source: issm/trunk/test/NightlyRun/runme.m@ 15396

Last change on this file since 15396 was 15396, checked in by Mathieu Morlighem, 12 years ago

merged trunk-jpl and trunk for revision 15394
  • Property svn:executable set to *
File size: 7.7 KB
Line 
1function varargout=runme(varargin)
2%RUNME - test deck for ISSM nightly runs
3%
4% In a test deck directory (tests/Vertification/NightlyRun for example)
5% The following command will launch all the existing tests:
6% >> runme
7% To run the tests 101 and 102:
8% >> runme('id',[101 102])
9% etc...
10%
11% Available options:
12% 'id' followed by the list of ids requested
13% 'exclude' ids to be excluded from the test
14% 'benchmark' 'all' (all of them)
15% 'nightly' (nightly run/ daily run)
16% 'ismip' : validation of ismip-hom tests
17% 'eismint': validation of eismint tests
18% 'thermal': validation of thermal tests
19% 'mesh' : validation of mesh tests
20% 'adolc' : validation of adolc tests
21% 'gia' : validation of gia tests
22% ...
23% 'procedure' 'check' : run the test (default)
24% 'update': update the archive
25%
26% Usage:
27% runme(varargin);
28%
29% Examples:
30% runme;
31% runme('exclude',101);
32% runme('id',102,'procedure','update');
33
34%Get ISSM_DIR variable
35ISSM_DIR=issmdir();
36
37%Check inputs
38% {{{
39if nargout>1
40 help runme
41 error('runme error message: bad usage');
42end
43
44%recover options
45options=pairoptions(varargin{:});
46% }}}
47
48%Process options
49%GET benchmark {{{
50benchmark=getfieldvalue(options,'benchmark','nightly');
51if ~ismember(benchmark,{'all','nightly','ismip','eismint','thermal','mesh','validation','tranforcing','adolc','gia'})
52 disp('runme warning: benchmark not supported, defaulting to test ''nightly''')
53 benchmark='nightly';
54end
55% }}}
56%GET procedure {{{
57procedure=getfieldvalue(options,'procedure','check');
58if ~ismember(procedure,{'check','update'})
59 disp('runme warning: procedure not supported, defaulting to test ''check''')
60 procedure='check';
61end
62% }}}
63%GET output {{{
64output=getfieldvalue(options,'output','none');
65if ~ismember(output,{'nightly','daily','none'})
66 disp('runme warning: output not supported, defaulting to test ''none''')
67 output='none';
68end
69% }}}
70%GET RANK and NUMPROCS for multithreaded runs {{{
71rank=getfieldvalue(options,'rank',1);
72numprocs=getfieldvalue(options,'numprocs',1);
73if (numprocs<rank), numprocs=1; end
74% }}}
75%GET ids {{{
76flist=dir;%use dir, as it seems to act OS independent
77list_ids=[];
78for i=1:numel(flist),
79 if ( strncmp(flist(i).name,'test',4) &... %File name must start with 'test'
80 strncmp(fliplr(flist(i).name),fliplr('.m'),2)&... %File name must end by '.m'
81 ~strcmp(flist(i).name,'test.m')) %File name must be different than 'test.m'
82 id=str2num(flist(i).name(5:end-2));
83 if isempty(id),
84 disp(['WARNING: ignore file ' flist(i).name ]);
85 else
86 list_ids(end+1)=eval(flist(i).name(5:end-2)); %Keep test id only (skip 'test' and '.m')
87 end
88 end
89end
90[i1,i2]=parallelrange(rank,numprocs,length(list_ids)); %Get tests for this cpu only
91list_ids=list_ids(i1:i2);
92
93test_ids=getfieldvalue(options,'id',list_ids);
94test_ids=intersect(test_ids,list_ids);
95% }}}
96%GET exclude {{{
97exclude_ids=getfieldvalue(options,'exclude',[]);
98exclude_ids=[exclude_ids];
99pos=find(ismember(test_ids,exclude_ids));
100test_ids(pos)=[];
101% }}}
102%Process Ids according to benchmarks{{{
103if strcmpi(benchmark,'nightly'),
104 test_ids=intersect(test_ids,[1:999]);
105elseif strcmpi(benchmark,'validation'),
106 test_ids=intersect(test_ids,[1001:1999]);
107elseif strcmpi(benchmark,'ismip'),
108 test_ids=intersect(test_ids,[1101:1199]);
109elseif strcmpi(benchmark,'eismint'),
110 test_ids=intersect(test_ids,[1201:1299]);
111elseif strcmpi(benchmark,'thermal'),
112 test_ids=intersect(test_ids,[1301:1399]);
113elseif strcmpi(benchmark,'mesh'),
114 test_ids=intersect(test_ids,[1401:1499]);
115elseif strcmpi(benchmark,'tranforcing'),
116 test_ids=intersect(test_ids,[1501:1502]);
117elseif strcmpi(benchmark,'referential'),
118 test_ids=intersect(test_ids,[1601:1602]);
119elseif strcmpi(benchmark,'gia'),
120 test_ids=intersect(test_ids,[2001:2100]);
121elseif strcmpi(benchmark,'adolc'),
122 test_ids=intersect(test_ids,[3001:3020]);
123end
124% }}}
125
126%Loop over tests and launch sequence
127root=pwd;
128for id=test_ids,
129 try,
130
131 %Execute test
132 eval(['cd ' root ]);
133 id_string=IdToName(id);
134 eval(['test' num2str(id)]);
135
136 %UPDATE ARCHIVE?
137 archive_name=['Archive' num2str(id) ];
138 if strcmpi(procedure,'update'),
139 delete(['../Archives/' archive_name '.nc'])
140 for k=1:length(field_names),
141 field=field_values{k};
142 % matlab writes the dimensions reversed and matrices transposed into netcdf, so compensate for that
143 nccreate(['../Archives/' archive_name '.nc'],[archive_name '_field' num2str(k)],...
144 'Dimensions',{[archive_name '_field' num2str(k) '_2'] size(field,2) [archive_name '_field' num2str(k) '_1'] size(field,1)},...
145 'Format','classic');
146 ncwrite(['../Archives/' archive_name '.nc'],[archive_name '_field' num2str(k)],transpose(field));
147 end
148 disp(sprintf(['File ./../Archives/' archive_name '.nc saved\n']));
149
150 %ELSE: CHECK TEST
151 else,
152 for k=1:length(field_names),
153
154 try,
155 %Get field and tolerance
156 field=field_values{k};
157 fieldname=field_names{k};
158 tolerance=field_tolerances{k};
159
160 %compare to archive
161 % matlab reads the dimensions reversed and matrices transposed from netcdf, so compensate for that
162 archive=transpose(ncread(['../Archives/' archive_name '.nc'],[archive_name '_field' num2str(k)]));
163 error_diff=full(max(abs(archive(:)-field(:)))/(max(abs(archive))+eps));
164
165 %disp test result
166 if (error_diff>tolerance);
167 disp(sprintf(['ERROR difference: %-7.2g > %7.2g test id: %i test name: %s field: %s'],...
168 error_diff,tolerance,id,id_string,fieldname));
169 else
170 disp(sprintf(['SUCCESS difference: %-7.2g < %7.2g test id: %i test name: %s field: %s'],...
171 error_diff,tolerance,id,id_string,fieldname));
172 end
173
174 catch me2
175
176 %something went wrong, print failure message:
177 directory=strsplit(pwd,'/');
178 message=getReport(me2);
179 if strcmpi(output,'nightly')
180 fid=fopen([ISSM_DIR '/nightlylog/matlaberror.log'], 'at');
181 fprintf(fid,'%s',message);
182 fprintf(fid,'\n------------------------------------------------------------------\n');
183 fclose(fid);
184 disp(sprintf(['FAILURE difference: N/A test id: %i test name: %s field: %s'],id,id_string,fieldname));
185 elseif strcmpi(output,'daily');
186 fid=fopen([ISSM_DIR '/dailylog/matlaberror.log'], 'at');
187 fprintf(fid,'%s',message);
188 fprintf(fid,'\n------------------------------------------------------------------\n');
189 fclose(fid);
190 disp(sprintf(['FAILURE difference: N/A test id: %i test name: %s field: %s'],id,id_string,fieldname));
191 else
192 disp(sprintf(['FAILURE difference: N/A test id: %i test name: %s field: %s'],id,id_string,fieldname));
193 rethrow(me2);
194 end
195 end
196 end
197 end
198
199 catch me,
200
201 %something went wrong, print failure message:
202 directory=strsplit(pwd,'/');
203 message=getReport(me);
204 if strcmpi(output,'nightly')
205 fid=fopen([ISSM_DIR '/nightlylog/matlaberror.log'], 'at');
206 fprintf(fid,'%s',message);
207 fprintf(fid,'\n------------------------------------------------------------------\n');
208 fclose(fid);
209 disp(sprintf(['FAILURE difference: N/A test id: %i test name: %s field: %s'],id,id_string,'N/A'));
210 elseif strcmpi(output,'daily');
211 fid=fopen([ISSM_DIR '/dailylog/matlaberror.log'], 'at');
212 fprintf(fid,'%s',message);
213 fprintf(fid,'\n------------------------------------------------------------------\n');
214 fclose(fid);
215 disp(sprintf(['FAILURE difference: N/A test id: %i test name: %s field: %s'],id,id_string,'N/A'));
216 else
217 disp(sprintf(['FAILURE difference: N/A test id: %i test name: %s field: %s'],id,id_string,'N/A'));
218 rethrow(me);
219 end
220 end
221end
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