source: issm/trunk/src/m/model/parseresultsfromdisk.m@ 9373

function results=parseresultsfromdisk(filename,iosplit)
%PARSERESULTSFROMDISK - ...
%
%   Usage:
%      results=parseresultsfromdisk(filename,iosplit)

if iosplit,
        results=parseresultsfromdiskiosplit(filename);
else
        results=parseresultsfromdiskioserial(filename);
end

%process patch if necessary
results=MatlabProcessPatch(results);

function results=parseresultsfromdiskioserial(filename) % {{{
%PARSERESULTSFROMDISK - ...
%
%   Usage:
%      results=parseresultsfromdiskioserial(filename)


%Open file
fid=fopen(filename,'rb');
if(fid==-1),
        error(['loadresultsfromdisk error message: could not open ',filename,' for binary reading']);
end
results=struct();

%Read fields until the end of the file.
result=ReadData(fid);
while ~isempty(result), 
        %Get time and step
        results(result.step).step=result.step;
        results(result.step).time=result.time; 

        %Add result
        if (length(results)>=result.step & isfield(results,result.fieldname) & ~strcmp(result.fieldname,'SolutionType')),
                        results(result.step).(result.fieldname)=[ results(result.step).(result.fieldname); result.field];
        else
                results(result.step).(result.fieldname)=result.field;
        end

        %read next result
        result=ReadData(fid);

end

fclose(fid);
% }}}
function results=parseresultsfromdisk(filename) % {{{
%PARSERESULTSFROMDISKIOSPLIT - ...
%
%   Usage:
%      results=parseresultsfromdiskiosplit(filename)


%Open file
fid=fopen(filename,'rb');
if(fid==-1),
        error(['loadresultsfromdisk error message: could not open ',filename,' for binary reading']);
end
results=struct();

%if we have done split I/O, ie, we have results that are fragmented across patches, 
%do a first pass, and figure out the structure of results
result=ReadDataDimensions(fid);
while ~isempty(result),

        %Get time and step
        results(result.step).step=result.step;
        results(result.step).time=result.time; 

        %Add result
        if strcmpi(result.fieldname,'Patch'),
                results(result.step).(result.fieldname)=[0 result.N];
        else
                results(result.step).(result.fieldname)=NaN;
        end

        %read next result
        result=ReadDataDimensions(fid);
end

%do a second pass, and figure out the size of the patches
fseek(fid,0,-1); %rewind
result=ReadDataDimensions(fid);
while ~isempty(result),

        %Add result
        if strcmpi(result.fieldname,'Patch'),
                patchdimensions=results(result.step).(result.fieldname);
                results(result.step).(result.fieldname)=[patchdimensions(1)+result.M result.N];
        end

        %read next result
        result=ReadDataDimensions(fid);
end

%allocate patches
for i=1:length(results),
        results(i).Patch=zeros(results(i).Patch(1),results(i).Patch(2));
        results(i).counter=1; %use to index into the patch
end

%third pass, this time to read the real information
fseek(fid,0,-1); %rewind
result=ReadData(fid);
while ~isempty(result),

        %Get time and step
        results(result.step).step=result.step;
        results(result.step).time=result.time; 

        %Add result
        if strcmpi(result.fieldname,'Patch'),
                counter=results(result.step).counter;
                counter2=counter+size(result.field,1)-1;
                results(result.step).(result.fieldname)(counter:counter2,:)=result.field;

                %increment counter: 
                results(result.step).counter=counter2+1;
        else
                results(result.step).(result.fieldname)=result.field;
        end

        %read next result
        result=ReadData(fid);

end

%close file
fclose(fid);
        % }}}
function result=ReadData(fid) % {{{
%READDATA - ...
%
%   Usage:
%      field=ReadData(fid)


%read field
[length,count]=fread(fid,1,'int');

if count==0,
        result=struct([]);
else
        fieldname=fread(fid,length,'char');
        fieldname=fieldname(1:end-1)';
        fieldname=char(fieldname);
        time=fread(fid,1,'double');
        step=fread(fid,1,'int');

        type=fread(fid,1,'int');
        M=fread(fid,1,'int');
        if type==1,
                field=fread(fid,M,'double');
        elseif type==2,
                field=fread(fid,M,'char');
                field=char(field(1:end-1)');
        elseif type==3,
                N=fread(fid,1,'int');
                field=transpose(fread(fid,[N M],'double'));
        else
                error(['cannot read data of type ' num2str(type) ]);
        end

        result.fieldname=fieldname;
        result.time=time;
        result.step=step;
        result.field=field;
end
% }}}
function result=ReadDataDimensions(fid) % {{{
%READDATA - read data dimensions, step and time, but not the data itself.
%
%   Usage:
%      field=ReadDataDimensions(fid)


%read field
[length,count]=fread(fid,1,'int');

if count==0,
        result=struct([]);
else
        fieldname=fread(fid,length,'char');
        fieldname=fieldname(1:end-1)';
        fieldname=char(fieldname);
        time=fread(fid,1,'double');
        step=fread(fid,1,'int');

        type=fread(fid,1,'int');
        M=fread(fid,1,'int');
        N=1; %default
        if type==1,
                fseek(fid,M*8,0);
        elseif type==2,
                fseek(fid,M,0);
        elseif type==3,
                N=fread(fid,1,'int');
                fseek(fid,N*M*8,0);
        else
                error(['cannot read data of type ' num2str(type) ]);
        end

        result.fieldname=fieldname;
        result.time=time;
        result.step=step;
        result.M=M;
        result.N=N;
end
% }}}