Changeset 12161
- Timestamp:
- 05/01/12 07:54:24 (13 years ago)
- Location:
- issm/trunk-jpl/etc
- Files:
-
- 4 edited
Legend:
- Unmodified
- Added
- Removed
-
issm/trunk-jpl/etc/environment.csh
r12055 r12161 1 #ISSM_ TIER and ISSM_ARCH should have been defined already in your shell settings file (.bashrc, .cshrc, etc ...)2 source $ISSM_ TIER/etc/environment_variables.csh1 #ISSM_DIR and ISSM_ARCH should have been defined already in your shell settings file (.bashrc, .cshrc, etc ...) 2 source $ISSM_DIR/etc/environment_variables.csh 3 3 4 4 #Do we have any command line arguments? (such as MATLAB_DIR=otherdirthandefault), source them before exporting the variables … … 10 10 11 11 #CRON utilities 12 setenv PATH {$PATH}:{$ISSM_ TIER}/cron12 setenv PATH {$PATH}:{$ISSM_DIR}/cron 13 13 14 14 #SCRIPTS utilities 15 setenv PATH {$PATH}:{$ISSM_ TIER}/scripts15 setenv PATH {$PATH}:{$ISSM_DIR}/scripts 16 16 17 17 #MATLAB -
issm/trunk-jpl/etc/environment.sh
r12097 r12161 1 #ISSM_ TIER and ISSM_ARCH should have been defined already in your shell settings file (.bashrc, .cshrc, etc ...)1 #ISSM_DIR and ISSM_ARCH should have been defined already in your shell settings file (.bashrc, .cshrc, etc ...) 2 2 3 3 #Windows compilers: 4 4 if [[ "$ISSM_ARCH" == "cygwin-intel" ]]; then 5 source $ISSM_ TIER/externalpackages/windows/windows_environment.sh5 source $ISSM_DIR/externalpackages/windows/windows_environment.sh 6 6 fi 7 7 8 source $ISSM_ TIER/etc/environment_variables.sh8 source $ISSM_DIR/etc/environment_variables.sh 9 9 10 10 #Do we have any command line arguments? (such as MATLAB_DIR=otherdirthandefault), source them after exporting the variables … … 16 16 17 17 #CRON utilities 18 PATH="$PATH:$ISSM_ TIER/cron"18 PATH="$PATH:$ISSM_DIR/cron" 19 19 20 20 #scripts 21 PATH="$PATH:$ISSM_ TIER/scripts"21 PATH="$PATH:$ISSM_DIR/scripts" 22 22 23 23 ##MATLAB … … 137 137 #export INTEL_DIR 138 138 #PATH="$PATH:$INTEL_DIR" 139 #source $ISSM_ TIER/externalpackages/intel/intel.sh139 #source $ISSM_DIR/externalpackages/intel/intel.sh 140 140 141 141 #SDK … … 259 259 #PYTHON 260 260 export PATH="$PYTHON_DIR/bin:$PATH" 261 export PYTHONPATH="$PYTHONPATH:$ISSM_ TIER/src/modules/python"262 export LD_LIBRARY_PATH=$ISSM_ TIER/src/modules/python:$LD_LIBRARY_PATH261 export PYTHONPATH="$PYTHONPATH:$ISSM_DIR/src/modules/python" 262 export LD_LIBRARY_PATH=$ISSM_DIR/src/modules/python:$LD_LIBRARY_PATH 263 263 264 264 #MODELE -
issm/trunk-jpl/etc/environment_variables.csh
r10874 r12161 1 1 # 2 2 # 3 #This routine can only be run if the ISSM_ TIER variable has been correctly set!3 #This routine can only be run if the ISSM_DIR variable has been correctly set! 4 4 # 5 5 # 6 6 7 7 #MATLAB 8 set MATLAB_DIR={$ISSM_ TIER}/externalpackages/matlab/install8 set MATLAB_DIR={$ISSM_DIR}/externalpackages/matlab/install 9 9 10 10 #MPI 11 set MPI_DIR={$ISSM_ TIER}/externalpackages/mpich2/install11 set MPI_DIR={$ISSM_DIR}/externalpackages/mpich2/install 12 12 13 13 #PETSC 14 set PETSC_DIR={$ISSM_ TIER}/externalpackages/petsc/install14 set PETSC_DIR={$ISSM_DIR}/externalpackages/petsc/install 15 15 16 16 #SLEPC 17 set SLEPC_DIR={$ISSM_ TIER}/externalpackages/slepc/install17 set SLEPC_DIR={$ISSM_DIR}/externalpackages/slepc/install 18 18 19 19 #Dakota 20 set DAKOTA_DIR={$ISSM_ TIER}/externalpackages/dakota/install20 set DAKOTA_DIR={$ISSM_DIR}/externalpackages/dakota/install 21 21 22 22 #Qhull 23 set QHULL_DIR={$ISSM_ TIER}/externalpackages/qhull/install23 set QHULL_DIR={$ISSM_DIR}/externalpackages/qhull/install 24 24 25 25 #Doxygen 26 set DOXYGEN_DIR={$ISSM_ TIER}/externalpackages/doxygen/install26 set DOXYGEN_DIR={$ISSM_DIR}/externalpackages/doxygen/install 27 27 28 28 #MTOC 29 set MTOC_DIR={$ISSM_ TIER}/externalpackages/mtoc/install29 set MTOC_DIR={$ISSM_DIR}/externalpackages/mtoc/install 30 30 31 31 #Triangle 32 set TRIANGLE_DIR={$ISSM_ TIER}/externalpackages/triangle/install32 set TRIANGLE_DIR={$ISSM_DIR}/externalpackages/triangle/install 33 33 34 34 #METIS 35 set METIS_DIR={$ISSM_ TIER}/externalpackages/metis/install35 set METIS_DIR={$ISSM_DIR}/externalpackages/metis/install 36 36 37 37 #BLAS 38 set BLAS_DIR={$ISSM_ TIER}/externalpackages/petsc/install/externalexternalpackages/fblaslapack38 set BLAS_DIR={$ISSM_DIR}/externalpackages/petsc/install/externalexternalpackages/fblaslapack 39 39 40 40 #LAPACK 41 set LAPACK_DIR={$ISSM_ TIER}/externalpackages/petsc/install/externalexternalpackages/fblaslapack/$ISSM_ARCH41 set LAPACK_DIR={$ISSM_DIR}/externalpackages/petsc/install/externalexternalpackages/fblaslapack/$ISSM_ARCH 42 42 43 43 #SCALAPACK 44 set SCALAPACK_DIR={$ISSM_ TIER}/externalpackages/petsc/install/externalexternalpackages/SCALAPACK/$ISSM_ARCH44 set SCALAPACK_DIR={$ISSM_DIR}/externalpackages/petsc/install/externalexternalpackages/SCALAPACK/$ISSM_ARCH 45 45 46 46 #PLAPACK 47 set PLAPACK_DIR={$ISSM_ TIER}/externalpackages/petsc/install/externalexternalpackages/PLAPACKR3247 set PLAPACK_DIR={$ISSM_DIR}/externalpackages/petsc/install/externalexternalpackages/PLAPACKR32 48 48 49 49 #BLACS 50 set BLACS_DIR={$ISSM_ TIER}/externalpackages/petsc/install/externalexternalpackages/blacs-dev/$ISSM_ARCH50 set BLACS_DIR={$ISSM_DIR}/externalpackages/petsc/install/externalexternalpackages/blacs-dev/$ISSM_ARCH 51 51 52 52 #sowing 53 set SOWING_DIR={$ISSM_ TIER}/externalpackages/sowing/install53 set SOWING_DIR={$ISSM_DIR}/externalpackages/sowing/install 54 54 55 55 #YAMS 56 set YAMS_DIR={$ISSM_ TIER}/externalpackages/yams/install56 set YAMS_DIR={$ISSM_DIR}/externalpackages/yams/install 57 57 58 58 #TEX2IM 59 set TEX2IM_DIR={$ISSM_ TIER}/externalpackages/tex2im/install59 set TEX2IM_DIR={$ISSM_DIR}/externalpackages/tex2im/install 60 60 61 61 #Chaco 62 set CHACO_DIR={$ISSM_ TIER}/externalpackages/chaco/install62 set CHACO_DIR={$ISSM_DIR}/externalpackages/chaco/install 63 63 64 64 #MeshPart 65 set MESHPART_DIR={$ISSM_ TIER}/externalpackages/meshpart/install65 set MESHPART_DIR={$ISSM_DIR}/externalpackages/meshpart/install 66 66 67 67 #SCOTCH 68 set SCOTCH_DIR={$ISSM_ TIER}/externalpackages/scotch/install68 set SCOTCH_DIR={$ISSM_DIR}/externalpackages/scotch/install 69 69 70 70 #Development packages 71 71 #automake 72 set AUTOMAKE_DIR={$ISSM_ TIER}/externalpackages/automake/install72 set AUTOMAKE_DIR={$ISSM_DIR}/externalpackages/automake/install 73 73 74 74 #autoconf 75 set AUTOCONF_DIR={$ISSM_ TIER}/externalpackages/autoconf/install75 set AUTOCONF_DIR={$ISSM_DIR}/externalpackages/autoconf/install 76 76 77 77 #borland … … 79 79 80 80 #ssh 81 set SSH_DIR={$ISSM_ TIER}/externalpackages/ssh81 set SSH_DIR={$ISSM_DIR}/externalpackages/ssh 82 82 83 83 #valgrind 84 set VALGRIND_DIR={$ISSM_ TIER}/externalpackages/valgrind/install/bin84 set VALGRIND_DIR={$ISSM_DIR}/externalpackages/valgrind/install/bin -
issm/trunk-jpl/etc/environment_variables.sh
r12097 r12161 1 1 # 2 2 # 3 #This routine can only be run if the ISSM_ TIER variable has been correctly set!3 #This routine can only be run if the ISSM_DIR variable has been correctly set! 4 4 # 5 5 # 6 6 7 7 #MATLAB 8 MATLAB_DIR="$ISSM_ TIER/externalpackages/matlab/install"8 MATLAB_DIR="$ISSM_DIR/externalpackages/matlab/install" 9 9 10 10 #MPI 11 MPI_DIR="$ISSM_ TIER/externalpackages/mpich2/install"11 MPI_DIR="$ISSM_DIR/externalpackages/mpich2/install" 12 12 13 13 #PETSC 14 PETSC_DIR="$ISSM_ TIER/externalpackages/petsc/install"14 PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" 15 15 16 16 #SLEPC 17 SLEPC_DIR="$ISSM_ TIER/externalpackages/slepc/install"17 SLEPC_DIR="$ISSM_DIR/externalpackages/slepc/install" 18 18 19 19 #Dakota 20 DAKOTA_DIR="$ISSM_ TIER/externalpackages/dakota/install"20 DAKOTA_DIR="$ISSM_DIR/externalpackages/dakota/install" 21 21 22 22 #Qhull 23 QHULL_DIR="$ISSM_ TIER/externalpackages/qhull/install"23 QHULL_DIR="$ISSM_DIR/externalpackages/qhull/install" 24 24 25 25 #Doxygen 26 DOXYGEN_DIR="$ISSM_ TIER/externalpackages/doxygen/install"26 DOXYGEN_DIR="$ISSM_DIR/externalpackages/doxygen/install" 27 27 28 28 #MTOC 29 MTOC_DIR="$ISSM_ TIER/externalpackages/mtoc/install"29 MTOC_DIR="$ISSM_DIR/externalpackages/mtoc/install" 30 30 31 31 #Triangle 32 TRIANGLE_DIR="$ISSM_ TIER/externalpackages/triangle/install"32 TRIANGLE_DIR="$ISSM_DIR/externalpackages/triangle/install" 33 33 34 34 #METIS 35 METIS_DIR="$ISSM_ TIER/externalpackages/metis/install"35 METIS_DIR="$ISSM_DIR/externalpackages/metis/install" 36 36 37 37 #BLAS 38 BLAS_DIR="$ISSM_ TIER/externalpackages/petsc/install/externalpackages/fblaslapack"38 BLAS_DIR="$ISSM_DIR/externalpackages/petsc/install/externalpackages/fblaslapack" 39 39 40 40 #LAPACK 41 LAPACK_DIR="$ISSM_ TIER/externalpackages/petsc/install/externalpackages/fblaslapack/$ISSM_ARCH"41 LAPACK_DIR="$ISSM_DIR/externalpackages/petsc/install/externalpackages/fblaslapack/$ISSM_ARCH" 42 42 43 43 #SCALAPACK 44 SCALAPACK_DIR="$ISSM_ TIER/externalpackages/petsc/install/externalpackages/SCALAPACK/$ISSM_ARCH"44 SCALAPACK_DIR="$ISSM_DIR/externalpackages/petsc/install/externalpackages/SCALAPACK/$ISSM_ARCH" 45 45 46 46 #PLAPACK 47 PLAPACK_DIR="$ISSM_ TIER/externalpackages/petsc/install/externalpackages/PLAPACKR32"47 PLAPACK_DIR="$ISSM_DIR/externalpackages/petsc/install/externalpackages/PLAPACKR32" 48 48 49 49 #BLACS 50 BLACS_DIR="$ISSM_ TIER/externalpackages/petsc/install/externalpackages/blacs-dev/$ISSM_ARCH"50 BLACS_DIR="$ISSM_DIR/externalpackages/petsc/install/externalpackages/blacs-dev/$ISSM_ARCH" 51 51 52 52 #sowing 53 SOWING_DIR="$ISSM_ TIER/externalpackages/sowing/install"53 SOWING_DIR="$ISSM_DIR/externalpackages/sowing/install" 54 54 55 55 #BLACS 56 BLACS_DIR="$ISSM_ TIER/externalpackages/petsc/install/externalpackages/blacs-dev/$ISSM_ARCH"56 BLACS_DIR="$ISSM_DIR/externalpackages/petsc/install/externalpackages/blacs-dev/$ISSM_ARCH" 57 57 58 58 #YAMS 59 YAMS_DIR="$ISSM_ TIER/externalpackages/yams/install"59 YAMS_DIR="$ISSM_DIR/externalpackages/yams/install" 60 60 61 61 #BAMG 62 BAMG_DIR="$ISSM_ TIER/externalpackages/bamg/install"62 BAMG_DIR="$ISSM_DIR/externalpackages/bamg/install" 63 63 64 64 #Chaco 65 CHACO_DIR="$ISSM_ TIER/externalpackages/chaco/install"65 CHACO_DIR="$ISSM_DIR/externalpackages/chaco/install" 66 66 67 67 #MeshPart 68 MESHPART_DIR="$ISSM_ TIER/externalpackages/meshpart/install"68 MESHPART_DIR="$ISSM_DIR/externalpackages/meshpart/install" 69 69 70 70 #SCOTCH 71 SCOTCH_DIR="$ISSM_ TIER/externalpackages/scotch/install"71 SCOTCH_DIR="$ISSM_DIR/externalpackages/scotch/install" 72 72 73 73 #Development packages 74 74 #automake 75 AUTOMAKE_DIR="$ISSM_ TIER/externalpackages/automake/install"75 AUTOMAKE_DIR="$ISSM_DIR/externalpackages/automake/install" 76 76 77 77 #libtool 78 LIBTOOL_DIR="$ISSM_ TIER/externalpackages/libtool/install"78 LIBTOOL_DIR="$ISSM_DIR/externalpackages/libtool/install" 79 79 80 80 #autoconf 81 AUTOCONF_DIR="$ISSM_ TIER/externalpackages/autoconf/install"81 AUTOCONF_DIR="$ISSM_DIR/externalpackages/autoconf/install" 82 82 83 83 #borland … … 88 88 89 89 #TEX2IM 90 TEX2IM_DIR="$ISSM_ TIER/externalpackages/tex2im/install"90 TEX2IM_DIR="$ISSM_DIR/externalpackages/tex2im/install" 91 91 92 92 #sdk … … 94 94 95 95 #ssh 96 SSH_DIR="$ISSM_ TIER/externalpackages/ssh"96 SSH_DIR="$ISSM_DIR/externalpackages/ssh" 97 97 98 98 #valgrind 99 VALGRIND_DIR="$ISSM_ TIER/externalpackages/valgrind/install/bin"99 VALGRIND_DIR="$ISSM_DIR/externalpackages/valgrind/install/bin" 100 100 101 101 #graphviz 102 GRAPHVIZ_DIR="$ISSM_ TIER/externalpackages/graphviz/install/bin"102 GRAPHVIZ_DIR="$ISSM_DIR/externalpackages/graphviz/install/bin" 103 103 104 104 #cppcheck 105 CPPCHECK_DIR="$ISSM_ TIER/externalpackages/cppcheck/install"105 CPPCHECK_DIR="$ISSM_DIR/externalpackages/cppcheck/install" 106 106 107 107 #gdal 108 GDAL_DIR="$ISSM_ TIER/externalpackages/gdal/install"108 GDAL_DIR="$ISSM_DIR/externalpackages/gdal/install" 109 109 110 110 #mercurial 111 MERCURIAL_DIR="$ISSM_ TIER/externalpackages/mercurial/install"111 MERCURIAL_DIR="$ISSM_DIR/externalpackages/mercurial/install" 112 112 113 113 #boost 114 BOOST_DIR="$ISSM_ TIER/externalpackages/boost/install"115 BOOSTROOT="$ISSM_ TIER/externalpackages/boost/install"114 BOOST_DIR="$ISSM_DIR/externalpackages/boost/install" 115 BOOSTROOT="$ISSM_DIR/externalpackages/boost/install" 116 116 117 117 #OpenAnalysis 118 OPENANALYSISROOT="$ISSM_ TIER/externalpackages/openanalysis/install"118 OPENANALYSISROOT="$ISSM_DIR/externalpackages/openanalysis/install" 119 119 120 120 #xerces 121 XERCESROOT="$ISSM_ TIER/externalpackages/xerces/install"122 XERCESCROOT="$ISSM_ TIER/externalpackages/xerces/src"121 XERCESROOT="$ISSM_DIR/externalpackages/xerces/install" 122 XERCESCROOT="$ISSM_DIR/externalpackages/xerces/src" 123 123 124 124 #xaifBooster 125 XAIFBOOSTERROOT="$ISSM_ TIER/externalpackages/xaifbooster/"126 XAIF_DIR="$ISSM_ TIER/externalpackages/xaifbooster/xaifBooster"127 XAIFBOOSTER_HOME="$ISSM_ TIER/externalpackages/xaifbooster/xaifBooster"125 XAIFBOOSTERROOT="$ISSM_DIR/externalpackages/xaifbooster/" 126 XAIF_DIR="$ISSM_DIR/externalpackages/xaifbooster/xaifBooster" 127 XAIFBOOSTER_HOME="$ISSM_DIR/externalpackages/xaifbooster/xaifBooster" 128 128 PLATFORM=x86-Linux 129 129 130 130 #angel 131 ANGELROOT="$ISSM_ TIER/externalpackages/angel/angel"131 ANGELROOT="$ISSM_DIR/externalpackages/angel/angel" 132 132 133 133 #java … … 135 135 136 136 #bbftp 137 BBFTP_DIR="$ISSM_ TIER/externalpackages/bbftp/install"137 BBFTP_DIR="$ISSM_DIR/externalpackages/bbftp/install" 138 138 139 139 #adic2 140 ADIC_DIR="$ISSM_ TIER/externalpackages/adic/install"140 ADIC_DIR="$ISSM_DIR/externalpackages/adic/install" 141 141 142 142 #colpack 143 COLPACK_DIR="$ISSM_ TIER/externalpackages/colpack/install"143 COLPACK_DIR="$ISSM_DIR/externalpackages/colpack/install" 144 144 145 145 #eclipse 146 ECLIPSE_DIR="$ISSM_ TIER/externalpackages/eclipse/install"146 ECLIPSE_DIR="$ISSM_DIR/externalpackages/eclipse/install" 147 147 148 148 #flaim 149 FLAIM_DIR="$ISSM_ TIER/externalpackages/flaim/install"149 FLAIM_DIR="$ISSM_DIR/externalpackages/flaim/install" 150 150 151 151 #appscan 152 APPSCAN_DIR="$ISSM_ TIER/externalpackages/appscan"152 APPSCAN_DIR="$ISSM_DIR/externalpackages/appscan" 153 153 154 154 #cppcheck 155 CPPCHECK_DIR="$ISSM_ TIER/externalpackages/cppcheck/install"155 CPPCHECK_DIR="$ISSM_DIR/externalpackages/cppcheck/install" 156 156 157 157 #rats 158 RATS_DIR="$ISSM_ TIER/externalpackages/rats/install"158 RATS_DIR="$ISSM_DIR/externalpackages/rats/install" 159 159 160 160 #dyson 161 DYSON_DIR="$ISSM_ TIER/externalpackages/dyson/"161 DYSON_DIR="$ISSM_DIR/externalpackages/dyson/" 162 162 163 163 #cmake 164 CMAKE_DIR="$ISSM_ TIER/externalpackages/cmake/install"164 CMAKE_DIR="$ISSM_DIR/externalpackages/cmake/install" 165 165 166 166 #shapelib 167 SHAPELIB_DIR="$ISSM_ TIER/externalpackages/shapelib/install"167 SHAPELIB_DIR="$ISSM_DIR/externalpackages/shapelib/install" 168 168 169 169 #cccl 170 CCCL_DIR="$ISSM_ TIER/externalpackages/cccl/install"170 CCCL_DIR="$ISSM_DIR/externalpackages/cccl/install" 171 171 172 172 #packagemaker 173 PACKAGEMAKER_DIR="$ISSM_ TIER/externalpackages/packagemaker/install"173 PACKAGEMAKER_DIR="$ISSM_DIR/externalpackages/packagemaker/install" 174 174 175 175 #android-dev-dir 176 ANDROID_DIR="$ISSM_ TIER/externalpackages/android"176 ANDROID_DIR="$ISSM_DIR/externalpackages/android" 177 177 178 178 #android-ndk … … 186 186 187 187 #gsl 188 GSL_DIR="$ISSM_ TIER/externalpackages/gsl/install"188 GSL_DIR="$ISSM_DIR/externalpackages/gsl/install" 189 189 190 190 #gnu make 191 GMAKE_DIR="$ISSM_ TIER/externalpackages/gmake/install"191 GMAKE_DIR="$ISSM_DIR/externalpackages/gmake/install" 192 192 193 193 #PYTHON 194 PYTHON_DIR="$ISSM_ TIER/externalpackages/python/install"194 PYTHON_DIR="$ISSM_DIR/externalpackages/python/install" 195 195 196 196 #MODELE 197 MODELE_DIR="$ISSM_ TIER/externalpackages/modelE"197 MODELE_DIR="$ISSM_DIR/externalpackages/modelE"
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