Changeset 13796

Timestamp:

10/22/12 14:29:33 (12 years ago)

Author:

Mathieu Morlighem

Message:

CHG: no need to have 2 steps anymore

File:

• issm/trunk-jpl/externalpackages/petsc/install-3.3-pleiades.sh (modified) (2 diffs)

issm/trunk-jpl/externalpackages/petsc/install-3.3-pleiades.sh

@@ -1 +1 @@
 #!/bin/bash
-#Step 0: download
-#Step 1: install and write script
-STEP=1
 
-if [ $STEP -eq 0 ]; then
-        
-        #Some cleanup
-        rm -rf install petsc-3.3-p2 src
-        mkdir install src
+#Some cleanup
+rm -rf install petsc-3.3-p2 src
+mkdir install src
 
-        #Download from ISSM server
-        $ISSM_DIR/scripts/DownloadExternalPackage.py 'http://issm.jpl.nasa.gov/files/externalpackages/petsc-lite-3.3-p2.tar.gz' 'petsc-3.3-p2.tar.gz'
+#Download from ISSM server
+$ISSM_DIR/scripts/DownloadExternalPackage.py 'http://issm.jpl.nasa.gov/files/externalpackages/petsc-lite-3.3-p2.tar.gz' 'petsc-3.3-p2.tar.gz'
 
-        #Untar and move petsc to install directory
-        tar -zxvf  petsc-3.3-p2.tar.gz
-        mv petsc-3.3-p2/* src/
-        rm -rf petsc-3.3-p2
-fi
+#Untar and move petsc to install directory
+tar -zxvf  petsc-3.3-p2.tar.gz
+mv petsc-3.3-p2/* src/
+rm -rf petsc-3.3-p2
 
-if [ $STEP -eq 1 ]; then
+#configure
+cd src
+./config/configure.py \
+ --prefix="$ISSM_DIR/externalpackages/petsc/install" \
+ --with-batch=1  \
+ --PETSC_ARCH="$ISSM_ARCH" \
+ --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
+ --with-debugging=0 \
+ --with-shared-libraries=1 \
+ --with-blas-lapack-dir=/nasa/intel/mkl/10.0.011/ \
+ --known-mpi-shared-libraries=1 \
+ --with-mpi=1 \
+ --download-mumps=yes \
+ --download-blacs=yes  \
+ --download-blas=yes \
+ --download-f-blas-lapack=yes \
+ --download-parmetis=yes \
+ --download-metis=yes \
+ --download-trilinos=yes \
+ --download-euclid=yes \
+ --download-spai=yes \
+ --download-superlu=yes \
+ --download-hypre=yes \
+ --download-prometheus=yes \
+ --with-cxx=/nasa/sgi/mpt/2.06a67/bin/mpicxx \
+ --with-fc=/nasa/sgi/mpt/2.06a67/bin/mpif90 \
+ --COPTFLAGS="-lmpi -O3" \
+ --FOPTFLAGS="-lmpi -O3" \
+ --CXXOPTFLAGS="-lmpi -O3" 
 
-        mkdir install
-
-        #configure
-        cd src
-        ./config/configure.py \
-                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
-                --with-batch=1  \
-                --PETSC_ARCH="$ISSM_ARCH" \
-                --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
-                --with-debugging=0 \
-                --with-shared-libraries=1 \
-                --with-blas-lapack-dir=/nasa/intel/mkl/10.0.011/ \
-                --known-mpi-shared-libraries=1 \
-                --with-mpi=1 \
-                --download-mumps=yes \
-                --download-blacs=yes  \
-                --download-blas=yes \
-                --download-f-blas-lapack=yes \
-                --download-parmetis=yes \
-                --download-metis=yes \
-                --download-trilinos=yes \
-                --download-euclid=yes \
-                --download-spai=yes \
-                --download-superlu=yes \
-                --download-hypre=yes \
-                --download-prometheus=yes \
-                --with-cxx=/nasa/sgi/mpt/2.06a67/bin/mpicxx \
-                --with-fc=/nasa/sgi/mpt/2.06a67/bin/mpif90 \
-                --COPTFLAGS="-lmpi -O3" \
-                --FOPTFLAGS="-lmpi -O3" \
-                --CXXOPTFLAGS="-lmpi -O3" 
-                cat > script.queue << EOF
+#prepare script to reconfigure petsc
+cat > script.queue << EOF
 #PBS -S /bin/bash
 #PBS -l select=1:ncpus=1:model=wes 
@@ -66 +58 @@
 mpiexec -np 1 ./conftest-linux-gnu-ia64-intel.py
 EOF
-        echo "== Now: cd src/ "
-        echo "== qsub -q devel script.queue "
-        echo "== Then run reconfigure script generated by PETSc and follow instructions"
-fi
+
+#print instructions
+echo "== Now: cd src/ "
+echo "== qsub -q devel script.queue "
+echo "== Then run reconfigure script generated by PETSc and follow instructions"