source: issm/trunk/src/m/mesh/findsegments.m@ 13395

function segments=findsegments(md,varargin)
%FINDSEGMENTS - build segments model field
%
%   Optional inputs:
%      'mesh.elementconnectivity'
%
%   Usage:
%      segments=findsegments(md,varargin);

%get options
options=pairoptions(varargin{:});

%Get connectivity
mesh.elementconnectivity=getfieldvalue(options,'mesh.elementconnectivity',md.mesh.elementconnectivity);

%Now, build the connectivity tables for this mesh if not correclty done
if size(md.mesh.elementconnectivity,1)~=md.mesh.numberofelements,
        if exist(options,'mesh.elementconnectivity'),
                error(' ''mesh.elementconnectivity'' option does not have thge right size.');
        else
                mesh.elementconnectivity=ElementConnectivity(md.mesh.elements,md.mesh.vertexconnectivity);
        end
end

%Recreate the segments
elementonboundary=double(mesh.elementconnectivity(:,3)==0);
pos=find(elementonboundary);
num_segments=length(pos);
segments=zeros(num_segments,3);
count=1;

%loop over the segments
for i=1:num_segments,

        %get current element on boundary
        el1=pos(i);

        %get elements connected to el1
        els2=mesh.elementconnectivity(el1,find(mesh.elementconnectivity(el1,:)));

        %el1 is connected to 2 other elements
        if length(els2)>1,

                %get nodes of el1
                nods1=md.mesh.elements(el1,:);

                %find the common vertices to the two elements connected to el1 (1 or 2)
                flag=intersect(md.mesh.elements(els2(1),:),md.mesh.elements(els2(2),:));

                %get the vertices on the boundary and build segment
                nods1(find(ismember(nods1,flag)))=[];
                segments(count,:)=[nods1 el1];

                %swap segment nodes if necessary
                ord1=find(nods1(1)==md.mesh.elements(el1,:));
                ord2=find(nods1(2)==md.mesh.elements(el1,:));
                if ( (ord1==1 & ord2==2) | (ord1==2 & ord2==3) | (ord1==3 & ord2==1) ),
                        temp=segments(count,1);
                        segments(count,1)=segments(count,2);
                        segments(count,2)=temp;
                end
                segments(count,1:2)=fliplr(segments(count,1:2));
                count=count+1;

        %el1 is connected to only one element
        else
                %get nodes of el1
                nods1=md.mesh.elements(el1,:);

                %find the vertex  the el1 to not share with els2
                flag=setdiff(nods1,md.mesh.elements(els2,:));

                for j=1:3,
                        nods=nods1; nods(j)=[];
                        if any(ismember(flag,nods)),

                                segments(count,:)=[nods el1];

                                %swap segment nodes if necessary
                                ord1=find(nods(1)==md.mesh.elements(el1,:));
                                ord2=find(nods(2)==md.mesh.elements(el1,:));
                                if ( (ord1==1 & ord2==2) | (ord1==2 & ord2==3) | (ord1==3 & ord2==1) ),
                                        temp=segments(count,1);
                                        segments(count,1)=segments(count,2);
                                        segments(count,2)=temp;
                                end
                                segments(count,1:2)=fliplr(segments(count,1:2));
                                count=count+1;
                        end
                end
        end
end