA], [test x$HAVE_STRESSBALANCESIA = xyes])
+AC_MSG_RESULT($HAVE_STRESSBALANCESIA)
+dnl }}}
+dnl with-StressbalanceVertical{{{
+AC_ARG_WITH([StressbalanceVertical],
+	AS_HELP_STRING([--with-StressbalanceVertical = YES], [compile with StressbalanceVertical capabilities (default is yes)]),
+	[STRESSBALANCEVERTICAL=$withval],[STRESSBALANCEVERTICAL=yes])
+AC_MSG_CHECKING(for StressbalanceVertical capability compilation)
+
+HAVE_STRESSBALANCEVERTICAL=no 
+if test "x$STRESSBALANCEVERTICAL" = "xyes"; then
+	HAVE_STRESSBALANCEVERTICAL=yes
+	AC_DEFINE([_HAVE_STRESSBALANCEVERTICAL_],[1],[with StressbalanceVerticalcapability])
+fi
+AM_CONDITIONAL([STRESSBALANCEVERTICAL], [test x$HAVE_STRESSBALANCEVERTICAL = xyes])
+AC_MSG_RESULT($HAVE_STRESSBALANCEVERTICAL)
+dnl }}}
+dnl with-Enthalpy{{{
+AC_ARG_WITH([Enthalpy],
+	AS_HELP_STRING([--with-Enthalpy = YES], [compile with Enthalpy capabilities (default is yes)]),
+	[ENTHALPY=$withval],[ENTHALPY=yes])
+AC_MSG_CHECKING(for Enthalpy capability compilation)
+
+HAVE_ENTHALPY=no 
+if test "x$ENTHALPY" = "xyes"; then
+	HAVE_ENTHALPY=yes
+	AC_DEFINE([_HAVE_ENTHALPY_],[1],[with Enthalpycapability])
+fi
+AM_CONDITIONAL([ENTHALPY], [test x$HAVE_ENTHALPY = xyes])
+AC_MSG_RESULT($HAVE_ENTHALPY)
+dnl }}}
+dnl with-HydrologyShreve{{{
+AC_ARG_WITH([HydrologyShreve],
+	AS_HELP_STRING([--with-HydrologyShreve = YES], [compile with HydrologyShreve capabilities (default is yes)]),
+	[HYDROLOGYSHREVE=$withval],[HYDROLOGYSHREVE=yes])
+AC_MSG_CHECKING(for HydrologyShreve capability compilation)
+
+HAVE_HYDROLOGYSHREVE=no 
+if test "x$HYDROLOGYSHREVE" = "xyes"; then
+	HAVE_HYDROLOGYSHREVE=yes
+	AC_DEFINE([_HAVE_HYDROLOGYSHREVE_],[1],[with HydrologyShrevecapability])
+fi
+AM_CONDITIONAL([HYDROLOGYSHREVE], [test x$HAVE_HYDROLOGYSHREVE = xyes])
+AC_MSG_RESULT($HAVE_HYDROLOGYSHREVE)
+dnl }}}
+dnl with-HydrologyDCInefficient{{{
+AC_ARG_WITH([HydrologyDCInefficient],
+	AS_HELP_STRING([--with-HydrologyDCInefficient = YES], [compile with HydrologyDCInefficient capabilities (default is yes)]),
+	[HYDROLOGYDCINEFFICIENT=$withval],[HYDROLOGYDCINEFFICIENT=yes])
+AC_MSG_CHECKING(for HydrologyDCInefficient capability compilation)
+
+HAVE_HYDROLOGYDCINEFFICIENT=no 
+if test "x$HYDROLOGYDCINEFFICIENT" = "xyes"; then
+	HAVE_HYDROLOGYDCINEFFICIENT=yes
+	AC_DEFINE([_HAVE_HYDROLOGYDCINEFFICIENT_],[1],[with HydrologyDCInefficientcapability])
+fi
+AM_CONDITIONAL([HYDROLOGYDCINEFFICIENT], [test x$HAVE_HYDROLOGYDCINEFFICIENT = xyes])
+AC_MSG_RESULT($HAVE_HYDROLOGYDCINEFFICIENT)
+dnl }}}
+dnl with-HydrologyDCEfficient{{{
+AC_ARG_WITH([HydrologyDCEfficient],
+	AS_HELP_STRING([--with-HydrologyDCEfficient = YES], [compile with HydrologyDCEfficient capabilities (default is yes)]),
+	[HYDROLOGYDCEFFICIENT=$withval],[HYDROLOGYDCEFFICIENT=yes])
+AC_MSG_CHECKING(for HydrologyDCEfficient capability compilation)
+
+HAVE_HYDROLOGYDCEFFICIENT=no 
+if test "x$HYDROLOGYDCEFFICIENT" = "xyes"; then
+	HAVE_HYDROLOGYDCEFFICIENT=yes
+	AC_DEFINE([_HAVE_HYDROLOGYDCEFFICIENT_],[1],[with HydrologyDCEfficientcapability])
+fi
+AM_CONDITIONAL([HYDROLOGYDCEFFICIENT], [test x$HAVE_HYDROLOGYDCEFFICIENT = xyes])
+AC_MSG_RESULT($HAVE_HYDROLOGYDCEFFICIENT)
+dnl }}}
+dnl with-Melting{{{
+AC_ARG_WITH([Melting],
+	AS_HELP_STRING([--with-Melting = YES], [compile with Melting capabilities (default is yes)]),
+	[MELTING=$withval],[MELTING=yes])
+AC_MSG_CHECKING(for Melting capability compilation)
+
+HAVE_MELTING=no 
+if test "x$MELTING" = "xyes"; then
+	HAVE_MELTING=yes
+	AC_DEFINE([_HAVE_MELTING_],[1],[with Meltingcapability])
+fi
+AM_CONDITIONAL([MELTING], [test x$HAVE_MELTING = xyes])
+AC_MSG_RESULT($HAVE_MELTING)
+dnl }}}
+dnl with-Masstransport{{{
+AC_ARG_WITH([Masstransport],
+	AS_HELP_STRING([--with-Masstransport = YES], [compile with Masstransport capabilities (default is yes)]),
+	[MASSTRANSPORT=$withval],[MASSTRANSPORT=yes])
+AC_MSG_CHECKING(for Masstransport capability compilation)
+
+HAVE_MASSTRANSPORT=no 
+if test "x$MASSTRANSPORT" = "xyes"; then
+	HAVE_MASSTRANSPORT=yes
+	AC_DEFINE([_HAVE_MASSTRANSPORT_],[1],[with Masstransportcapability])
+fi
+AM_CONDITIONAL([MASSTRANSPORT], [test x$HAVE_MASSTRANSPORT = xyes])
+AC_MSG_RESULT($HAVE_MASSTRANSPORT)
+dnl }}}
+dnl with-FreeSurfaceBase{{{
+AC_ARG_WITH([FreeSurfaceBase],
+	AS_HELP_STRING([--with-FreeSurfaceBase = YES], [compile with FreeSurfaceBase capabilities (default is yes)]),
+	[FREESURFACEBASE=$withval],[FREESURFACEBASE=yes])
+AC_MSG_CHECKING(for FreeSurfaceBase capability compilation)
+
+HAVE_FREESURFACEBASE=no 
+if test "x$FREESURFACEBASE" = "xyes"; then
+	HAVE_FREESURFACEBASE=yes
+	AC_DEFINE([_HAVE_FREESURFACEBASE_],[1],[with FreeSurfaceBasecapability])
+fi
+AM_CONDITIONAL([FREESURFACEBASE], [test x$HAVE_FREESURFACEBASE = xyes])
+AC_MSG_RESULT($HAVE_FREESURFACEBASE)
+dnl }}}
+dnl with-FreeSurfaceTop{{{
+AC_ARG_WITH([FreeSurfaceTop],
+	AS_HELP_STRING([--with-FreeSurfaceTop = YES], [compile with FreeSurfaceTop capabilities (default is yes)]),
+	[FREESURFACETOP=$withval],[FREESURFACETOP=yes])
+AC_MSG_CHECKING(for FreeSurfaceTop capability compilation)
+
+HAVE_FREESURFACETOP=no 
+if test "x$FREESURFACETOP" = "xyes"; then
+	HAVE_FREESURFACETOP=yes
+	AC_DEFINE([_HAVE_FREESURFACETOP_],[1],[with FreeSurfaceTopcapability])
+fi
+AM_CONDITIONAL([FREESURFACETOP], [test x$HAVE_FREESURFACETOP = xyes])
+AC_MSG_RESULT($HAVE_FREESURFACETOP)
+dnl }}}
+dnl with-ExtrudeFromBase{{{
+AC_ARG_WITH([ExtrudeFromBase],
+	AS_HELP_STRING([--with-ExtrudeFromBase = YES], [compile with ExtrudeFromBase capabilities (default is yes)]),
+	[EXTRUDEFROMBASE=$withval],[EXTRUDEFROMBASE=yes])
+AC_MSG_CHECKING(for ExtrudeFromBase capability compilation)
+
+HAVE_EXTRUDEFROMBASE=no 
+if test "x$EXTRUDEFROMBASE" = "xyes"; then
+	HAVE_EXTRUDEFROMBASE=yes
+	AC_DEFINE([_HAVE_EXTRUDEFROMBASE_],[1],[with ExtrudeFromBasecapability])
+fi
+AM_CONDITIONAL([EXTRUDEFROMBASE], [test x$HAVE_EXTRUDEFROMBASE = xyes])
+AC_MSG_RESULT($HAVE_EXTRUDEFROMBASE)
+dnl }}}
+dnl with-ExtrudeFromTop{{{
+AC_ARG_WITH([ExtrudeFromTop],
+	AS_HELP_STRING([--with-ExtrudeFromTop = YES], [compile with ExtrudeFromTop capabilities (default is yes)]),
+	[EXTRUDEFROMTOP=$withval],[EXTRUDEFROMTOP=yes])
+AC_MSG_CHECKING(for ExtrudeFromTop capability compilation)
+
+HAVE_EXTRUDEFROMTOP=no 
+if test "x$EXTRUDEFROMTOP" = "xyes"; then
+	HAVE_EXTRUDEFROMTOP=yes
+	AC_DEFINE([_HAVE_EXTRUDEFROMTOP_],[1],[with ExtrudeFromTopcapability])
+fi
+AM_CONDITIONAL([EXTRUDEFROMTOP], [test x$HAVE_EXTRUDEFROMTOP = xyes])
+AC_MSG_RESULT($HAVE_EXTRUDEFROMTOP)
+dnl }}}
+dnl with-DepthAverage{{{
+AC_ARG_WITH([DepthAverage],
+	AS_HELP_STRING([--with-DepthAverage = YES], [compile with DepthAverage capabilities (default is yes)]),
+	[DEPTHAVERAGE=$withval],[DEPTHAVERAGE=yes])
+AC_MSG_CHECKING(for DepthAverage capability compilation)
+
+HAVE_DEPTHAVERAGE=no 
+if test "x$DEPTHAVERAGE" = "xyes"; then
+	HAVE_DEPTHAVERAGE=yes
+	AC_DEFINE([_HAVE_DEPTHAVERAGE_],[1],[with DepthAveragecapability])
+fi
+AM_CONDITIONAL([DEPTHAVERAGE], [test x$HAVE_DEPTHAVERAGE = xyes])
+AC_MSG_RESULT($HAVE_DEPTHAVERAGE)
+dnl }}}
+dnl with-SmoothedSurfaceSlopeX{{{
+AC_ARG_WITH([SmoothedSurfaceSlopeX],
+	AS_HELP_STRING([--with-SmoothedSurfaceSlopeX = YES], [compile with SmoothedSurfaceSlopeX capabilities (default is yes)]),
+	[SMOOTHEDSURFACESLOPEX=$withval],[SMOOTHEDSURFACESLOPEX=yes])
+AC_MSG_CHECKING(for SmoothedSurfaceSlopeX capability compilation)
+
+HAVE_SMOOTHEDSURFACESLOPEX=no 
+if test "x$SMOOTHEDSURFACESLOPEX" = "xyes"; then
+	HAVE_SMOOTHEDSURFACESLOPEX=yes
+	AC_DEFINE([_HAVE_SMOOTHEDSURFACESLOPEX_],[1],[with SmoothedSurfaceSlopeXcapability])
+fi
+AM_CONDITIONAL([SMOOTHEDSURFACESLOPEX], [test x$HAVE_SMOOTHEDSURFACESLOPEX = xyes])
+AC_MSG_RESULT($HAVE_SMOOTHEDSURFACESLOPEX)
+dnl }}}
+dnl with-SmoothedSurfaceSlopeY{{{
+AC_ARG_WITH([SmoothedSurfaceSlopeY],
+	AS_HELP_STRING([--with-SmoothedSurfaceSlopeY = YES], [compile with SmoothedSurfaceSlopeY capabilities (default is yes)]),
+	[SMOOTHEDSURFACESLOPEY=$withval],[SMOOTHEDSURFACESLOPEY=yes])
+AC_MSG_CHECKING(for SmoothedSurfaceSlopeY capability compilation)
+
+HAVE_SMOOTHEDSURFACESLOPEY=no 
+if test "x$SMOOTHEDSURFACESLOPEY" = "xyes"; then
+	HAVE_SMOOTHEDSURFACESLOPEY=yes
+	AC_DEFINE([_HAVE_SMOOTHEDSURFACESLOPEY_],[1],[with SmoothedSurfaceSlopeYcapability])
+fi
+AM_CONDITIONAL([SMOOTHEDSURFACESLOPEY], [test x$HAVE_SMOOTHEDSURFACESLOPEY = xyes])
+AC_MSG_RESULT($HAVE_SMOOTHEDSURFACESLOPEY)
+dnl }}}
+dnl with-Thermal{{{
+AC_ARG_WITH([Thermal],
+	AS_HELP_STRING([--with-Thermal = YES], [compile with Thermal capabilities (default is yes)]),
+	[THERMAL=$withval],[THERMAL=yes])
+AC_MSG_CHECKING(for Thermal capability compilation)
+
+HAVE_THERMAL=no 
+if test "x$THERMAL" = "xyes"; then
+	HAVE_THERMAL=yes
+	AC_DEFINE([_HAVE_THERMAL_],[1],[with Thermalcapability])
+fi
+AM_CONDITIONAL([THERMAL], [test x$HAVE_THERMAL = xyes])
+AC_MSG_RESULT($HAVE_THERMAL)
+dnl }}}
+dnl with-Gia{{{
+AC_ARG_WITH([Gia],
+	AS_HELP_STRING([--with-Gia = YES], [compile with Gia capabilities (default is yes)]),
+	[GIA=$withval],[GIA=yes])
+AC_MSG_CHECKING(for Gia capability compilation)
+
+HAVE_GIA=no 
+if test "x$GIA" = "xyes"; then
+	HAVE_GIA=yes
+	AC_DEFINE([_HAVE_GIA_],[1],[with Giacapability])
+fi
+AM_CONDITIONAL([GIA], [test x$HAVE_GIA = xyes])
+AC_MSG_RESULT($HAVE_GIA)
+dnl }}}
+dnl with-Meshdeformation{{{
+AC_ARG_WITH([Meshdeformation],
+	AS_HELP_STRING([--with-Meshdeformation = YES], [compile with Meshdeformation capabilities (default is yes)]),
+	[MESHDEFORMATION=$withval],[MESHDEFORMATION=yes])
+AC_MSG_CHECKING(for Meshdeformation capability compilation)
+
+HAVE_MESHDEFORMATION=no 
+if test "x$MESHDEFORMATION" = "xyes"; then
+	HAVE_MESHDEFORMATION=yes
+	AC_DEFINE([_HAVE_MESHDEFORMATION_],[1],[with Meshdeformationcapability])
+fi
+AM_CONDITIONAL([MESHDEFORMATION], [test x$HAVE_MESHDEFORMATION = xyes])
+AC_MSG_RESULT($HAVE_MESHDEFORMATION)
+dnl }}}
+dnl with-Levelset{{{
+AC_ARG_WITH([Levelset],
+	AS_HELP_STRING([--with-Levelset = YES], [compile with Levelset capabilities (default is yes)]),
+	[LEVELSET=$withval],[LEVELSET=yes])
+AC_MSG_CHECKING(for Levelset capability compilation)
+
+HAVE_LEVELSET=no 
+if test "x$LEVELSET" = "xyes"; then
+	HAVE_LEVELSET=yes
+	AC_DEFINE([_HAVE_LEVELSET_],[1],[with Levelsetcapability])
+fi
+AM_CONDITIONAL([LEVELSET], [test x$HAVE_LEVELSET = xyes])
+AC_MSG_RESULT($HAVE_LEVELSET)
+dnl }}}
+dnl with-Extrapolation{{{
+AC_ARG_WITH([Extrapolation],
+	AS_HELP_STRING([--with-Extrapolation = YES], [compile with Extrapolation capabilities (default is yes)]),
+	[EXTRAPOLATION=$withval],[EXTRAPOLATION=yes])
+AC_MSG_CHECKING(for Extrapolation capability compilation)
+
+HAVE_EXTRAPOLATION=no 
+if test "x$EXTRAPOLATION" = "xyes"; then
+	HAVE_EXTRAPOLATION=yes
+	AC_DEFINE([_HAVE_EXTRAPOLATION_],[1],[with Extrapolationcapability])
+fi
+AM_CONDITIONAL([EXTRAPOLATION], [test x$HAVE_EXTRAPOLATION = xyes])
+AC_MSG_RESULT($HAVE_EXTRAPOLATION)
+dnl }}}
+dnl with-LsfReinitialization{{{
+AC_ARG_WITH([LsfReinitialization],
+	AS_HELP_STRING([--with-LsfReinitialization = YES], [compile with LsfReinitialization capabilities (default is yes)]),
+	[LSFREINITIALIZATION=$withval],[LSFREINITIALIZATION=yes])
+AC_MSG_CHECKING(for LsfReinitialization capability compilation)
+
+HAVE_LSFREINITIALIZATION=no 
+if test "x$LSFREINITIALIZATION" = "xyes"; then
+	HAVE_LSFREINITIALIZATION=yes
+	AC_DEFINE([_HAVE_LSFREINITIALIZATION_],[1],[with LsfReinitializationcapability])
+fi
+AM_CONDITIONAL([LSFREINITIALIZATION], [test x$HAVE_LSFREINITIALIZATION = xyes])
+AC_MSG_RESULT($HAVE_LSFREINITIALIZATION)
+dnl }}}
 
 ])
