Index: /issm/trunk-jpl/Makefile.am
===================================================================
--- /issm/trunk-jpl/Makefile.am	(revision 11472)
+++ /issm/trunk-jpl/Makefile.am	(revision 11473)
@@ -1,2 +1,3 @@
 EXTRA_DIST = reconf  scripts test INSTALLICE LICENSE m4 examples cron etc doc packages ChangeLogCielo ChangeLogIce contributors.txt run READMEICE startup.m startup.m startup.m startup.m  todo MakefileIce
 SUBDIRS = src bin
+bin_SCRIPTS=config.h startup.m
Index: /issm/trunk-jpl/configure.ac
===================================================================
--- /issm/trunk-jpl/configure.ac	(revision 11472)
+++ /issm/trunk-jpl/configure.ac	(revision 11473)
@@ -20,5 +20,44 @@
 			src/ad/Makefile
 			src/mex/Makefile
+			src/m/Makefile
+			src/m/classes/Makefile
+			src/m/classes/@modellist/Makefile
+			src/m/classes/@pairoptions/Makefile
+			src/m/enum/Makefile
+			src/m/kml/Makefile
+			src/m/model/Makefile
+			src/m/planet/Makefile
+			src/m/qmu/Makefile
+			src/m/shared/Makefile
+			src/m/solutions/Makefile
+			src/m/solvers/Makefile
+			src/m/utils/Makefile
+			src/m/utils/Analysis/Makefile
+			src/m/utils/Array/Makefile
+			src/m/utils/BC/Makefile
+			src/m/utils/Basins/Makefile
+			src/m/utils/Cluster/Makefile
+			src/m/utils/DataProcessing/Makefile
+			src/m/utils/Ecco3/Makefile
+			src/m/utils/Exp/Makefile
+			src/m/utils/Geometry/Makefile
+			src/m/utils/ImageProcessing/Makefile
+			src/m/utils/Interp/Makefile
+			src/m/utils/Kml/Makefile
+			src/m/utils/LatLong/Makefile
+			src/m/utils/Math/Makefile
+			src/m/utils/Meca/Makefile
+			src/m/utils/Mesh/Makefile
+			src/m/utils/Miscellaneous/Makefile
+			src/m/utils/Model/Makefile
+			src/m/utils/Numerics/Makefile
+			src/m/utils/OS/Makefile
+			src/m/utils/Plot/Makefile
+			src/m/utils/Shell/Makefile
+			src/m/utils/String/Makefile
+			src/m/utils/consistency/Makefile
+			src/m/utils/qmu/Makefile
 			bin/Makefile])
 AC_OUTPUT
 
+
Index: /issm/trunk-jpl/src/Makefile.am
===================================================================
--- /issm/trunk-jpl/src/Makefile.am	(revision 11472)
+++ /issm/trunk-jpl/src/Makefile.am	(revision 11473)
@@ -1,4 +1,4 @@
-EXTRA_DIST = m  perl  pro
-SUBDIRS = c mex
+EXTRA_DIST =  perl  pro
+SUBDIRS = c mex m
 
 if ADIC2