Index: /issm/trunk-jpl/src/c/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/CMakeLists.txt	(revision 15441)
+++ /issm/trunk-jpl/src/c/CMakeLists.txt	(revision 15442)
@@ -1,15 +1,234 @@
-# Subdirectories {{{
-add_subdirectory(classes)
-add_subdirectory(Container)
-add_subdirectory(EnumDefinitions)
-add_subdirectory(include)
-add_subdirectory(io)
-add_subdirectory(modules)
-add_subdirectory(shared)
-add_subdirectory(solutions)
-add_subdirectory(solvers)
-add_subdirectory(toolkits)
+# Include Directory {{{
+include_directories(AFTER $ENV{ISSM_DIR}/src/c \
+                          $ENV{ISSM_DIR}/src/c/main \
+                          $ENV{ISSM_DIR}/src/c/datastructure \
+                          $ENV{ISSM_DIR}/src/c/classes \
+                          $ENV{ISSM_DIR}/src/c/classes/Options \
+                          $ENV{ISSM_DIR}/src/c/classes/ElementResults \
+                          $ENV{ISSM_DIR}/src/c/classes/ExternalResults \
+                          $ENV{ISSM_DIR}/src/c/classes/Elements \
+                          $ENV{ISSM_DIR}/src/c/classes/Inputs \
+                          $ENV{ISSM_DIR}/src/c/classes/Materials \
+                          $ENV{ISSM_DIR}/src/c/classes/Constraints \
+                          $ENV{ISSM_DIR}/src/c/classes/Loads \
+                          $ENV{ISSM_DIR}/src/c/classes/matrix \
+                          $ENV{ISSM_DIR}/src/c/classes/Params \
+                          $ENV{ISSM_DIR}/src/c/classes/Params \
+                          $ENV{ISSM_DIR}/src/c/shared \
+                          $ENV{ISSM_DIR}/src/c/shared/MemOps \
+                          $ENV{ISSM_DIR}/src/c/shared/Matrix \
+                          $ENV{ISSM_DIR}/src/c/shared/io \
+                          $ENV{ISSM_DIR}/src/c/shared/io/Disk \
+                          $ENV{ISSM_DIR}/src/c/shared/io/Print \
+                          $ENV{ISSM_DIR}/src/c/shared/io/Comm \
+                          $ENV{ISSM_DIR}/src/c/shared/LatLong \
+                          $ENV{ISSM_DIR}/src/c/shared/Enum \
+                          $ENV{ISSM_DIR}/src/c/shared/Numerics \
+                          $ENV{ISSM_DIR}/src/c/shared/Exceptions \
+                          $ENV{ISSM_DIR}/src/c/shared/Sorting \
+                          $ENV{ISSM_DIR}/src/c/shared/Elements \
+                          $ENV{ISSM_DIR}/src/c/shared/String \
+                          $ENV{ISSM_DIR}/src/c/toolkits \
+                          $ENV{ISSM_DIR}/src/c/toolkits/metis \
+                          $ENV{ISSM_DIR}/src/c/toolkits/issm \
+                          $ENV{ISSM_DIR}/src/c/toolkits/adolc \
+                          $ENV{ISSM_DIR}/src/c/toolkits/triangle \
+                          $ENV{ISSM_DIR}/src/c/toolkits/objects \
+                          $ENV{ISSM_DIR}/src/c/modules \
+                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx \
+                          $ENV{ISSM_DIR}/src/c/modules/ParseToolkitsOptionsx \
+                          $ENV{ISSM_DIR}/src/c/modules/NodesDofx \
+                          $ENV{ISSM_DIR}/src/c/modules/NodalValuex \
+                          $ENV{ISSM_DIR}/src/c/modules/VerticesDofx \
+                          $ENV{ISSM_DIR}/src/c/modules/VertexCoordinatesx \
+                          $ENV{ISSM_DIR}/src/c/modules/OutputResultsx \
+                          $ENV{ISSM_DIR}/src/c/modules/InputDuplicatex \
+                          $ENV{ISSM_DIR}/src/c/modules/InputScalex \
+                          $ENV{ISSM_DIR}/src/c/modules/SurfaceAreax \
+                          $ENV{ISSM_DIR}/src/c/modules/CreateNodalConstraintsx \
+                          $ENV{ISSM_DIR}/src/c/modules/UpdateDynamicConstraintsx \
+                          $ENV{ISSM_DIR}/src/c/modules/IoModelToConstraintsx \
+                          $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromConstantx \
+                          $ENV{ISSM_DIR}/src/c/modules/GetSolutionFromInputsx \
+                          $ENV{ISSM_DIR}/src/c/modules/GetVectorFromInputsx \
+                          $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromVectorx \
+                          $ENV{ISSM_DIR}/src/c/modules/InputArtificialNoisex \
+                          $ENV{ISSM_DIR}/src/c/modules/ConfigureObjectsx \
+                          $ENV{ISSM_DIR}/src/c/modules/ComputeBasalStressx \
+                          $ENV{ISSM_DIR}/src/c/modules/ComputeStrainRatex \
+                          $ENV{ISSM_DIR}/src/c/modules/SpcNodesx \
+                          $ENV{ISSM_DIR}/src/c/modules/PositiveDegreeDayx \
+                          $ENV{ISSM_DIR}/src/c/modules/Delta18oParameterizationx \
+                          $ENV{ISSM_DIR}/src/c/modules/SmbGradientsx \
+                          $ENV{ISSM_DIR}/src/c/modules/MeshPartitionx \
+                          $ENV{ISSM_DIR}/src/c/modules/Reducevectorgtofx \
+                          $ENV{ISSM_DIR}/src/c/modules/Reduceloadx \
+                          $ENV{ISSM_DIR}/src/c/modules/ConstraintsStatex \
+                          $ENV{ISSM_DIR}/src/c/modules/ResetConstraintsx \
+                          $ENV{ISSM_DIR}/src/c/modules/ResetCoordinateSystemx \
+                          $ENV{ISSM_DIR}/src/c/modules/Solverx \
+                          $ENV{ISSM_DIR}/src/c/modules/VecMergex \
+                          $ENV{ISSM_DIR}/src/c/modules/Mergesolutionfromftogx \
+                          $ENV{ISSM_DIR}/src/c/modules/InputToResultx \
+                          $ENV{ISSM_DIR}/src/c/analyses \
+                          $ENV{ISSM_DIR}/src/c/solutionsequences \
+                          $ENV{ISSM_DIR}/src/c/solutionsequences \
 # }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c)
+# Core Sources{{{
+set(core_sources   	./datastructures/DataSet.cpp\
+					./classes/gauss/GaussTria.cpp\
+					./classes/FemModel.cpp\
+					./classes/Loads/Friction.cpp\
+					./classes/Inputs/TransientInput.cpp\
+					./classes/Constraints/SpcTransient.cpp\
+					./classes/IndependentObject.cpp\
+					./classes/DependentObject.cpp\
+					./classes/DofIndexing.cpp\
+					./classes/IoModel.cpp\
+					./classes/Contours.cpp\
+					./classes/Nodes.cpp\
+					./classes/Vertices.cpp\
+					./classes/Node.cpp\
+					./classes/Vertex.cpp\
+					./classes/Hook.cpp\
+					./classes/Patch.cpp\
+					./classes/ElementResults/DoubleElementResult.cpp\
+					./classes/ElementResults/TriaP1ElementResult.cpp\
+					./classes/ElementResults/BoolElementResult.cpp\
+					./classes/ExternalResults/Results.cpp\
+					./classes/Elements/Elements.cpp\
+					./classes/Elements/ElementHook.cpp\
+					./classes/Elements/Tria.cpp\
+					./classes/Elements/TriaRef.cpp\
+					./classes/Inputs/Inputs.cpp\
+					./classes/Inputs/TriaInput.cpp\
+					./classes/Inputs/BoolInput.cpp\
+					./classes/Inputs/IntInput.cpp\
+					./classes/Inputs/DoubleInput.cpp\
+					./classes/Inputs/DatasetInput.cpp\
+					./classes/Materials/Materials.cpp\
+					./classes/Materials/Matice.cpp\
+					./classes/Materials/Matdamageice.cpp\
+					./classes/Materials/Matpar.cpp\
+					./classes/Constraints/Constraints.cpp\
+					./classes/Constraints/SpcStatic.cpp\
+					./classes/Constraints/SpcDynamic.cpp\
+					./classes/Loads/Loads.cpp\
+					./classes/Loads/Penpair.cpp\
+					./classes/Loads/Pengrid.cpp\
+					./classes/Loads/Icefront.cpp\
+					./classes/Loads/Numericalflux.cpp\
+					./classes/matrix/ElementMatrix.cpp\
+					./classes/matrix/ElementVector.cpp\
+					./classes/Params/Parameters.cpp\
+					./classes/Params/BoolParam.cpp\
+					./classes/Params/IntParam.cpp\
+					./classes/Params/IntVecParam.cpp\
+					./classes/Params/IntMatParam.cpp\
+					./classes/Params/DoubleParam.cpp\
+					./classes/Params/FileParam.cpp\
+					./classes/Params/StringArrayParam.cpp\
+					./classes/Params/DoubleMatParam.cpp\
+					./classes/Params/DoubleTransientMatParam.cpp\
+					./classes/Params/DoubleMatArrayParam.cpp\
+					./classes/Params/DoubleVecParam.cpp\
+					./classes/Params/StringParam.cpp\
+					./classes/Params/MatrixParam.cpp\
+					./classes/Params/VectorParam.cpp\
+					./classes/Params/TransientParam.cpp\
+					./classes/Params/DataSetParam.cpp\
+					./classes/Profiler.cpp\
+					./shared/Matrix/MatrixUtils.cpp\
+					./shared/io/Disk/pfopen.cpp\
+					./shared/io/Disk/pfclose.cpp\
+					./shared/io/Disk/WriteLockFile.cpp\
+					./shared/io/Print/PrintfFunction.cpp\
+					./shared/io/Comm/IssmComm.cpp\
+					./shared/LatLong/Ll2xyx.cpp\
+					./shared/LatLong/Xy2llx.cpp\
+					./shared/Enum/EnumToStringx.cpp\
+					./shared/Enum/StringToEnumx.cpp\
+					./shared/Numerics/Verbosity.cpp\
+					./shared/Numerics/GaussPoints.cpp\
+					./shared/Numerics/cross.cpp\
+					./shared/Numerics/isnan.cpp\
+					./shared/Numerics/cubic.cpp\
+					./shared/Numerics/extrema.cpp\
+					./shared/Numerics/XZvectorsToCoordinateSystem.cpp\
+					./shared/Exceptions/Exceptions.cpp\
+					./shared/Exceptions/exprintf.cpp\
+					./shared/Sorting/binary_search.cpp\
+					./shared/Elements/Paterson.cpp\
+					./shared/Elements/Arrhenius.cpp\
+					./shared/Elements/PrintArrays.cpp\
+					./shared/Elements/PddSurfaceMassBalance.cpp\
+					./shared/Elements/ComputeDelta18oTemperaturePrecipitation.cpp\
+					./shared/String/DescriptorIndex.cpp\
+					./toolkits/issm/IssmToolkitUtils.cpp\
+					./toolkits/issm/IssmSolver.cpp\
+					./toolkits/ToolkitOptions.cpp\
+					./modules/ModelProcessorx/ModelProcessorx.cpp\
+					./modules/ModelProcessorx/DistributeNumDofs.cpp\
+					./modules/ModelProcessorx/ElementsAndVerticesPartitioning.cpp\
+					./modules/ModelProcessorx/NodesPartitioning.cpp\
+					./modules/ModelProcessorx/SortDataSets.cpp\
+					./modules/ModelProcessorx/UpdateCounters.cpp\
+					./modules/ModelProcessorx/CreateDataSets.cpp\
+					./modules/ModelProcessorx/CreateParameters.cpp\
+					./modules/ModelProcessorx/Autodiff/CreateParametersAutodiff.cpp\
+					./modules/ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp\
+					./modules/ModelProcessorx/CreateNumberNodeToElementConnectivity.cpp\
+					./modules/ModelProcessorx/CreateElementsVerticesAndMaterials.cpp\
+					./modules/ParseToolkitsOptionsx/ParseToolkitsOptionsx.cpp\
+					./modules/NodesDofx/NodesDofx.cpp\
+					./modules/NodalValuex/NodalValuex.cpp\
+					./modules/VerticesDofx/VerticesDofx.cpp\
+					./modules/VertexCoordinatesx/VertexCoordinatesx.cpp\
+					./modules/OutputResultsx/OutputResultsx.cpp\
+					./modules/InputDuplicatex/InputDuplicatex.cpp\
+					./modules/InputScalex/InputScalex.cpp\
+					./modules/SurfaceAreax/SurfaceAreax.cpp\
+					./modules/CreateNodalConstraintsx/CreateNodalConstraintsx.cpp\
+					./modules/UpdateDynamicConstraintsx/UpdateDynamicConstraintsx.cpp\
+					./modules/IoModelToConstraintsx/IoModelToConstraintsx.cpp\
+					./modules/InputUpdateFromConstantx/InputUpdateFromConstantx.cpp\
+					./modules/InputUpdateFromSolutionx/InputUpdateFromSolutionx.cpp\
+					./modules/GetSolutionFromInputsx/GetSolutionFromInputsx.cpp\
+					./modules/GetVectorFromInputsx/GetVectorFromInputsx.cpp\
+					./modules/InputUpdateFromVectorx/InputUpdateFromVectorx.cpp\
+					./modules/InputArtificialNoisex/InputArtificialNoisex.cpp\
+					./modules/ConfigureObjectsx/ConfigureObjectsx.cpp\
+					./modules/ComputeBasalStressx/ComputeBasalStressx.cpp\
+					./modules/ComputeStrainRatex/ComputeStrainRatex.cpp\
+					./modules/SpcNodesx/SpcNodesx.cpp\
+					./modules/PositiveDegreeDayx/PositiveDegreeDayx.cpp\
+					./modules/Delta18oParameterizationx/Delta18oParameterizationx.cpp\
+					./modules/SmbGradientsx/SmbGradientsx.cpp\
+					./modules/Reducevectorgtofx/Reducevectorgtofx.cpp\
+					./modules/Reduceloadx/Reduceloadx.cpp\
+					./modules/ConstraintsStatex/ConstraintsStatex.cpp\
+					./modules/ResetConstraintsx/ResetConstraintsx.cpp\
+					./modules/ResetCoordinateSystemx/ResetCoordinateSystemx.cpp\
+					./modules/Solverx/Solverx.cpp\
+					./modules/VecMergex/VecMergex.cpp\
+					./modules/Mergesolutionfromftogx/Mergesolutionfromftogx.cpp\
+					./modules/InputToResultx/InputToResultx.cpp\
+					./analyses/ProcessArguments.cpp\
+					./analyses/ResetBoundaryConditions.cpp\
+					./analyses/AnalysisConfiguration.cpp\
+					./analyses/WrapperCorePointerFromSolutionEnum.cpp\
+					./analyses/CorePointerFromSolutionEnum.cpp\
+					./analyses/EnvironmentInit.cpp\
+					./analyses/EnvironmentFinalize.cpp\
+					./analyses/ad_core.cpp\
+					./solutionsequences/solutionsequence_linear.cpp\
+					./solutionsequences/solutionsequence_nonlinear.cpp\
+					./solutionsequences/solutionsequence_newton.cpp\
+					./solutionsequences/convergence.cpp\
+					./classes/Options/Options.cpp\
+					./classes/Options/OptionUtilities.cpp\
+					./classes/RiftStruct.cpp\
 # }}}
+
+add_library(ISSMCore STATIC ${core_sources})
+add_executable(issm ./main/issm.cpp)
Index: sm/trunk-jpl/src/c/analyses/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/analyses/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,60 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/solutions)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/solutions/ad_core.cpp
-   $ENV{ISSM_DIR}/src/c/solutions/AnalysisConfiguration.cpp
-             $ENV{ISSM_DIR}/src/c/solutions/convergence.cpp
-$ENV{ISSM_DIR}/src/c/solutions/CorePointerFromSolutionEnum.cpp
-     $ENV{ISSM_DIR}/src/c/solutions/EnvironmentFinalize.cpp
-         $ENV{ISSM_DIR}/src/c/solutions/EnvironmentInit.cpp
-        $ENV{ISSM_DIR}/src/c/solutions/ProcessArguments.cpp
- $ENV{ISSM_DIR}/src/c/solutions/ResetBoundaryConditions.cpp
-$ENV{ISSM_DIR}/src/c/solutions/WrapperCorePointerFromSolutionEnum.cpp PARENT_SCOPE)
-# }}}
-# DAKOTA_SOURCES {{{
-set(DAKOTA_SOURCES $ENV{ISSM_DIR}/src/c/solutions/dakota_core.cpp
-               $ENV{ISSM_DIR}/src/c/solutions/DakotaSpawnCore.cpp PARENT_SCOPE)
-# }}}
-# TRANSIENT_SOURCES {{{
-set(TRANSIENT_SOURCES $ENV{ISSM_DIR}/src/c/solutions/transient_core.cpp PARENT_SCOPE)
-# }}}
-# STEADYSTATE_SOURCES {{{
-set(STEADYSTATE_SOURCES $ENV{ISSM_DIR}/src/c/solutions/steadystate_core.cpp PARENT_SCOPE)
-# }}}
-# PROGNOSTIC_SOURCES {{{
-set(PROGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/solutions/prognostic_core.cpp PARENT_SCOPE)
-# }}}
-# THERMAL_SOURCES {{{
-set(THERMAL_SOURCES $ENV{ISSM_DIR}/src/c/solutions/enthalpy_core.cpp
-                     $ENV{ISSM_DIR}/src/c/solutions/thermal_core.cpp PARENT_SCOPE)
-# }}}
-# HYDROLOGY_SOURCES {{{
-set(HYDROLOGY_SOURCES $ENV{ISSM_DIR}/src/c/solutions/hydrology_core.cpp
-                 $ENV{ISSM_DIR}/src/c/solutions/hydrology_core_step.cpp PARENT_SCOPE)
-# }}}
-# DIAGNOSTIC_SOURCES {{{
-set(DIAGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/solutions/diagnostic_core.cpp PARENT_SCOPE)
-# }}}
-# BALANCED_SOURCES {{{
-set(BALANCED_SOURCES $ENV{ISSM_DIR}/src/c/solutions/balancethickness_core.cpp
-                                $ENV{ISSM_DIR}/src/c/solutions/dummy_core.cpp PARENT_SCOPE)
-# }}}
-# SLOPE_SOURCES {{{
-set(SLOPE_SOURCES $ENV{ISSM_DIR}/src/c/solutions/bedslope_core.cpp
-              $ENV{ISSM_DIR}/src/c/solutions/surfaceslope_core.cpp PARENT_SCOPE)
-# }}}
-# LIBISSM_LA_SOURCES {{{
-set(LIBISSM_LA_SOURCES $ENV{ISSM_DIR}/src/c/solutions/issm.cpp PARENT_SCOPE)
-# }}}
-# ISSM_SOURCES {{{
-set(ISSM_SOURCES $ENV{ISSM_DIR}/src/c/solutions/issm.cpp PARENT_SCOPE)
-# }}}
-# KRIGING_SOURCES {{{
-set(KRIGING_SOURCES $ENV{ISSM_DIR}/src/c/solutions/kriging.cpp PARENT_SCOPE)
-# }}}
-# ISSMROSE_EXE_SOURCES {{{
-set(ISSMROSE_EXE_SOURCES $ENV{ISSM_DIR}/src/c/main/issm.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/bamg/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/bamg/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,31 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/bamg)
-# }}}
-# BAMG_SOURCES {{{
-set(BAMG_SOURCES $ENV{ISSM_DIR}/src/c/classes/bamg/AdjacentTriangle.cpp
-                         $ENV{ISSM_DIR}/src/c/classes/bamg/BamgGeom.cpp
-                         $ENV{ISSM_DIR}/src/c/classes/bamg/BamgMesh.cpp
-                         $ENV{ISSM_DIR}/src/c/classes/bamg/BamgOpts.cpp
-                     $ENV{ISSM_DIR}/src/c/classes/bamg/BamgQuadtree.cpp
-                       $ENV{ISSM_DIR}/src/c/classes/bamg/BamgVertex.cpp
-                      $ENV{ISSM_DIR}/src/c/classes/bamg/CrackedEdge.cpp
-                            $ENV{ISSM_DIR}/src/c/classes/bamg/Curve.cpp
-                        $ENV{ISSM_DIR}/src/c/classes/bamg/Direction.cpp
-                             $ENV{ISSM_DIR}/src/c/classes/bamg/Edge.cpp
-                      $ENV{ISSM_DIR}/src/c/classes/bamg/EigenMetric.cpp
-                         $ENV{ISSM_DIR}/src/c/classes/bamg/GeomEdge.cpp
-                         $ENV{ISSM_DIR}/src/c/classes/bamg/Geometry.cpp
-                    $ENV{ISSM_DIR}/src/c/classes/bamg/GeomSubDomain.cpp
-                       $ENV{ISSM_DIR}/src/c/classes/bamg/GeomVertex.cpp
-      $ENV{ISSM_DIR}/src/c/classes/bamg/ListofIntersectionTriangles.cpp
-                             $ENV{ISSM_DIR}/src/c/classes/bamg/Mesh.cpp
-                           $ENV{ISSM_DIR}/src/c/classes/bamg/Metric.cpp
-                          $ENV{ISSM_DIR}/src/c/classes/bamg/SetOfE4.cpp
-                        $ENV{ISSM_DIR}/src/c/classes/bamg/SubDomain.cpp
-                         $ENV{ISSM_DIR}/src/c/classes/bamg/Triangle.cpp
-                     $ENV{ISSM_DIR}/src/c/classes/bamg/VertexOnEdge.cpp
-                     $ENV{ISSM_DIR}/src/c/classes/bamg/VertexOnGeom.cpp
-                   $ENV{ISSM_DIR}/src/c/classes/bamg/VertexOnVertex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,20 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(bamg)
-add_subdirectory(dakota)
-add_subdirectory(gauss)
-add_subdirectory(kriging)
-add_subdirectory(matrix)
-add_subdirectory(objects)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/DofIndexing.cpp
-                    $ENV{ISSM_DIR}/src/c/classes/FemModel.cpp
-                        $ENV{ISSM_DIR}/src/c/classes/Hook.cpp
-                     $ENV{ISSM_DIR}/src/c/classes/IoModel.cpp
-                    $ENV{ISSM_DIR}/src/c/classes/IssmComm.cpp
-                       $ENV{ISSM_DIR}/src/c/classes/Patch.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/RiftStruct.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/Constraints/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/Constraints/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,10 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/Constraints)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Constraints/SpcDynamic.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/Constraints/SpcStatic.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Constraints/SpcTransient.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/ElementResults/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/ElementResults/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,13 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/ElementResults)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/ElementResults/BoolElementResult.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/ElementResults/DoubleElementResult.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/ElementResults/TriaP1ElementResult.cpp PARENT_SCOPE)
-# }}}
-# THREED_SOURCES {{{
-set(THREED_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/ElementResults/PentaP1ElementResult.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/Elements/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/Elements/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,15 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/Elements)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Elements/Tria.cpp
-             $ENV{ISSM_DIR}/src/c/classes/objects/Elements/TriaHook.cpp
-              $ENV{ISSM_DIR}/src/c/classes/objects/Elements/TriaRef.cpp PARENT_SCOPE)
-# }}}
-# THREED_SOURCES {{{
-set(THREED_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Elements/Penta.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Elements/PentaHook.cpp
-                $ENV{ISSM_DIR}/src/c/classes/objects/Elements/PentaRef.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/ExternalResults/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/ExternalResults/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/ExternalResults)
-# }}}
Index: sm/trunk-jpl/src/c/classes/Inputs/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/Inputs/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,16 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/Inputs)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Inputs/BoolInput.cpp
-              $ENV{ISSM_DIR}/src/c/classes/objects/Inputs/DatasetInput.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Inputs/DoubleInput.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/Inputs/IntInput.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/Inputs/TransientInput.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Inputs/TriaP1Input.cpp PARENT_SCOPE)
-# }}}
-# THREED_SOURCES {{{
-set(THREED_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Inputs/PentaInput.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/Loads/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/Loads/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,15 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/Loads)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Loads/Friction.cpp
-                 $ENV{ISSM_DIR}/src/c/classes/objects/Loads/Icefront.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/Loads/Numericalflux.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/Loads/Pengrid.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/Loads/Penpair.cpp PARENT_SCOPE)
-# }}}
-# RIFTS_SOURCES {{{
-set(RIFTS_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Loads/Riftfront.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/Materials/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/Materials/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,10 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/Materials)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Materials/Matdamageice.cpp
-                       $ENV{ISSM_DIR}/src/c/classes/objects/Materials/Matice.cpp
-                       $ENV{ISSM_DIR}/src/c/classes/objects/Materials/Matpar.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/Options/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/Options/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/Options)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Options/OptionUtilities.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/Params/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/Params/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,23 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/Params)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/Params/BoolParam.cpp
-              $ENV{ISSM_DIR}/src/c/classes/objects/Params/DataSetParam.cpp
-       $ENV{ISSM_DIR}/src/c/classes/objects/Params/DoubleMatArrayParam.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/Params/DoubleMatParam.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Params/DoubleParam.cpp
-   $ENV{ISSM_DIR}/src/c/classes/objects/Params/DoubleTransientMatParam.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/Params/DoubleVecParam.cpp
-                 $ENV{ISSM_DIR}/src/c/classes/objects/Params/FileParam.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Params/IntMatParam.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/Params/IntParam.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Params/IntVecParam.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Params/MatrixParam.cpp
-          $ENV{ISSM_DIR}/src/c/classes/objects/Params/StringArrayParam.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Params/StringParam.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/Params/TransientParam.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/Params/VectorParam.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/gauss/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/gauss/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,11 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/gauss)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/gauss/GaussTria.cpp PARENT_SCOPE)
-# }}}
-# THREED_SOURCES {{{
-set(THREED_SOURCES $ENV{ISSM_DIR}/src/c/classes/gauss/GaussPenta.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/kriging/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/kriging/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,21 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/kriging)
-# }}}
-# KRIGING_SOURCES {{{
-set(KRIGING_SOURCES $ENV{ISSM_DIR}/src/c/classes/kriging/ExponentialVariogram.cpp
-                       $ENV{ISSM_DIR}/src/c/classes/kriging/GaussianVariogram.cpp
-                             $ENV{ISSM_DIR}/src/c/classes/kriging/Observation.cpp
-                          $ENV{ISSM_DIR}/src/c/classes/kriging/PowerVariogram.cpp
-                                $ENV{ISSM_DIR}/src/c/classes/kriging/Quadtree.cpp
-                      $ENV{ISSM_DIR}/src/c/classes/kriging/SphericalVariogram.cpp PARENT_SCOPE)
-# }}}
-# PKRIGING_SOURCES {{{
-set(PKRIGING_SOURCES $ENV{ISSM_DIR}/src/c/classes/kriging/ExponentialVariogram.cpp
-                        $ENV{ISSM_DIR}/src/c/classes/kriging/GaussianVariogram.cpp
-                              $ENV{ISSM_DIR}/src/c/classes/kriging/Observation.cpp
-                           $ENV{ISSM_DIR}/src/c/classes/kriging/PowerVariogram.cpp
-                                 $ENV{ISSM_DIR}/src/c/classes/kriging/Quadtree.cpp
-                       $ENV{ISSM_DIR}/src/c/classes/kriging/SphericalVariogram.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/classes/matrix/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/classes/matrix/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,9 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/matrix)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/classes/matrix/ElementMatrix.cpp
-                 $ENV{ISSM_DIR}/src/c/classes/matrix/ElementVector.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/kml/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/kml/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,34 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/classes/objects/KML)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Attribute.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_ColorStyle.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Comment.cpp
-                $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Container.cpp
-                 $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Document.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Feature.cpp
-                     $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_File.cpp
-                   $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Folder.cpp
-                 $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Geometry.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_GroundOverlay.cpp
-                     $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Icon.cpp
-                $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_LatLonBox.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_LinearRing.cpp
-               $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_LineString.cpp
-                $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_LineStyle.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_MultiGeometry.cpp
-                   $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Object.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Overlay.cpp
-                $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Placemark.cpp
-                    $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Point.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Polygon.cpp
-                $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_PolyStyle.cpp
-                    $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Style.cpp
-            $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_StyleSelector.cpp
-                 $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_SubStyle.cpp
-                  $ENV{ISSM_DIR}/src/c/classes/objects/KML/KML_Unknown.cpp
-             $ENV{ISSM_DIR}/src/c/classes/objects/KML/KMLFileReadUtils.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/AverageFilterx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/AverageFilterx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/AverageFilterx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/AverageOntoPartitionx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/AverageOntoPartitionx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/AverageOntoPartitionx)
-# }}}
-# DAKOTA_SOURCES {{{
-set(DAKOTA_SOURCES $ENV{ISSM_DIR}/src/c/modules/AverageOntoPartitionx/AverageOntoPartitionx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/BamgConvertMeshx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/BamgConvertMeshx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/BamgConvertMeshx)
-# }}}
-# BAMG_SOURCES {{{
-set(BAMG_SOURCES $ENV{ISSM_DIR}/src/c/modules/BamgConvertMeshx/BamgConvertMeshx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/BamgTriangulatex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/BamgTriangulatex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/BamgTriangulatex)
-# }}}
-# BAMG_SOURCES {{{
-set(BAMG_SOURCES $ENV{ISSM_DIR}/src/c/modules/BamgTriangulatex/BamgTriangulatex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Bamgx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Bamgx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Bamgx)
-# }}}
-# BAMG_SOURCES {{{
-set(BAMG_SOURCES $ENV{ISSM_DIR}/src/c/modules/Bamgx/Bamgx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,99 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(AverageFilterx)
-add_subdirectory(AverageOntoPartitionx)
-add_subdirectory(BamgConvertMeshx)
-add_subdirectory(BamgTriangulatex)
-add_subdirectory(Bamgx)
-add_subdirectory(Chacox)
-add_subdirectory(ComputeBasalStressx)
-add_subdirectory(ComputeStrainRatex)
-add_subdirectory(ConfigureObjectsx)
-add_subdirectory(ConstraintsStatex)
-add_subdirectory(ContourToMeshx)
-add_subdirectory(ContourToNodesx)
-add_subdirectory(ControlInputGetGradientx)
-add_subdirectory(ControlInputScaleGradientx)
-add_subdirectory(ControlInputSetGradientx)
-add_subdirectory(CreateNodalConstraintsx)
-add_subdirectory(Delta18oParameterizationx)
-add_subdirectory(DragCoefficientAbsGradientx)
-add_subdirectory(ElementConnectivityx)
-add_subdirectory(EnumToStringx)
-add_subdirectory(Exp2Kmlx)
-add_subdirectory(GetSolutionFromInputsx)
-add_subdirectory(GetVectorFromControlInputsx)
-add_subdirectory(GetVectorFromInputsx)
-add_subdirectory(Gradjx)
-add_subdirectory(GroundinglineMigrationx)
-add_subdirectory(HoleFillerx)
-add_subdirectory(InputArtificialNoisex)
-add_subdirectory(InputControlUpdatex)
-add_subdirectory(InputDuplicatex)
-add_subdirectory(InputScalex)
-add_subdirectory(InputToResultx)
-add_subdirectory(InputUpdateFromConstantx)
-add_subdirectory(InputUpdateFromDakotax)
-add_subdirectory(InputUpdateFromMatrixDakotax)
-add_subdirectory(InputUpdateFromSolutionx)
-add_subdirectory(InputUpdateFromVectorDakotax)
-add_subdirectory(InputUpdateFromVectorx)
-add_subdirectory(InterpFromGridToMeshx)
-add_subdirectory(InterpFromMesh2dx)
-add_subdirectory(InterpFromMeshToGridx)
-add_subdirectory(InterpFromMeshToMesh2dx)
-add_subdirectory(InterpFromMeshToMesh3dx)
-add_subdirectory(IoModelToConstraintsx)
-add_subdirectory(Kml2Expx)
-add_subdirectory(KMLFileReadx)
-add_subdirectory(KMLMeshWritex)
-add_subdirectory(KMLOverlayx)
-add_subdirectory(Krigingx)
-add_subdirectory(Ll2xyx)
-add_subdirectory(Mergesolutionfromftogx)
-add_subdirectory(MeshPartitionx)
-add_subdirectory(MeshProfileIntersectionx)
-add_subdirectory(ModelProcessorx)
-add_subdirectory(NodalValuex)
-add_subdirectory(NodeConnectivityx)
-add_subdirectory(NodesDofx)
-add_subdirectory(Orthx)
-add_subdirectory(OutputResultsx)
-add_subdirectory(OutputRiftsx)
-add_subdirectory(ParsePetscOptionsx)
-add_subdirectory(PointCloudFindNeighborsx)
-add_subdirectory(PositiveDegreeDayx)
-add_subdirectory(PropagateFlagsFromConnectivityx)
-add_subdirectory(Reduceloadx)
-add_subdirectory(Reducevectorgtofx)
-add_subdirectory(Reducevectorgtosx)
-add_subdirectory(ResetConstraintsx)
-add_subdirectory(ResetCoordinateSystemx)
-add_subdirectory(RheologyBbarAbsGradientx)
-add_subdirectory(Scotchx)
-add_subdirectory(SetControlInputsFromVectorx)
-add_subdirectory(Shp2Expx)
-add_subdirectory(Shp2Kmlx)
-add_subdirectory(SmbGradientsx)
-add_subdirectory(Solverx)
-add_subdirectory(SpcNodesx)
-add_subdirectory(StringToEnumx)
-add_subdirectory(SurfaceAbsVelMisfitx)
-add_subdirectory(SurfaceAreax)
-add_subdirectory(SurfaceAverageVelMisfitx)
-add_subdirectory(SurfaceLogVelMisfitx)
-add_subdirectory(SurfaceLogVxVyMisfitx)
-add_subdirectory(SurfaceRelVelMisfitx)
-add_subdirectory(ThicknessAbsMisfitx)
-add_subdirectory(ThicknessAcrossGradientx)
-add_subdirectory(ThicknessAlongGradientx)
-add_subdirectory(TriaSearchx)
-add_subdirectory(TriMeshProcessRiftsx)
-add_subdirectory(TriMeshx)
-add_subdirectory(UpdateDynamicConstraintsx)
-add_subdirectory(VecMergex)
-add_subdirectory(VerticesDofx)
-add_subdirectory(Xy2llx)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Chacox/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Chacox/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Chacox)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ComputeBasalStressx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ComputeBasalStressx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ComputeBasalStressx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ComputeBasalStressx/ComputeBasalStressx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ComputeStrainRatex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ComputeStrainRatex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ComputeStrainRatex)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ComputeStrainRatex/ComputeStrainRatex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ConfigureObjectsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ConfigureObjectsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ConfigureObjectsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ConfigureObjectsx/ConfigureObjectsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ConstraintsStatex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ConstraintsStatex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,15 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ConstraintsStatex)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ConstraintsStatex/ConstraintsStatex.cpp PARENT_SCOPE)
-# }}}
-# THERMAL_SOURCES {{{
-set(THERMAL_SOURCES $ENV{ISSM_DIR}/src/c/modules/ConstraintsStatex/ThermalConstraintsState.cpp
-                           $ENV{ISSM_DIR}/src/c/modules/ConstraintsStatex/ThermalIsPresent.cpp PARENT_SCOPE)
-# }}}
-# RIFTS_SOURCES {{{
-set(RIFTS_SOURCES $ENV{ISSM_DIR}/src/c/modules/ConstraintsStatex/RiftConstraintsState.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ContourToMeshx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ContourToMeshx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ContourToMeshx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ContourToNodesx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ContourToNodesx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ContourToNodesx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ControlInputGetGradientx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ControlInputGetGradientx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ControlInputGetGradientx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ControlInputScaleGradientx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ControlInputScaleGradientx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ControlInputScaleGradientx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ControlInputSetGradientx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ControlInputSetGradientx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ControlInputSetGradientx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/CreateNodalConstraintsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/CreateNodalConstraintsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/CreateNodalConstraintsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/CreateNodalConstraintsx/CreateNodalConstraintsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Delta18oParameterizationx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Delta18oParameterizationx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Delta18oParameterizationx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/Delta18oParameterizationx/Delta18oParameterizationx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/DragCoefficientAbsGradientx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/DragCoefficientAbsGradientx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/DragCoefficientAbsGradientx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/EdgeDetectionx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/EdgeDetectionx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/EdgeDetectionx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ElementConnectivityx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ElementConnectivityx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ElementConnectivityx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Exp2Kmlx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Exp2Kmlx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Exp2Kmlx)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/modules/Exp2Kmlx/Exp2Kmlx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/GetSolutionFromInputsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/GetSolutionFromInputsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/GetSolutionFromInputsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/GetSolutionFromInputsx/GetSolutionFromInputsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/GetVectorFromControlInputsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/GetVectorFromControlInputsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/GetVectorFromControlInputsx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/GetVectorFromInputsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/GetVectorFromInputsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/GetVectorFromInputsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/GetVectorFromInputsx/GetVectorFromInputsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/GiaDeflectionCorex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/GiaDeflectionCorex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SurfaceAreax)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/GiaDeflectionCorex/GiaDeflectionCorex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Gradjx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Gradjx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Gradjx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/GroundinglineMigrationx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/GroundinglineMigrationx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/GroundinglineMigrationx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/HoleFillerx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/HoleFillerx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/HoleFillerx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputArtificialNoisex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputArtificialNoisex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputArtificialNoisex)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputArtificialNoisex/InputArtificialNoisex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputControlUpdatex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputControlUpdatex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputControlUpdatex)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputDuplicatex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputDuplicatex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputDuplicatex)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputDuplicatex/InputDuplicatex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputScalex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputScalex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputScalex)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputScalex/InputScalex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputToResultx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputToResultx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputToResultx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputToResultx/InputToResultx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputUpdateFromConstantx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputUpdateFromConstantx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromConstantx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromConstantx/InputUpdateFromConstantx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputUpdateFromDakotax/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromDakotax)
-# }}}
-# DAKOTA_SOURCES {{{
-set(DAKOTA_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromDakotax/InputUpdateFromDakotax.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputUpdateFromMatrixDakotax/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputUpdateFromMatrixDakotax/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromMatrixDakotax)
-# }}}
-# DAKOTA_SOURCES {{{
-set(DAKOTA_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromMatrixDakotax/InputUpdateFromMatrixDakotax.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputUpdateFromSolutionx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputUpdateFromSolutionx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromSolutionx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromSolutionx/InputUpdateFromSolutionx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputUpdateFromVectorDakotax/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputUpdateFromVectorDakotax/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromVectorDakotax)
-# }}}
-# DAKOTA_SOURCES {{{
-set(DAKOTA_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromVectorDakotax/InputUpdateFromVectorDakotax.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InputUpdateFromVectorx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InputUpdateFromVectorx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromVectorx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/InputUpdateFromVectorx/InputUpdateFromVectorx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InterpFromGridToMeshx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InterpFromGridToMeshx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InterpFromGridToMeshx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InterpFromMesh2dx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InterpFromMesh2dx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InterpFromMesh2dx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InterpFromMeshToGridx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InterpFromMeshToGridx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InterpFromMeshToGridx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InterpFromMeshToMesh2dx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InterpFromMeshToMesh2dx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InterpFromMeshToMesh2dx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/InterpFromMeshToMesh3dx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/InterpFromMeshToMesh3dx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/InterpFromMeshToMesh3dx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/IoModelToConstraintsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/IoModelToConstraintsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/IoModelToConstraintsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/IoModelToConstraintsx/IoModelToConstraintsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/KMLFileReadx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/KMLFileReadx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/KMLFileReadx)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/modules/KMLFileReadx/KMLFileReadx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/KMLMeshWritex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/KMLMeshWritex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/KMLMeshWritex)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/modules/KMLMeshWritex/KMLMeshWritex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/KMLOverlayx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/KMLOverlayx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/KMLOverlayx)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/modules/KMLOverlayx/KMLOverlayx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Kml2Expx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Kml2Expx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Kml2Expx)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/modules/Kml2Expx/Kml2Expx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Krigingx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Krigingx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,11 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Krigingx)
-# }}}
-# KRIGING_SOURCES {{{
-set(KRIGING_SOURCES $ENV{ISSM_DIR}/src/c/modules/Krigingx/Krigingx.cpp PARENT_SCOPE)
-# }}}
-# PKRIGING_SOURCES {{{
-set(PKRIGING_SOURCES $ENV{ISSM_DIR}/src/c/modules/Krigingx/pKrigingx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Mergesolutionfromftogx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Mergesolutionfromftogx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Mergesolutionfromftogx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/Mergesolutionfromftogx/Mergesolutionfromftogx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/MeshPartitionx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/MeshPartitionx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/MeshPartitionx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/MeshProfileIntersectionx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/MeshProfileIntersectionx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/MeshProfileIntersectionx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Autodiff/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Autodiff/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Autodiff/CreateParametersAutodiff.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Balancethickness/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Balancethickness/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# BALANCED_SOURCES {{{
-set(BALANCED_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Balancethickness/CreateConstraintsBalancethickness.cpp
-                           $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Balancethickness/CreateLoadsBalancethickness.cpp
-                           $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Balancethickness/CreateNodesBalancethickness.cpp
-                        $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Balancethickness/UpdateElementsBalancethickness.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/BedSlope/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/BedSlope/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# SLOPE_SOURCES {{{
-set(SLOPE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/BedSlope/CreateConstraintsBedSlope.cpp
-                        $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/BedSlope/CreateLoadsBedSlope.cpp
-                        $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/BedSlope/CreateNodesBedSlope.cpp
-                     $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/BedSlope/UpdateElementsBedSlope.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,33 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(Autodiff)
-add_subdirectory(Balancethickness)
-add_subdirectory(BedSlope)
-add_subdirectory(Control)
-add_subdirectory(Dakota)
-add_subdirectory(DiagnosticHoriz)
-add_subdirectory(DiagnosticHutter)
-add_subdirectory(DiagnosticVert)
-add_subdirectory(Enthalpy)
-add_subdirectory(Hydrology)
-add_subdirectory(Melting)
-add_subdirectory(Prognostic)
-add_subdirectory(SurfaceSlope)
-add_subdirectory(Thermal)
-add_subdirectory(Transient)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/CreateDataSets.cpp
-$ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/CreateElementsVerticesAndMaterials.cpp
-$ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/CreateNumberNodeToElementConnectivity.cpp
-               $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/CreateParameters.cpp
-$ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/CreateSingleNodeToElementConnectivity.cpp
-              $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DistributeNumDofs.cpp
-$ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/ElementsAndVerticesPartitioning.cpp
-                $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/ModelProcessorx.cpp
-              $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/NodesPartitioning.cpp
-                   $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/SortDataSets.cpp
-                 $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/UpdateCounters.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Control/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Control/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,2 +1,0 @@
-# Subdirectories {{{
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Dakota/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# DAKOTA_SOURCES {{{
-set(DAKOTA_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Dakota/CreateParametersDakota.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/DiagnosticHoriz/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/DiagnosticHoriz/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# DIAGNOSTIC_SOURCES {{{
-set(DIAGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHoriz/CreateConstraintsDiagnosticHoriz.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHoriz/CreateLoadsDiagnosticHoriz.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHoriz/CreateNodesDiagnosticHoriz.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHoriz/UpdateElementsDiagnosticHoriz.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/DiagnosticHutter/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/DiagnosticHutter/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# DIAGNOSTIC_SOURCES {{{
-set(DIAGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHutter/CreateConstraintsDiagnosticHutter.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHutter/CreateLoadsDiagnosticHutter.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHutter/CreateNodesDiagnosticHutter.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticHutter/UpdateElementsDiagnosticHutter.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/DiagnosticVert/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/DiagnosticVert/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# DIAGNOSTIC_SOURCES {{{
-set(DIAGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticVert/CreateConstraintsDiagnosticVert.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticVert/CreateLoadsDiagnosticVert.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticVert/CreateNodesDiagnosticVert.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/DiagnosticVert/UpdateElementsDiagnosticVert.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Enthalpy/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Enthalpy/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# THERMAL_SOURCES {{{
-set(THERMAL_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Enthalpy/CreateConstraintsEnthalpy.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Enthalpy/CreateLoadsEnthalpy.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Enthalpy/CreateNodesEnthalpy.cpp
-                       $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Enthalpy/UpdateElementsEnthalpy.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Gia/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Gia/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# SLOPE_SOURCES {{{
-set(SLOPE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Gia/CreateConstraintsGia.cpp
-                        $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Gia/CreateLoadsGia.cpp
-                        $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Gia/CreateNodesGia.cpp
-                     $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Gia/UpdateElementsGia.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/HydrologyDCEfficient/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/HydrologyDCEfficient/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# HYDROLOGY_SOURCES {{{
-set(HYDROLOGY_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCEfficient/CreateConstraintsHydrologyDCEfficient.cpp
-                         $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCEfficient/CreateLoadsHydrologyDCEfficient.cpp
-                         $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCEfficient/CreateNodesHydrologyDCEfficient.cpp
-                         $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCEfficient/UpdateElementsHydrologyDCEfficient.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/HydrologyDCInefficient/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/HydrologyDCInefficient/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# HYDROLOGY_SOURCES {{{
-set(HYDROLOGY_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCInefficient/CreateConstraintsHydrologyDCInefficient.cpp
-                         $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCInefficient/CreateLoadsHydrologyDCInefficient.cpp
-                         $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCInefficient/CreateNodesHydrologyDCInefficient.cpp
-                         $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyDCInefficient/UpdateElementsHydrologyDCInefficient.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/HydrologyShreve/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/HydrologyShreve/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# HYDROLOGY_SOURCES {{{
-set(HYDROLOGY_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyShreve/CreateConstraintsHydrologyShreve.cpp
-                            $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyShreve/CreateLoadsHydrologyShreve.cpp
-                            $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyShreve/CreateNodesHydrologyShreve.cpp
-                         $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/HydrologyShreve/UpdateElementsHydrologyShreve.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Melting/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Melting/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# THERMAL_SOURCES {{{
-set(THERMAL_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Melting/CreateConstraintsMelting.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Melting/CreateLoadsMelting.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Melting/CreateNodesMelting.cpp
-                       $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Melting/UpdateElementsMelting.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Prognostic/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Prognostic/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# PROGNOSTIC_SOURCES {{{
-set(PROGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Prognostic/CreateConstraintsPrognostic.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Prognostic/CreateLoadsPrognostic.cpp
-                             $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Prognostic/CreateNodesPrognostic.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Prognostic/UpdateElementsPrognostic.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/SurfaceSlope/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/SurfaceSlope/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# SLOPE_SOURCES {{{
-set(SLOPE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/SurfaceSlope/CreateConstraintsSurfaceSlope.cpp
-                        $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/SurfaceSlope/CreateLoadsSurfaceSlope.cpp
-                        $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/SurfaceSlope/CreateNodesSurfaceSlope.cpp
-                     $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/SurfaceSlope/UpdateElementsSurfaceSlope.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Thermal/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Thermal/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# THERMAL_SOURCES {{{
-set(THERMAL_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Thermal/CreateConstraintsThermal.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Thermal/CreateLoadsThermal.cpp
-                          $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Thermal/CreateNodesThermal.cpp
-                       $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Thermal/UpdateElementsThermal.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ModelProcessorx/Transient/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ModelProcessorx/Transient/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# TRANSIENT_SOURCES {{{
-set(TRANSIENT_SOURCES $ENV{ISSM_DIR}/src/c/modules/ModelProcessorx/Transient/UpdateElementsTransient.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/NodalValuex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/NodalValuex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/NodalValuex)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/NodalValuex/NodalValuex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/NodeConnectivityx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/NodeConnectivityx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/NodeConnectivityx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/NodesDofx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/NodesDofx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/NodesDofx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/NodesDofx/NodesDofx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Orthx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Orthx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Orthx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/OutputResultsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/OutputResultsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/OutputResultsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/OutputResultsx/OutputResultsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/OutputRiftsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/OutputRiftsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/OutputRiftsx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ParseToolkitsOptionsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ParseToolkitsOptionsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ParseToolkitsOptionsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ParseToolkitsOptionsx/ParseToolkitsOptionsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/PointCloudFindNeighborsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/PointCloudFindNeighborsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/PointCloudFindNeighborsx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/PositiveDegreeDayx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/PositiveDegreeDayx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/PositiveDegreeDayx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/PositiveDegreeDayx/PositiveDegreeDayx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/PropagateFlagsFromConnectivityx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/PropagateFlagsFromConnectivityx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/PropagateFlagsFromConnectivityx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Reduceloadx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Reduceloadx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Reduceloadx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/Reduceloadx/Reduceloadx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Reducevectorgtofx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Reducevectorgtofx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Reducevectorgtofx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/Reducevectorgtofx/Reducevectorgtofx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Reducevectorgtosx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Reducevectorgtosx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Reducevectorgtosx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ResetConstraintsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ResetConstraintsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,11 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ResetConstraintsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ResetConstraintsx/ResetConstraintsx.cpp PARENT_SCOPE)
-# }}}
-# THERMAL_SOURCES {{{
-set(THERMAL_SOURCES $ENV{ISSM_DIR}/src/c/modules/ResetConstraintsx/ThermalConstraintsReset.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ResetCoordinateSystemx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ResetCoordinateSystemx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ResetCoordinateSystemx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/ResetCoordinateSystemx/ResetCoordinateSystemx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/RheologyBbarAbsGradientx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/RheologyBbarAbsGradientx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/RheologyBbarAbsGradientx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Scotchx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Scotchx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Scotchx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SetControlInputsFromVectorx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SetControlInputsFromVectorx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SetControlInputsFromVectorx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Shp2Expx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Shp2Expx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Shp2Expx)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/modules/Shp2Expx/Shp2Expx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Shp2Kmlx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Shp2Kmlx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Shp2Kmlx)
-# }}}
-# KML_SOURCES {{{
-set(KML_SOURCES $ENV{ISSM_DIR}/src/c/modules/Shp2Kmlx/Shp2Kmlx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SmbGradientsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SmbGradientsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SmbGradientsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/SmbGradientsx/SmbGradientsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/Solverx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/Solverx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/Solverx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/Solverx/Solverx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SpcNodesx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SpcNodesx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SpcNodesx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/SpcNodesx/SpcNodesx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SurfaceAbsVelMisfitx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SurfaceAbsVelMisfitx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SurfaceAbsVelMisfitx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SurfaceAreax/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SurfaceAreax/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SurfaceAreax)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/SurfaceAreax/SurfaceAreax.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SurfaceAverageVelMisfitx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SurfaceAverageVelMisfitx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SurfaceAverageVelMisfitx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SurfaceLogVelMisfitx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SurfaceLogVelMisfitx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SurfaceLogVelMisfitx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SurfaceLogVxVyMisfitx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SurfaceLogVxVyMisfitx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SurfaceLogVxVyMisfitx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/SurfaceRelVelMisfitx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/SurfaceRelVelMisfitx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/SurfaceRelVelMisfitx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ThicknessAbsMisfitx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ThicknessAbsMisfitx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ThicknessAbsMisfitx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ThicknessAcrossGradientx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ThicknessAcrossGradientx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ThicknessAcrossGradientx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/ThicknessAlongGradientx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/ThicknessAlongGradientx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/ThicknessAlongGradientx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/TriMeshProcessRiftsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/TriMeshProcessRiftsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/TriMeshProcessRiftsx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/TriMeshx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/TriMeshx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/TriMeshx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/TriaSearchx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/TriaSearchx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/TriaSearchx)
-# }}}
Index: sm/trunk-jpl/src/c/modules/UpdateDynamicConstraintsx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/UpdateDynamicConstraintsx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/UpdateDynamicConstraintsx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/UpdateDynamicConstraintsx/UpdateDynamicConstraintsx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/VecMergex/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/VecMergex/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/VecMergex)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/VecMergex/VecMergex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/VertexCoordinatesx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/VertexCoordinatesx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/VerticesDofx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/VerticesDofx/VerticesDofx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/modules/VerticesDofx/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/modules/VerticesDofx/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/modules/VerticesDofx)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/modules/VerticesDofx/VerticesDofx.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Bamg/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Bamg/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Bamg)
-# }}}
-# BAMG_SOURCES {{{
-set(BAMG_SOURCES $ENV{ISSM_DIR}/src/c/shared/Bamg/BigPrimeNumber.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,17 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(Alloc)
-add_subdirectory(Bamg)
-add_subdirectory(Elements)
-add_subdirectory(Exceptions)
-add_subdirectory(Exp)
-add_subdirectory(Matrix)
-add_subdirectory(MemOps)
-add_subdirectory(Numerics)
-add_subdirectory(Sorting)
-add_subdirectory(String)
-add_subdirectory(Threads)
-add_subdirectory(TriMesh)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Elements/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Elements/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,23 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Elements)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/shared/Elements/Arrhenius.cpp
-$ENV{ISSM_DIR}/src/c/shared/Elements/ComputeDelta18oTemperaturePrecipitation.cpp
-          $ENV{ISSM_DIR}/src/c/shared/Elements/GetGlobalDofList.cpp
-           $ENV{ISSM_DIR}/src/c/shared/Elements/GetLocalDofList.cpp
-           $ENV{ISSM_DIR}/src/c/shared/Elements/GetNumberOfDofs.cpp
-    $ENV{ISSM_DIR}/src/c/shared/Elements/GetVerticesCoordinates.cpp
-                  $ENV{ISSM_DIR}/src/c/shared/Elements/Paterson.cpp
-     $ENV{ISSM_DIR}/src/c/shared/Elements/PddSurfaceMassBalance.cpp
-               $ENV{ISSM_DIR}/src/c/shared/Elements/PrintArrays.cpp PARENT_SCOPE)
-# }}}
-# DIAGNOSTIC_SOURCES {{{
-set(DIAGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/shared/Elements/CoordinateSystemTransform.cpp
-                $ENV{ISSM_DIR}/src/c/shared/Elements/TransformInvStiffnessMatrixCoord.cpp
-                        $ENV{ISSM_DIR}/src/c/shared/Elements/TransformLoadVectorCoord.cpp
-                          $ENV{ISSM_DIR}/src/c/shared/Elements/TransformSolutionCoord.cpp
-                   $ENV{ISSM_DIR}/src/c/shared/Elements/TransformStiffnessMatrixCoord.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Enum/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Enum/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/EnumDefinitions)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Exceptions/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Exceptions/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,9 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Exceptions)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/shared/Exceptions/Exceptions.cpp
-                   $ENV{ISSM_DIR}/src/c/shared/Exceptions/exprintf.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Exp/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Exp/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Exp)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Matrix/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Matrix/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Matrix)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/shared/Matrix/MatrixUtils.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/MemOps/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/MemOps/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/MemOps)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Numerics/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Numerics/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,15 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Numerics)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/shared/Numerics/cross.cpp
-                 $ENV{ISSM_DIR}/src/c/shared/Numerics/cubic.cpp
-               $ENV{ISSM_DIR}/src/c/shared/Numerics/extrema.cpp
-           $ENV{ISSM_DIR}/src/c/shared/Numerics/GaussPoints.cpp
-                 $ENV{ISSM_DIR}/src/c/shared/Numerics/isnan.cpp
-   $ENV{ISSM_DIR}/src/c/shared/Numerics/OptionsFromAnalysis.cpp
-             $ENV{ISSM_DIR}/src/c/shared/Numerics/Verbosity.cpp
-$ENV{ISSM_DIR}/src/c/shared/Numerics/XZvectorsToCoordinateSystem.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Sorting/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Sorting/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Sorting)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/shared/Sorting/binary_search.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/String/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/String/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,8 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/String)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/shared/String/DescriptorIndex.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/Threads/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/Threads/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/Threads)
-# }}}
Index: sm/trunk-jpl/src/c/shared/TriMesh/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/TriMesh/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/shared/TriMesh)
-# }}}
Index: sm/trunk-jpl/src/c/shared/io/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/io/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,9 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(Disk)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/io)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/io/PrintfFunction.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/shared/io/Disk/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/shared/io/Disk/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,10 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/io/Disk)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/io/Disk/pfclose.cpp
-                  $ENV{ISSM_DIR}/src/c/io/Disk/pfopen.cpp
-           $ENV{ISSM_DIR}/src/c/io/Disk/WriteLockFile.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/solutionsequences/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/solutionsequences/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,16 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/solutionsequences)
-# }}}
-# CORE_SOURCES {{{
-set(CORE_SOURCES $ENV{ISSM_DIR}/src/c/solutionsequences/solutionsequence_linear.cpp
-                 $ENV{ISSM_DIR}/src/c/solutionsequences/solutionsequence_newton.cpp
-              $ENV{ISSM_DIR}/src/c/solutionsequences/solutionsequence_nonlinear.cpp PARENT_SCOPE)
-# }}}
-# THERMAL_SOURCES {{{
-set(THERMAL_SOURCES $ENV{ISSM_DIR}/src/c/solutionsequences/solutionsequence_thermal_nonlinear.cpp PARENT_SCOPE)
-# }}}
-# DIAGNOSTIC_SOURCES {{{
-set(DIAGNOSTIC_SOURCES $ENV{ISSM_DIR}/src/c/solutionsequences/solutionsequence_stokescoupling_nonlinear.cpp PARENT_SCOPE)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,12 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(issm)
-add_subdirectory(metis)
-add_subdirectory(mpi)
-add_subdirectory(petsc)
-add_subdirectory(plapack)
-add_subdirectory(scalapack)
-add_subdirectory(triangle)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/issm/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/issm/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/issm)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/metis/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/metis/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,6 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(patches)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/metis)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/metis/patches/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/metis/patches/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/metis/patches)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/mpi/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/mpi/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,6 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(patches)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/mpi)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/mpi/patches/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/mpi/patches/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/mpi/patches)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/petsc/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/petsc/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,7 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(objects)
-add_subdirectory(patches)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/petsc)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/petsc/objects/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/petsc/objects/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/petsc/objects)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/petsc/patches/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/petsc/patches/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/petsc/patches)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/plapack/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/plapack/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,6 +1,0 @@
-# Subdirectories {{{
-add_subdirectory(patches)
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/plapack)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/plapack/patches/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/plapack/patches/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/plapack/patches)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/scalapack/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/scalapack/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/scalapack)
-# }}}
Index: sm/trunk-jpl/src/c/toolkits/triangle/CMakeLists.txt
===================================================================
--- /issm/trunk-jpl/src/c/toolkits/triangle/CMakeLists.txt	(revision 15441)
+++ 	(revision )
@@ -1,5 +1,0 @@
-# Subdirectories {{{
-# }}}
-# Include Directory {{{
-include_directories(AFTER $ENV{ISSM_DIR}/src/c/toolkits/triangle)
-# }}}
