Changeset 12156


Ignore:
Timestamp:
05/01/12 07:28:35 (13 years ago)
Author:
Mathieu Morlighem
Message:

Changing ISSM_TIER to ISSM_DIR

Location:
issm/trunk-jpl/externalpackages
Files:
69 edited

Legend:

Unmodified
Added
Removed

  • issm/trunk-jpl/externalpackages/adic/install.sh

    r11128 r12156  
    1919cd build
    2020../source/configure \
    21         --with-rose=$ISSM_TIER/externalpackages/rose/install \
    22         --with-openanalysis=$ISSM_TIER/externalpackages/openanalysis/openanalysis/x86_64-Linux \
    23         --with-boost=$ISSM_TIER/externalpackages/boost/install \
    24         --with-xerces=$ISSM_TIER/externalpackages/xerces/src \
    25         --with-xaifbooster=$ISSM_TIER/externalpackages/xaifbooster/xaifBooster \
    26         --with-colpack=$ISSM_TIER/externalpackages/colpack/install\
    27         --prefix=$ISSM_TIER/externalpackages/adic/install
     21        --with-rose=$ISSM_DIR/externalpackages/rose/install \
     22        --with-openanalysis=$ISSM_DIR/externalpackages/openanalysis/openanalysis/x86_64-Linux \
     23        --with-boost=$ISSM_DIR/externalpackages/boost/install \
     24        --with-xerces=$ISSM_DIR/externalpackages/xerces/src \
     25        --with-xaifbooster=$ISSM_DIR/externalpackages/xaifbooster/xaifBooster \
     26        --with-colpack=$ISSM_DIR/externalpackages/colpack/install\
     27        --prefix=$ISSM_DIR/externalpackages/adic/install
    2828if [ -z $1 ]; then
    2929        make

  • issm/trunk-jpl/externalpackages/adolc/install.sh

    r11737 r12156  
    2020
    2121./configure \
    22         --prefix=$ISSM_TIER/externalpackages/adolc/install \
     22        --prefix=$ISSM_DIR/externalpackages/adolc/install \
    2323        --enable-sparse \
    2424        --enable-docexa \

  • issm/trunk-jpl/externalpackages/android/android-sdk/install.sh

    r12130 r12156  
    4242
    4343        #Once this is done, we need to install an emulator. Location will default to ~/.android/avd,
    44         #which we will move to $ISSM_TIER/externalpackages/android-emulators. 
     44        #which we will move to $ISSM_DIR/externalpackages/android-emulators. 
    4545        #For now, it's called: Android-4.0.3
    4646

  • issm/trunk-jpl/externalpackages/autoconf/install.sh

    r11456 r12156  
    1515#Compile autoconf
    1616cd src
    17 ./configure --prefix="$ISSM_TIER/externalpackages/autoconf/install"
     17./configure --prefix="$ISSM_DIR/externalpackages/autoconf/install"
    1818make 
    1919make install

  • issm/trunk-jpl/externalpackages/automake/install.sh

    r11456 r12156  
    1313#Compile automake
    1414cd src
    15 ./configure --prefix="$ISSM_TIER/externalpackages/automake/install"
     15./configure --prefix="$ISSM_DIR/externalpackages/automake/install"
    1616make 
    1717make install

  • issm/trunk-jpl/externalpackages/bbftp/install.sh

    r11101 r12156  
    1919#Configure and compile
    2020cd bbftpc
    21 ./configure --prefix=$ISSM_TIER/externalpackages/bbftp/install
     21./configure --prefix=$ISSM_DIR/externalpackages/bbftp/install
    2222make
    2323make install

  • issm/trunk-jpl/externalpackages/boost/install.sh

    r12020 r12156  
    2222cd src
    2323./bootstrap.sh \
    24         --prefix="$ISSM_TIER/externalpackages/boost/install" \
     24        --prefix="$ISSM_DIR/externalpackages/boost/install" \
    2525        --with-python=python3.2 \
    26         --with-python-root="$ISSM_TIER/externalpackages/python/install"
     26        --with-python-root="$ISSM_DIR/externalpackages/python/install"
    2727
    2828#Compile boost

  • issm/trunk-jpl/externalpackages/bsdtar/install-win7.sh

    r11496 r12156  
    1313
    1414cd src
    15 ./configure --prefix="$ISSM_TIER/externalpackages/bsdtar/install"
     15./configure --prefix="$ISSM_DIR/externalpackages/bsdtar/install"
    1616make
    1717make install

  • issm/trunk-jpl/externalpackages/cccl/install-win7.orig.sh

    r11429 r12156  
    1515
    1616#Compile
    17 ./configure --prefix="$ISSM_TIER/externalpackages/cccl/install"
     17./configure --prefix="$ISSM_DIR/externalpackages/cccl/install"
    1818
    1919make

  • issm/trunk-jpl/externalpackages/cmake/install.sh

    r11128 r12156  
    1414#Compile cmake
    1515cd install
    16 ./bootstrap --prefix=$ISSM_TIER/externalpackages/cmake/install
     16./bootstrap --prefix=$ISSM_DIR/externalpackages/cmake/install
    1717if [ -z $1 ]; then
    1818        make

  • issm/trunk-jpl/externalpackages/cppcheck/install.sh

    r11128 r12156  
    1717        make -j $1
    1818fi 
    19 make install PREFIX=$ISSM_TIER/externalpackages/cppcheck/install
     19make install PREFIX=$ISSM_DIR/externalpackages/cppcheck/install
    2020cd ..

  • issm/trunk-jpl/externalpackages/dakota/install-altix64-cosmos.sh

    r11101 r12156  
    2929cd src
    3030./configure \
    31         --prefix="$ISSM_TIER/externalpackages/dakota/install" \
     31        --prefix="$ISSM_DIR/externalpackages/dakota/install" \
    3232        --without-graphics  \
    3333        --with-pic \

  • issm/trunk-jpl/externalpackages/dakota/install-linux64-astrid.sh

    r11109 r12156  
    2929cd src
    3030./configure \
    31         --prefix="$ISSM_TIER/externalpackages/dakota/install" \
     31        --prefix="$ISSM_DIR/externalpackages/dakota/install" \
    3232        --without-graphics  \
    3333        --with-pic \

  • issm/trunk-jpl/externalpackages/dakota/install-linux64-murdo.sh

    r11568 r12156  
    2929cd src
    3030./configure \
    31         --prefix="$ISSM_TIER/externalpackages/dakota/install" \
     31        --prefix="$ISSM_DIR/externalpackages/dakota/install" \
    3232        --without-graphics  \
    3333        --with-pic \

  • issm/trunk-jpl/externalpackages/dakota/install-macosx64.sh

    r11626 r12156  
    2929cd src
    3030./configure \
    31    --prefix="$ISSM_TIER/externalpackages/dakota/install" \
     31   --prefix="$ISSM_DIR/externalpackages/dakota/install" \
    3232   --without-graphics  \
    3333   --with-pic \
    3434   --disable-mpi \
    35    --with-blas="-L$ISSM_TIER/externalpackages/petsc/install/lib -lfblas " \
    36    --with-lapack="-L$ISSM_TIER/externalpackages/petsc/install/lib -lflapack -lPLAPACK "
     35   --with-blas="-L$ISSM_DIR/externalpackages/petsc/install/lib -lfblas " \
     36   --with-lapack="-L$ISSM_DIR/externalpackages/petsc/install/lib -lflapack -lPLAPACK "
    3737cd ..
    3838

  • issm/trunk-jpl/externalpackages/dakota/install-pleiades.sh

    r11101 r12156  
    2929cd src
    3030./configure \
    31         --prefix="$ISSM_TIER/externalpackages/dakota/install" \
     31        --prefix="$ISSM_DIR/externalpackages/dakota/install" \
    3232        --without-graphics  \
    3333        --with-pic \

  • issm/trunk-jpl/externalpackages/doxygen/install.sh

    r11241 r12156  
    88
    99#Configure doxygen
    10 cd install && ./configure --prefix "$ISSM_TIER/externalpackages/doxygen/install"
     10cd install && ./configure --prefix "$ISSM_DIR/externalpackages/doxygen/install"
    1111if [ -z $1 ]; then
    1212        make

  • issm/trunk-jpl/externalpackages/gdal/install.sh

    r11128 r12156  
    1717cd src
    1818./configure \
    19         --prefix="$ISSM_TIER/externalpackages/gdal/install" \
     19        --prefix="$ISSM_DIR/externalpackages/gdal/install" \
    2020        --without-python \
    2121        --with-netcdf=no \

  • issm/trunk-jpl/externalpackages/gmake/install.sh

    r11748 r12156  
    1616
    1717#Configure and compile:
    18 ./configure --prefix=$ISSM_TIER/externalpackages/gmake/install
     18./configure --prefix=$ISSM_DIR/externalpackages/gmake/install
    1919
    2020if [ -z $1 ]; then

  • issm/trunk-jpl/externalpackages/graphviz/install.sh

    r11128 r12156  
    1414#Configure dakota
    1515cd src
    16 ./configure --prefix="$ISSM_TIER/externalpackages/graphviz/install"
     16./configure --prefix="$ISSM_DIR/externalpackages/graphviz/install"
    1717cd ..
    1818

  • issm/trunk-jpl/externalpackages/gsl/install-android-4.0.sh

    r12115 r12156  
    2424    LIB_EXT=a\
    2525    --host="arm-linux"\
    26         --prefix="$ISSM_TIER/externalpackages/gsl/install"
     26        --prefix="$ISSM_DIR/externalpackages/gsl/install"
    2727
    2828#Compile gsl

  • issm/trunk-jpl/externalpackages/gsl/install-linux64-murdo.sh

    r11773 r12156  
    1616
    1717./configure \
    18         --prefix="$ISSM_TIER/externalpackages/gsl/install"
     18        --prefix="$ISSM_DIR/externalpackages/gsl/install"
    1919
    2020#Compile gsl

  • issm/trunk-jpl/externalpackages/gsl/install-macosx64.sh

    r11747 r12156  
    1818
    1919./configure \
    20         --prefix="$ISSM_TIER/externalpackages/gsl/install"
     20        --prefix="$ISSM_DIR/externalpackages/gsl/install"
    2121
    2222#Compile gsl

  • issm/trunk-jpl/externalpackages/latex2rtf/install.sh

    r11101 r12156  
    1010#Compile
    1111cd install
    12 export PREFIX="$ISSM_TIER/externalpackages/latex2rtf/install/"
     12export PREFIX="$ISSM_DIR/externalpackages/latex2rtf/install/"
    1313make

  • issm/trunk-jpl/externalpackages/libtool/install.sh

    r11115 r12156  
    1313#Compile libtool
    1414cd src
    15 ./configure --prefix="$ISSM_TIER/externalpackages/libtool/install"
     15./configure --prefix="$ISSM_DIR/externalpackages/libtool/install"
    1616make 
    1717make install

  • issm/trunk-jpl/externalpackages/metis/install-5.0.1-linux64.sh

    r11128 r12156  
    1717
    1818#Compile metis
    19 make config prefix="$ISSM_TIER/externalpackages/metis/install"
     19make config prefix="$ISSM_DIR/externalpackages/metis/install"
    2020make install

  • issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-altix64.sh

    r11128 r12156  
    1818export FFLAGS="$FFLAGS -fPIC"
    1919./configure \
    20         --prefix="$ISSM_TIER/externalpackages/mpich2/install" \
     20        --prefix="$ISSM_DIR/externalpackages/mpich2/install" \
    2121        --enable-sharedlibs=gcc \
    2222        --enable-f91=gfortran

  • issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-linux64.sh

    r11128 r12156  
    1818export FFLAGS="$FFLAGS -fPIC"
    1919./configure \
    20         --prefix="$ISSM_TIER/externalpackages/mpich2/install" \
     20        --prefix="$ISSM_DIR/externalpackages/mpich2/install" \
    2121        --enable-sharedlibs=gcc \
    2222        --enable-f91=gfortran

  • issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-macosx32.sh

    r11128 r12156  
    1717export CFLAGS=" -m32"
    1818./configure \
    19         --prefix="$ISSM_TIER/externalpackages/mpich2/install" \
     19        --prefix="$ISSM_DIR/externalpackages/mpich2/install" \
    2020        --enable-f91=gfortran \
    2121        --enable-sharedlibs=osx-gcc

  • issm/trunk-jpl/externalpackages/mpich2/install-1.0.2-win32.sh

    r11128 r12156  
    1717export CFLAGS="$CFLAGS -fPIC"
    1818export FFLAGS="$FFLAGS -fPIC"
    19 ./configure --prefix="$ISSM_TIER/externalpackages/mpich2/install"
     19./configure --prefix="$ISSM_DIR/externalpackages/mpich2/install"
    2020
    2121#Apply Patch to examples

  • issm/trunk-jpl/externalpackages/mpich2/install-1.4-linux64.sh

    r11128 r12156  
    1717export FFLAGS="$FFLAGS -fPIC"
    1818./configure \
    19         --prefix="$ISSM_TIER/externalpackages/mpich2/install" \
     19        --prefix="$ISSM_DIR/externalpackages/mpich2/install" \
    2020        --enable-shared \
    2121        --enable-sharedlibs=gcc \

  • issm/trunk-jpl/externalpackages/mpich2/install-1.4-macosx32.sh

    r11525 r12156  
    1919export CPPFLAGS=" -arch i386"
    2020./configure \
    21         --prefix="$ISSM_TIER/externalpackages/mpich2/install" \
     21        --prefix="$ISSM_DIR/externalpackages/mpich2/install" \
    2222        --enable-f91=gfortran \
    2323        --enable-sharedlibs=osx-gcc \

  • issm/trunk-jpl/externalpackages/mpich2/install-1.4-macosx64.sh

    r11128 r12156  
    1919export CXXFLAGS=" -arch x86_64"
    2020./configure \
    21         --prefix="$ISSM_TIER/externalpackages/mpich2/install" \
     21        --prefix="$ISSM_DIR/externalpackages/mpich2/install" \
    2222        --enable-f91 \
    2323        --enable-sharedlibs=osx-gcc \

  • issm/trunk-jpl/externalpackages/ncview/install.sh

    r11101 r12156  
    1515cd install
    1616./configure \
    17         --prefix "$ISSM_TIER/externalpackages/ncview/install" \
     17        --prefix "$ISSM_DIR/externalpackages/ncview/install" \
    1818        --x-libraries=/usr/X11/lib/ \
    1919        --x-includes=/usr/X11/include/ \
    20         --with-netcdf_incdir="$ISSM_TIER/externalpackages/netcdf/install/include/" \
    21         --with-netcdf_libdir="$ISSM_TIER/externalpackages/netcdf/install/lib/"
     20        --with-netcdf_incdir="$ISSM_DIR/externalpackages/netcdf/install/include/" \
     21        --with-netcdf_libdir="$ISSM_DIR/externalpackages/netcdf/install/lib/"
    2222
    2323make

  • issm/trunk-jpl/externalpackages/netcdf/install.sh

    r11128 r12156  
    1515#Configure and compile
    1616cd install
    17 ./configure  --prefix="$ISSM_TIER/externalpackages/netcdf/install"
     17./configure  --prefix="$ISSM_DIR/externalpackages/netcdf/install"
    1818if [ -z $1 ]; then
    1919        make

  • issm/trunk-jpl/externalpackages/pcre/install.sh

    r11128 r12156  
    1313#Configure doxygen
    1414cd install
    15 ./configure --prefix "$ISSM_TIER/externalpackages/python/install"
     15./configure --prefix "$ISSM_DIR/externalpackages/python/install"
    1616make
    1717make install

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-altix64-castor.sh

    r11106 r12156  
    1717        cd install
    1818        ./config/configure.py \
    19                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     19                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    2020                --with-batch=1  \
    2121                --ISSM_ARCH=$ISSM_ARCH \
    … …  
    4141        cd install
    4242        ./config/configure.py  \
    43                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     43                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    4444                --with-batch=1  \
    4545                --ISSM_ARCH=$ISSM_ARCH \

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-cosmos.sh

    r11128 r12156  
    1212#configure
    1313cd install
    14 PETSC_DIR=$ISSM_TIER/externalpackages/petsc/install
     14PETSC_DIR=$ISSM_DIR/externalpackages/petsc/install
    1515./config/configure.py  \
    1616        --prefix=$PETSC_DIR \

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-linux64-astrid.sh

    r11128 r12156  
    1313cd install
    1414./config/configure.py  \
    15         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16         --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     15        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16        --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    1717        --PETSC_ARCH=linux-gnu-amd64 \
    18         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" \
     18        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" \
    1919        --with-fc=gfortran \
    2020        --with-debugging=1 \
    … …  
    2525        --download-blas=yes \
    2626        --download-f-blas-lapack=yes \
    27         --FFLAGS=-I$ISSM_TIER/externalpackages/mpich2/install/include \
     27        --FFLAGS=-I$ISSM_DIR/externalpackages/mpich2/install/include \
    2828        --download-plapack=yes \
    2929        --COPTFLAGS="-march=opteron -O2" \

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx32-eric.sh

    r11128 r12156  
    1717        cd install
    1818        ./config/configure.py  \
    19                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    20                 --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     19                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     20                --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    2121                --PETSC_ARCH=macosx-gnu \
    22                 --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" \
     22                --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" \
    2323                --with-fc=/usr/local/bin/gfortran \
    2424                --with-debugging=0 \
    … …  
    2929                --download-blas=yes \
    3030                --download-f-blas-lapack=yes \
    31                 --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran  -fPIC -arch i386" \
     31                --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran  -fPIC -arch i386" \
    3232                --download-plapack=yes \
    3333                --CXXFLAGS=" -fPIC -arch i386" \
    … …  
    4343        cd install
    4444        ./config/configure.py  \
    45                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    46                 --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     45                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     46                --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    4747                --PETSC_ARCH=macosx-gnu \
    48                 --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" \
     48                --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" \
    4949                --with-fc=/usr/local/bin/gfortran \
    5050                --with-debugging=0 \
    5151                --with-shared=0 \
    52                 --with-mumps-dir=$ISSM_TIER/externalpackages/petsc/install/externalpackages/MUMPS_4.6.3  \
     52                --with-mumps-dir=$ISSM_DIR/externalpackages/petsc/install/externalpackages/MUMPS_4.6.3  \
    5353                --download-scalapack=yes \
    5454                --download-blacs=yes \
    5555                --download-blas=yes \
    5656                --download-f-blas-lapack=yes \
    57                 --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran  -fPIC -arch i386" \
     57                --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran  -fPIC -arch i386" \
    5858                --download-plapack=yes \
    5959                --CXXFLAGS=" -fPIC -arch i386" \

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx32-ogive.sh

    r11128 r12156  
    1212#configure
    1313cd install
    14 ./config/configure.py  --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    15         --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     14./config/configure.py  --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     15        --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    1616        --PETSC_ARCH=macosx-gnu \
    17         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" \
     17        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" \
    1818        --with-fc=/usr/local/bin/gfortran \
    1919        --with-debugging=0 \
    … …  
    2424        --download-blas=yes \
    2525        --download-f-blas-lapack=yes \
    26         --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran" \
     26        --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran" \
    2727        --download-plapack=yes
    2828

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-macosx64.sh

    r11737 r12156  
    1313cd src
    1414./config/configure.py \
    15   --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16   --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     15  --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16  --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    1717  --PETSC_ARCH=macosx-gnu \
    18   --with-mpi-dir="$ISSM_TIER/externalpackages/mpich2/install" \
     18  --with-mpi-dir="$ISSM_DIR/externalpackages/mpich2/install" \
    1919  --with-debugging=0 \
    2020  --with-shared-libraries=0 \

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-pleiades.sh

    r11106 r12156  
    1717        cd install
    1818        ./config/configure.py  \
    19                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     19                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    2020                --with-batch=1  \
    2121                --PETSC_ARCH=$ISSM_ARCH \
    … …  
    4444        cd install
    4545        ./config/configure.py  \
    46                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     46                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    4747                --with-batch=1  \
    4848                --PETSC_ARCH=$ISSM_ARCH \

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-win32-eric.sh

    r11128 r12156  
    1414./config/configure.py  \
    1515        --with-parallel-no \
    16         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     16        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    1717        --PETSC_ARCH=cygwin-intel \
    18         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" \
     18        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" \
    1919        --with-debugging=0 \
    2020        --with-mpi=0 \

  • issm/trunk-jpl/externalpackages/petsc/install-2.3.2-win7.sh

    r11386 r12156  
    1414./config/configure.py  \
    1515        --with-parallel-no \
    16         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     16        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    1717        --PETSC_ARCH=cygwin-intel \
    18         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/install" \
     18        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/install" \
    1919        --with-debugging=0 \
    2020        --with-mpi=0 \

  • issm/trunk-jpl/externalpackages/petsc/install-3.1-altix64-castor.sh

    r11106 r12156  
    1717        cd src
    1818        ./config/configure.py \
    19           --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    20           --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     19          --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     20          --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    2121          --ISSM_ARCH=$ISSM_ARCH \
    2222          --with-debugging=no \
    … …  
    4141        cd src
    4242        ./config/configure.py \
    43                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    44                 --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     43                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     44                --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    4545                --with-batch=1  \
    4646                --ISSM_ARCH=$ISSM_ARCH \

  • issm/trunk-jpl/externalpackages/petsc/install-3.1-cosmos.sh

    r11128 r12156  
    1313cd src
    1414./config/configure.py \
    15         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     15        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    1717        --with-batch=1  \
    1818        --ISSM_ARCH=$ISSM_ARCH \

  • issm/trunk-jpl/externalpackages/petsc/install-3.1-linux64-astrid.sh

    r11128 r12156  
    1313cd src
    1414./config/configure.py \
    15  --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16  --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     15 --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16 --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    1717 --PETSC_ARCH=linux-gnu-amd64 \
    18  --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     18 --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    1919 --with-debugging=0 \
    2020 --with-shared=0 \
    … …  
    2525 --download-f-blas-lapack=yes \
    2626 --download-parmetis=yes \
    27  --FFLAGS=-I$ISSM_TIER/externalpackages/mpich2/install/include \
     27 --FFLAGS=-I$ISSM_DIR/externalpackages/mpich2/install/include \
    2828 --download-plapack=yes \
    2929 --COPTFLAGS="-march=opteron -O2" \

  • issm/trunk-jpl/externalpackages/petsc/install-3.1-macosx32-mathieu.sh

    r11128 r12156  
    1313cd src
    1414./config/configure.py  \
    15  --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16  --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     15 --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16 --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    1717 --PETSC_ARCH=macosx-gnu \
    18  --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     18 --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    1919 --with-debugging=0 \
    2020 --with-shared=0 \
    … …  
    2525 --download-f-blas-lapack=yes \
    2626 --download-plapack=yes \
    27  --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -arch i386" \
     27 --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -arch i386" \
    2828 --COPTFLAGS="-march=opteron -O2 -arch i386" \
    2929 --FOPTFLAGS="-march=opteron -O2 -arch i386" \

  • issm/trunk-jpl/externalpackages/petsc/install-3.1-macosx32-ogive.sh

    r11128 r12156  
    1313cd src
    1414./config/configure.py \
    15         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
    17         --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     15        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
     17        --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    1818        --PETSC_ARCH=macosx-gnu \
    1919        --with-fc=/usr/local/bin/gfortran \
    … …  
    3030        --FOPTFLAGS="-march=opteron -O2 " \
    3131        --CXXOPTFLAGS="-march=opteron -O2 " \
    32         --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -L$ISSM_TIER/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran "
     32        --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -L$ISSM_DIR/externalpackages/mpich2/install/lib -L/usr/local/bin -lmpich -lpmpich -lgfortran "
    3333
    3434#Compile petsc and install it

  • issm/trunk-jpl/externalpackages/petsc/install-3.1-pleiades.sh

    r11106 r12156  
    1717        cd src
    1818        ./config/configure.py \
    19                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     19                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    2020                --with-batch=1  \
    2121                --PETSC_ARCH="$ISSM_ARCH" \
    22                 --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     22                --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    2323                --with-debugging=no \
    2424                --with-shared=0 \
    … …  
    4444        cd src
    4545        ./config/configure.py \
    46          --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     46         --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    4747         --with-batch=1  \
    4848         --PETSC_ARCH="$ISSM_ARCH" \
    49          --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     49         --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    5050         --with-debugging=no \
    5151         --with-shared=0 \
    … …  
    5757         --download-scalapack=yes \
    5858         --download-blacs=yes  \
    59          --with-plapack-dir=$ISSM_TIER/externalpackages/petsc/src/$ISSM_ARCH \
     59         --with-plapack-dir=$ISSM_DIR/externalpackages/petsc/src/$ISSM_ARCH \
    6060         --download-parmetis=yes \
    6161         --FFLAGS=-I/usr/include \

  • issm/trunk-jpl/externalpackages/petsc/install-3.1-win7.sh

    r11889 r12156  
    1414./config/configure.py  \
    1515        --with-parallel-no \
    16         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     16        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    1717        --PETSC_ARCH=cygwin-intel \
    18         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     18        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    1919        --with-debugging=0 \
    2020        --with-mpi=0 \
    … …  
    2626
    2727#./config/configure.py  \
    28 # --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    29 # --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     28# --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     29# --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    3030# --PETSC_ARCH=macosx-gnu \
    31 # --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     31# --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    3232# --with-debugging=0 \
    3333# --with-shared=0 \
    … …  
    3838# --download-f-blas-lapack=yes \
    3939# --download-plapack=yes \
    40 # --FFLAGS="-I$ISSM_TIER/externalpackages/mpich2/install/include -arch i386" \
     40# --FFLAGS="-I$ISSM_DIR/externalpackages/mpich2/install/include -arch i386" \
    4141# --COPTFLAGS="-march=opteron -O2 -arch i386" \
    4242# --FOPTFLAGS="-march=opteron -O2 -arch i386" \

  • issm/trunk-jpl/externalpackages/petsc/install-3.2-greenplanet.sh

    r11382 r12156  
    1313cd src
    1414./config/configure.py \
    15         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     15        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    1717        --PETSC_ARCH="$ISSM_ARCH" \
    1818        --with-batch=1 \

  • issm/trunk-jpl/externalpackages/petsc/install-3.2-linux64.sh

    r11167 r12156  
    1313cd src
    1414./config/configure.py \
    15         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16         --with-mpi-dir=$ISSM_TIER/externalpackages/mpich2/install \
     15        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16        --with-mpi-dir=$ISSM_DIR/externalpackages/mpich2/install \
    1717        --with-clanguage=C++ \
    1818        --PETSC_ARCH=linux-gnu-amd64 \
    19         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     19        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    2020        --with-debugging=0 \
    2121        --with-shared-libraries=0 \

  • issm/trunk-jpl/externalpackages/petsc/install-3.2-macosx64.sh

    r11128 r12156  
    1313cd src
    1414./config/configure.py \
    15   --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    16   --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     15  --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     16  --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    1717  --PETSC_ARCH=macosx-gnu \
    18   --with-mpi-dir="$ISSM_TIER/externalpackages/mpich2/install" \
     18  --with-mpi-dir="$ISSM_DIR/externalpackages/mpich2/install" \
    1919  --with-debugging=0 \
    2020  --with-shared-libraries=0 \

  • issm/trunk-jpl/externalpackages/petsc/install-3.2-pleiades.sh

    r11110 r12156  
    1717        cd src
    1818        ./config/configure.py \
    19                 --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     19                --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    2020                --with-batch=1  \
    2121                --PETSC_ARCH="$ISSM_ARCH" \
    22                 --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     22                --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    2323                --with-debugging=0 \
    2424                --with-shared-libraries=0 \
    … …  
    4444        cd src
    4545        ./config/configure.py \
    46          --prefix="$ISSM_TIER/externalpackages/petsc/install" \
     46         --prefix="$ISSM_DIR/externalpackages/petsc/install" \
    4747         --with-batch=1  \
    4848         --PETSC_ARCH="$ISSM_ARCH" \
    49          --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     49         --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    5050         --with-debugging=0 \
    5151         --with-shared-libraries=0 \
    … …  
    5757         --download-scalapack=yes \
    5858         --download-blacs=yes  \
    59          --with-plapack-dir=$ISSM_TIER/externalpackages/petsc/src/$ISSM_ARCH \
     59         --with-plapack-dir=$ISSM_DIR/externalpackages/petsc/src/$ISSM_ARCH \
    6060         --download-parmetis=yes \
    6161         --FFLAGS=-I/usr/include \

  • issm/trunk-jpl/externalpackages/petsc/install-dev-linux64.sh

    r12107 r12156  
    2929        cd src
    3030        ./config/configure.py \
    31         --prefix="$ISSM_TIER/externalpackages/petsc/install" \
    32         --with-mpi-dir="$ISSM_TIER/externalpackages/mpich2/install" \
     31        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
     32        --with-mpi-dir="$ISSM_DIR/externalpackages/mpich2/install" \
    3333        --with-clanguage=C++ \
    3434        --PETSC_ARCH=linux-gnu-amd64 \
    35         --PETSC_DIR="$ISSM_TIER/externalpackages/petsc/src" \
     35        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
    3636        --with-debugging=0 \
    3737        --with-shared-libraries=0 \

  • issm/trunk-jpl/externalpackages/python/install.sh

    r11949 r12156  
    2020#Configure doxygen
    2121cd src
    22 ./configure --prefix="$ISSM_TIER/externalpackages/python/install" --enable-framework="$ISSM_TIER/externalpackages/python/install"
     22./configure --prefix="$ISSM_DIR/externalpackages/python/install" --enable-framework="$ISSM_DIR/externalpackages/python/install"
    2323if [ -z $1 ]; then
    2424        make

  • issm/trunk-jpl/externalpackages/qhull/install.sh

    r11128 r12156  
    1515#Configure qhull
    1616cd src
    17 ./configure --prefix="$ISSM_TIER/externalpackages/qhull/install"
     17./configure --prefix="$ISSM_DIR/externalpackages/qhull/install"
    1818make
    1919make install

  • issm/trunk-jpl/externalpackages/rats/install.sh

    r11128 r12156  
    1212#compile
    1313cd src
    14 ./configure --prefix=$ISSM_TIER/externalpackages/rats/install
     14./configure --prefix=$ISSM_DIR/externalpackages/rats/install
    1515make
    1616make install

  • issm/trunk-jpl/externalpackages/rose/install.sh

    r11128 r12156  
    1515cd build
    1616../source/configure \
    17         --prefix=$ISSM_TIER/externalpackages/rose/install \
    18         --with-boost=$ISSM_TIER/externalpackages/boost/install\
    19         --srcdir=$ISSM_TIER/externalpackages/rose/source
     17        --prefix=$ISSM_DIR/externalpackages/rose/install \
     18        --with-boost=$ISSM_DIR/externalpackages/boost/install\
     19        --srcdir=$ISSM_DIR/externalpackages/rose/source
    2020
    2121if [ -z $1 ]; then

  • issm/trunk-jpl/externalpackages/swig/install.sh

    r11113 r12156  
    1313#Copy pcre prototype in include directory
    1414cd install
    15 #cp $ISSM_TIER/externalpackages/pcre/install/pcre.h  ./Source/Include/
    16 #cp $ISSM_TIER/externalpackages/pcre/install/.libs/*  ./Source/Include/
    17 export CFLAGS="$CFLAGS -I$ISSM_TIER/externalpackages/pcre/install"
    18 export LDFLAGS="-L$ISSM_TIER/externalpackages/pcre/install/.libs/"
     15#cp $ISSM_DIR/externalpackages/pcre/install/pcre.h  ./Source/Include/
     16#cp $ISSM_DIR/externalpackages/pcre/install/.libs/*  ./Source/Include/
     17export CFLAGS="$CFLAGS -I$ISSM_DIR/externalpackages/pcre/install"
     18export LDFLAGS="-L$ISSM_DIR/externalpackages/pcre/install/.libs/"
    1919export LIBS="-lpcre"
    2020#Configure doxygen
    2121./configure \
    22  --prefix="$ISSM_TIER/externalpackages/python/install" \
    23  --with-pcre-prefix="$ISSM_TIER/externalpackages/pcre/install" \
    24  --with-pcre-exec-prefix="$ISSM_TIER/externalpackages/pcre/install"
     22 --prefix="$ISSM_DIR/externalpackages/python/install" \
     23 --with-pcre-prefix="$ISSM_DIR/externalpackages/pcre/install" \
     24 --with-pcre-exec-prefix="$ISSM_DIR/externalpackages/pcre/install"
    2525make
    2626make install

  • issm/trunk-jpl/externalpackages/tao/install.sh

    r11504 r12156  
    1414rm -rf tao-2.0-p3
    1515cd install
    16 export TAO_DIR="$ISSM_TIER/externalpackages/tao/install/"
     16export TAO_DIR="$ISSM_DIR/externalpackages/tao/install/"
    1717
    1818#petsc needs to be compiled with --with-clanguage=C++

  • issm/trunk-jpl/externalpackages/valgrind/install-altix64.sh

    r11187 r12156  
    1414#configure
    1515cd install
    16 ./configure --prefix="$ISSM_TIER/externalpackages/valgrind/install"
     16./configure --prefix="$ISSM_DIR/externalpackages/valgrind/install"
    1717
    1818#Compile valgrind

  • issm/trunk-jpl/externalpackages/valgrind/install-linux64.sh

    r11187 r12156  
    1414#configure
    1515cd install
    16 ./configure  --prefix="$ISSM_TIER/externalpackages/valgrind/install"
     16./configure  --prefix="$ISSM_DIR/externalpackages/valgrind/install"
    1717
    1818#Compile valgrind

  • issm/trunk-jpl/externalpackages/valgrind/install-macosx32.sh

    r11187 r12156  
    1414#configure
    1515cd install
    16 ./configure  --prefix="$ISSM_TIER/externalpackages/valgrind/install" --enable-only32bit
     16./configure  --prefix="$ISSM_DIR/externalpackages/valgrind/install" --enable-only32bit
    1717
    1818#Compile valgrind

  • issm/trunk-jpl/externalpackages/valgrind/install-macosx64.sh

    r11187 r12156  
    1414#configure
    1515cd install
    16 ./configure  --prefix="$ISSM_TIER/externalpackages/valgrind/install" --enable-only64bit
     16./configure  --prefix="$ISSM_DIR/externalpackages/valgrind/install" --enable-only64bit
    1717
    1818#Compile valgrind

  • issm/trunk-jpl/externalpackages/valgrind/install-win32.sh

    r11187 r12156  
    1414#configure
    1515cd install
    16 ./configure  --prefix="$ISSM_TIER/externalpackages/valgrind/install"
     16./configure  --prefix="$ISSM_DIR/externalpackages/valgrind/install"
    1717
    1818#Compile valgrind

  • issm/trunk-jpl/externalpackages/vim/install.sh

    r11128 r12156  
    1919cd src/src
    2020./configure \
    21         --prefix "$ISSM_TIER/externalpackages/vim/install" \
     21        --prefix "$ISSM_DIR/externalpackages/vim/install" \
    2222        --with-gcc "/usr/bin/gcc"
    2323
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