| 1 | #include "../../c/main/issm.h"
|
|---|
| 2 | #include <cstddef>
|
|---|
| 3 | #include <stdio.h>
|
|---|
| 4 |
|
|---|
| 5 | //Android specific header includes:
|
|---|
| 6 | #include <jni.h>
|
|---|
| 7 | #include <android/log.h>
|
|---|
| 8 | #include <android/log.h>
|
|---|
| 9 |
|
|---|
| 10 | //iOS specific header includes:
|
|---|
| 11 |
|
|---|
| 12 | namespace gov_nasa_jpl_issm
|
|---|
| 13 | {
|
|---|
| 14 | /*Global variables{{{*/
|
|---|
| 15 | FemModel *fm;
|
|---|
| 16 | double* xyz; /*keep vertices information here*/
|
|---|
| 17 | /*}}}*/
|
|---|
| 18 | jint Initialize(JNIEnv *env, jclass clazz, jstring jsolution_type, jstring jabsfile, jstring jrelfile) /*{{{*/
|
|---|
| 19 | {
|
|---|
| 20 |
|
|---|
| 21 | /*arguments to constructor: */
|
|---|
| 22 | int argc; //arguments to constructor.
|
|---|
| 23 | char** argv = NULL;
|
|---|
| 24 | const char* issmname = "issm.exe";
|
|---|
| 25 | char *solution_type = NULL;
|
|---|
| 26 | char *absfile = NULL;
|
|---|
| 27 | char *relfile = NULL;
|
|---|
| 28 | ISSM_MPI_Comm comm=1;
|
|---|
| 29 |
|
|---|
| 30 | /*log:*/
|
|---|
| 31 | __android_log_print(ANDROID_LOG_INFO, "Native","Initializing FemModel");
|
|---|
| 32 |
|
|---|
| 33 | /*retrieve from java machine: */
|
|---|
| 34 | solution_type = (char*)env->GetStringUTFChars(jsolution_type,0);
|
|---|
| 35 | absfile = (char*)env->GetStringUTFChars(jabsfile,0);
|
|---|
| 36 | relfile = (char*)env->GetStringUTFChars(jrelfile,0);
|
|---|
| 37 |
|
|---|
| 38 | /*creat arguments to call constructor for FemModel: */
|
|---|
| 39 | argc=4;
|
|---|
| 40 | argv=(char**)malloc(argc*sizeof(char*));
|
|---|
| 41 | argv[0]=(char*)issmname;
|
|---|
| 42 | argv[1]=solution_type;
|
|---|
| 43 | argv[2]=absfile;
|
|---|
| 44 | argv[3]=relfile;
|
|---|
| 45 |
|
|---|
| 46 | /*call Model constructor passing in infile as File Descriptor parameter.*/
|
|---|
| 47 | fm = new FemModel(argc,argv,comm);
|
|---|
| 48 |
|
|---|
| 49 | /*we'll need the toolkits activated right away to use matrices: */
|
|---|
| 50 | ToolkitsOptionsFromAnalysis(fm->parameters,NoneAnalysisEnum);
|
|---|
| 51 |
|
|---|
| 52 | /*release strings: */
|
|---|
| 53 | env->ReleaseStringUTFChars(jsolution_type, solution_type); //must realease the char*
|
|---|
| 54 | env->ReleaseStringUTFChars(jabsfile, absfile); //must realease the char*
|
|---|
| 55 | env->ReleaseStringUTFChars(jrelfile, relfile); //must realease the char*
|
|---|
| 56 |
|
|---|
| 57 | /*figure out size of solution: */
|
|---|
| 58 | __android_log_print(ANDROID_LOG_INFO, "Native","Number of elements");
|
|---|
| 59 | jint size = (jint) fm->elements->NumberOfElements();
|
|---|
| 60 |
|
|---|
| 61 | /*retrieve vertices x,y and z coordinates: */
|
|---|
| 62 | __android_log_print(ANDROID_LOG_INFO, "Native","Retrieving vertices");
|
|---|
| 63 | xyz=fm->vertices->ToXYZ();
|
|---|
| 64 |
|
|---|
| 65 | /*log: */
|
|---|
| 66 | __android_log_print(ANDROID_LOG_INFO, "Native","Done Initializing FemModel");
|
|---|
| 67 |
|
|---|
| 68 | return size;
|
|---|
| 69 |
|
|---|
| 70 | }
|
|---|
| 71 | /*}}}*/
|
|---|
| 72 | void Solve(JNIEnv *env, jclass clazz , jdouble alpha, jobject buf){ /*{{{*/
|
|---|
| 73 |
|
|---|
| 74 | int i,count;
|
|---|
| 75 | double x1,y1,z1,vel1;
|
|---|
| 76 | double x2,y2,z2,vel2;
|
|---|
| 77 | double x3,y3,z3,vel3;
|
|---|
| 78 | int v1,v2,v3,eid;
|
|---|
| 79 | Patch* patch=NULL;
|
|---|
| 80 |
|
|---|
| 81 | /*log:*/
|
|---|
| 82 | __android_log_print(ANDROID_LOG_INFO, "Native","Solving ");
|
|---|
| 83 |
|
|---|
| 84 | /*retrieve buffer: */
|
|---|
| 85 | jdouble *dBuf = (jdouble *)env->GetDirectBufferAddress(buf);
|
|---|
| 86 |
|
|---|
| 87 | /*reset basal friction to what it was before: */
|
|---|
| 88 | __android_log_print(ANDROID_LOG_INFO, "Native","alpha %g ",alpha);
|
|---|
| 89 |
|
|---|
| 90 | __android_log_print(ANDROID_LOG_INFO, "Native","ok-1");
|
|---|
| 91 |
|
|---|
| 92 | InputDuplicatex(fm->elements,fm->nodes,fm->vertices,fm->loads,fm->materials,fm->parameters,AndroidFrictionCoefficientEnum,FrictionCoefficientEnum);
|
|---|
| 93 | __android_log_print(ANDROID_LOG_INFO, "Native","ok0");
|
|---|
| 94 |
|
|---|
| 95 | /*now scale friction by alpha: */
|
|---|
| 96 | InputScalex(fm->elements,fm->nodes,fm->vertices,fm->loads,fm->materials,fm->parameters,FrictionCoefficientEnum,alpha/100);
|
|---|
| 97 | __android_log_print(ANDROID_LOG_INFO, "Native","ok1");
|
|---|
| 98 |
|
|---|
| 99 | /*solve: */
|
|---|
| 100 | fm -> Solve();
|
|---|
| 101 | __android_log_print(ANDROID_LOG_INFO, "Native","ok2");
|
|---|
| 102 |
|
|---|
| 103 | /*retrieve results: */
|
|---|
| 104 | __android_log_print(ANDROID_LOG_INFO, "Native","Retrieving results ");
|
|---|
| 105 | //fm->elements->ProcessResultsUnits(); we are now in SI units
|
|---|
| 106 | patch=fm->elements->ResultsToPatch();
|
|---|
| 107 |
|
|---|
| 108 | /*sort out the velocities: */
|
|---|
| 109 | for(i=0;i<patch->numrows;i++){
|
|---|
| 110 | if ((patch->values[i*patch->numcols+0])==VelEnum){
|
|---|
| 111 |
|
|---|
| 112 | /*Each row of the Patch object is made of the following information:
|
|---|
| 113 | - the result enum_type,
|
|---|
| 114 | - the step and time,
|
|---|
| 115 | - the id of the element,
|
|---|
| 116 | - the interpolation type,
|
|---|
| 117 | - the vertices ids,
|
|---|
| 118 | - and the values at the nodes (could be different from the vertices)
|
|---|
| 119 | */
|
|---|
| 120 | eid=(int)patch->values[i*patch->numcols+3]-1;
|
|---|
| 121 | v1=(int)patch->values[i*patch->numcols+5];
|
|---|
| 122 | x1=xyz[3*(v1-1)+0]; y1=xyz[3*(v1-1)+1]; z1=xyz[3*(v1-1)+2];
|
|---|
| 123 |
|
|---|
| 124 | v2=(int)patch->values[i*patch->numcols+6];
|
|---|
| 125 | x2=xyz[3*(v2-1)+0]; y2=xyz[3*(v2-1)+1]; z2=xyz[3*(v2-1)+2];
|
|---|
| 126 |
|
|---|
| 127 | v3=(int)patch->values[i*patch->numcols+7];
|
|---|
| 128 | x3=xyz[3*(v3-1)+0]; y3=xyz[3*(v3-1)+1]; z3=xyz[3*(v3-1)+2];
|
|---|
| 129 |
|
|---|
| 130 | vel1=patch->values[i*patch->numcols+8];
|
|---|
| 131 | vel2=patch->values[i*patch->numcols+9];
|
|---|
| 132 | vel3=patch->values[i*patch->numcols+10];
|
|---|
| 133 |
|
|---|
| 134 | /*plug into dBuf: */
|
|---|
| 135 | /*vertex 1: */
|
|---|
| 136 | dBuf[12*eid+0]=x1;
|
|---|
| 137 | dBuf[12*eid+1]=y1;
|
|---|
| 138 | dBuf[12*eid+2]=z1;
|
|---|
| 139 |
|
|---|
| 140 | /*vertex 2: */
|
|---|
| 141 | dBuf[12*eid+3]=x2;
|
|---|
| 142 | dBuf[12*eid+4]=y2;
|
|---|
| 143 | dBuf[12*eid+5]=z2;
|
|---|
| 144 |
|
|---|
| 145 | /*vertex 3: */
|
|---|
| 146 | dBuf[12*eid+6]=x3;
|
|---|
| 147 | dBuf[12*eid+7]=y3;
|
|---|
| 148 | dBuf[12*eid+8]=z3;
|
|---|
| 149 |
|
|---|
| 150 | /*values at 3 vertices: */
|
|---|
| 151 | dBuf[12*eid+9]=vel1;
|
|---|
| 152 | dBuf[12*eid+10]=vel2;
|
|---|
| 153 | dBuf[12*eid+11]=vel3;
|
|---|
| 154 |
|
|---|
| 155 | }
|
|---|
| 156 | }
|
|---|
| 157 |
|
|---|
| 158 | /*for(i=0;i<148;i++){
|
|---|
| 159 | __android_log_print(ANDROID_LOG_INFO, "Native","%g %g %g | %g %g %g | %g %g %g | %g %g %g\n",
|
|---|
| 160 | dBuf[12*i+0],dBuf[12*i+1],dBuf[12*i+2],
|
|---|
| 161 | dBuf[12*i+3],dBuf[12*i+4],dBuf[12*i+5],
|
|---|
| 162 | dBuf[12*i+6],dBuf[12*i+7],dBuf[12*i+8],
|
|---|
| 163 | dBuf[12*i+9],dBuf[12*i+10],dBuf[12*i+11]);
|
|---|
| 164 | }*/
|
|---|
| 165 |
|
|---|
| 166 | /*delete temporary data:*/
|
|---|
| 167 | delete patch;
|
|---|
| 168 |
|
|---|
| 169 | }/*}}}*/
|
|---|
| 170 | static JNINativeMethod method_table[] = /*{{{*/
|
|---|
| 171 | {
|
|---|
| 172 | {"createISSMModel" ,"(Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;)I" , (void *) Initialize},
|
|---|
| 173 | {"solveISSMModel", "(DLjava/nio/DoubleBuffer;)V", (void *) Solve}
|
|---|
| 174 | };
|
|---|
| 175 | /*}}}*/
|
|---|
| 176 | }
|
|---|
| 177 |
|
|---|
| 178 | using namespace gov_nasa_jpl_issm;
|
|---|
| 179 | extern "C" jint JNI_OnLoad(JavaVM* vm, void* reserved) /*{{{*/
|
|---|
| 180 | {
|
|---|
| 181 | JNIEnv* env;
|
|---|
| 182 | if (vm->GetEnv(reinterpret_cast<void**>(&env), JNI_VERSION_1_6) != JNI_OK) {
|
|---|
| 183 | return -1;
|
|---|
| 184 | }
|
|---|
| 185 | else
|
|---|
| 186 | {
|
|---|
| 187 | jclass clazz = env->FindClass("gov/nasa/jpl/issm/IssmJni");
|
|---|
| 188 | if(clazz)
|
|---|
| 189 | {
|
|---|
| 190 | env->RegisterNatives(clazz, method_table, 3);
|
|---|
| 191 | env->DeleteLocalRef(clazz);
|
|---|
| 192 | return JNI_VERSION_1_6;
|
|---|
| 193 | }
|
|---|
| 194 | else return -1;
|
|---|
| 195 | }
|
|---|
| 196 | }
|
|---|
| 197 | /*}}}*/
|
|---|