source: issm/trunk/src/m/clusters/eric-mac.m@ 5980

%ERIC-MAC class definition
%
%   Usage:
%          cluster=eric-mac();
%
classdef ericmac
    properties (SetAccess=public) 
                 % {{{1
                 name='eric-mac'
                 login='larour';
                 np=3;
                 port=0;
                 codepath=[issmdir() '/bin'];
                 executionpath=[issmdir() '/../execution'];
                 valgrind=[issmdir() '/externalpackages/valgrind/install/bin/valgrind'];
                 valgrindlib=[issmdir() '/externalpackages/valgrind/install/lib/libmpidebug.so'];
                 valgrindsup=[issmdir() '/externalpackages/valgrind/issm.supp'];
                 %}}}
    end
    methods
                 function cluster=ericmac(varargin) % {{{1
                         options=pairoptions(varargin{:});
                         for i=1:size(options.list,1),
                                 fieldname=options.list{i,1};
                                 fieldvalue=options.list{i,2};
                                 if ismember(fieldname,properties(ericmac)),
                                         cluster.(fieldname)=fieldvalue;
                                 else
                                         disp(['''' fieldname ''' is not a property of cluster ericmac']);
                                 end
                         end
                 end
                 %}}}
                 function disp(cluster) % {{{1
                         %  display the object
                         disp(sprintf('class ''%s'' object ''%s'' = ',class(cluster),inputname(1)));
                         disp(sprintf('    name: %s',cluster.name));
                         disp(sprintf('    login: %s',cluster.login));
                         disp(sprintf('    np: %i',cluster.np));
                         disp(sprintf('    port: %i',cluster.port));
                         disp(sprintf('    codepath: %s',cluster.codepath));
                         disp(sprintf('    executionpath: %s',cluster.executionpath));
                         disp(sprintf('    valgrind: %s',cluster.valgrind));
                         disp(sprintf('    valgrindlib: %s',cluster.valgrindlib));
                         disp(sprintf('    valgrindsup: %s',cluster.valgrindsup));
                 end
                 %}}}
                 function IsConsistent(cluster) % {{{1
                         if cluster.np>4,
                                 error('IsConsistent error message: number of processors should be lest than 16!');
                         end
                         if isnan(cluster.np),
                                 error('IsConsistent error message: number of processors should not be NaN!');
                         end
                 end
                 %}}}
                 function BuildQueueScript(cluster,modelname,analysis_type,mem_debug) % {{{1

                         %open file for writing: 
                         fid=fopen([modelname '.queue'],'w');

                         %write instructions for launching a job on the cluster
                         fprintf(fid,'#!/bin/sh\n');
                         if mem_debug==0,
                                 fprintf(fid,'mpirun -np %i %s/issm.exe %s %s %s.bin %s.petsc %s.outbin %s.lock  2> %s.errlog >%s.outlog & ',cluster.np,cluster.codepath,EnumToString(analysis_type),cluster.executionpath,modelname,modelname,modelname,modelname,modelname,modelname);
                         else
                                 %fprintf(fid,'LD_PRELOAD=%s mpirun -np %i %s --leak-check=full --gen-suppressions=all --suppressions=%s %s/issm.exe %s %s %s.bin %s.petsc %s.outbin %s.lock  2> %s.errlog >%s.outlog & ',cluster.valgrindlib,cluster.np,cluster.valgrind,cluster.valgrindsup,cluster.codepath,EnumToString(analysis_type),cluster.executionpath,modelname,modelname,modelname,modelname,modelname,modelname);
                                 fprintf(fid,'LD_PRELOAD=%s mpirun -np %i %s --leak-check=full --suppressions=%s %s/issm.exe %s %s %s.bin %s.petsc %s.outbin %s.lock  2> %s.errlog >%s.outlog & ',cluster.valgrindlib,cluster.np,cluster.valgrind,cluster.valgrindsup, cluster.codepath,EnumToString(analysis_type),cluster.executionpath,modelname,modelname,modelname,modelname,modelname,modelname);
                         end

                         %close file
                         fclose(fid);

                 end
                 %}}}
                 function command=LaunchCommand(cluster,modelruntimename,modelname)% {{{1
                         command=['cd ' cluster.executionpath ' && rm -rf ./' modelruntimename ' && mkdir ' modelruntimename ' && cd ' modelruntimename ' && mv ../' modelruntimename '.tar.gz ./ && tar -zxf ' modelruntimename '.tar.gz  && source  ' modelname '.queue '];
                 end
                 %}}}
        end
end