Index: /issm/trunk-jpl/externalpackages/petsc/install-dev-pleiades.sh
===================================================================
--- /issm/trunk-jpl/externalpackages/petsc/install-dev-pleiades.sh	(revision 12567)
+++ /issm/trunk-jpl/externalpackages/petsc/install-dev-pleiades.sh	(revision 12567)
@@ -0,0 +1,118 @@
+#!/bin/bash
+#Step 0: download
+#Step 1: unzip and install
+#Step 2: After Plapack implodes
+STEP=0
+
+if [ $STEP -eq 0 ]; then
+	# Adapted from petsc 3.2. 
+	# Used Mercurial to get code
+	rm -rf src
+	hg clone http://petsc.cs.iit.edu/petsc/petsc-dev src
+	cd src
+	hg clone http://petsc.cs.iit.edu/petsc/BuildSystem config/BuildSystem
+fi
+
+# To update (via Mercurial):
+#      cd petsc-dev
+#      hg pull -u
+#      cd config/BuildSystem
+#      hg pull -u
+
+
+# configure script
+# Note: using metis from externalpackages did not work...
+# for now downloading new metis
+#   -then rename metis in externalpackages to metis2
+if [ $STEP -eq 1 ]; then
+	#Some cleanup
+	rm -rf install petsc-3.2-p3 src
+	mkdir install src
+
+	#Download from ISSM server
+	$ISSM_DIR/scripts/DownloadExternalPackage.py 'http://issm.jpl.nasa.gov/files/externalpackages/petsc-3.2-p3.tar.gz' 'petsc-3.2-p3.tar.gz'
+
+	#Untar and move petsc to install directory
+	tar -zxvf  petsc-3.2-p3.tar.gz
+	mv petsc-3.2-p3/* src/
+	rm -rf petsc-3.2-p3
+
+	#configure
+	cd src
+	./config/configure.py \
+		--prefix="$ISSM_DIR/externalpackages/petsc/install" \
+		--with-batch=1  \
+		--PETSC_ARCH="$ISSM_ARCH" \
+		--PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
+		--with-debugging=0 \
+		--with-shared-libraries=0 \
+		--with-blas-lapack-dir=/nasa/intel/mkl/10.0.011/ \
+		--known-mpi-shared-libraries=1 \
+		--with-mpi-lib=/nasa/sgi/mpt/1.25/lib/libmpi.so \
+		--with-mpi-include=/nasa/sgi/mpt/1.25/include  \
+		--download-mumps=yes \
+		--download-plapack=yes \
+		--download-scalapack=yes \
+		--download-blacs=yes  \
+		--download-blas=yes \
+		--download-f-blas-lapack=yes \
+		--download-parmetis=yes \
+		--download-metis=yes \
+		--download-spai=yes \
+		--FFLAGS=-I/usr/include \
+		--with-cc=icc \
+		--with-fc=ifort \
+		--COPTFLAGS=" -O3 -xS" \
+		--FOPTFLAGS=" -O3 -xS" \
+		--CXXOPTFLAGS=" -O3 -xS" \
+		--with-pic=1
+	echo "== Fix Plapack compilation manually (http://issm.jpl.nasa.gov/documentation/faq/petsc32/) =="
+	echo "== Then run STEP=2 =="
+fi
+if [ $STEP -eq 2 ]; then
+	cd src
+	./config/configure.py \
+	 --prefix="$ISSM_DIR/externalpackages/petsc/install" \
+	 --with-batch=1  \
+	 --PETSC_ARCH="$ISSM_ARCH" \
+	 --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
+	 --with-debugging=0 \
+	 --with-shared-libraries=0 \
+	 --with-blas-lapack-dir=/nasa/intel/mkl/10.0.011/ \
+	 --with-mpi-lib=/nasa/sgi/mpt/1.25/lib/libmpi.so \
+	 --with-mpi-include=/nasa/sgi/mpt/1.25/include  \
+	 --known-mpi-shared-libraries=1 \
+	 --download-mumps=yes \
+	 --download-scalapack=yes \
+	 --download-blacs=yes  \
+	 --download-blas=yes \
+	 --download-f-blas-lapack=yes \
+	 --download-parmetis=yes \
+	 --download-metis=yes \
+	 --download-spai=yes \
+	 --with-plapack-dir=$ISSM_DIR/externalpackages/petsc/src/$ISSM_ARCH \
+	 --download-parmetis=yes \
+	 --FFLAGS=-I/usr/include \
+	 --with-cc=icc \
+	 --with-fc=ifort \
+	 --COPTFLAGS=" -O3 -xS" \
+	 --FOPTFLAGS=" -O3 -xS" \
+	 --CXXOPTFLAGS=" -O3 -xS" \
+	 --with-pic=1
+	 cat > src/script.queue << EOF
+#PBS -S /bin/bash
+#PBS -q debug 
+#PBS -l select=1:ncpus=1:model=har 
+#PBS -l walltime=200 
+#PBS -W group_list=s1010 
+#PBS -m e 
+. /usr/share/modules/init/bash 
+module load comp-intel/11.1.046 
+module load mpi/mpt.1.25 
+module load math/intel_mkl_64_10.0.011 
+export PATH="$PATH:." 
+export MPI_GROUP_MAX=64 
+mpiexec -np 1 ./conftest-linux-gnu-ia64-intel.py
+EOF
+	echo "== Follow PETSc's instructions"
+fi