import numpy as np from fielddisplay import fielddisplay from checkfield import checkfield import MatlabFuncs as m from WriteData import WriteData class mesh2dvertical(object): """ MESH2DVERTICAL class definition Usage: mesh2dvertical = mesh2dvertical() """ def __init__(self): # {{{ self.x = float('NaN') self.y = float('NaN') self.elements = float('NaN') self.numberofelements = 0 self.numberofvertices = 0 self.numberofedges = 0 self.lat = float('NaN') self.long = float('NaN') self.epsg = float('NaN') self.scale_factor = float('NaN') self.vertexonboundary = float('NaN') self.vertexonbase = float('NaN') self.vertexonsurface = float('NaN') self.edges = float('NaN') self.segments = float('NaN') self.segmentmarkers = float('NaN') self.vertexconnectivity = float('NaN') self.elementconnectivity = float('NaN') self.average_vertex_connectivity = 0 #set defaults self.setdefaultparameters() # }}} def __repr__(self): # {{{ string = " 2D tria Mesh (vertical):" string = "%s\n%s" % (string, "\n Elements and vertices:") string = "%s\n%s" % (string, fielddisplay(self, "numberofelements", "number of elements")) string = "%s\n%s" % (string, fielddisplay(self, "numberofvertices", "number of vertices")) string = "%s\n%s" % (string, fielddisplay(self, "elements", "vertex indices of the mesh elements")) string = "%s\n%s" % (string, fielddisplay(self, "x", "vertices x coordinate [m]")) string = "%s\n%s" % (string, fielddisplay(self, "y", "vertices y coordinate [m]")) string = "%s\n%s" % (string, fielddisplay(self, "edges", "edges of the 2d mesh (vertex1 vertex2 element1 element2)")) string = "%s\n%s" % (string, fielddisplay(self, "numberofedges", "number of edges of the 2d mesh")) string = "%s%s" % (string, "\n\n Properties:") string = "%s\n%s" % (string, fielddisplay(self, "vertexonboundary", "vertices on the boundary of the domain flag list")) string = "%s\n%s" % (string, fielddisplay(self, 'vertexonbase', 'vertices on the bed of the domain flag list')) string = "%s\n%s" % (string, fielddisplay(self, 'vertexonsurface', 'vertices on the surface of the domain flag list')) string = "%s\n%s" % (string, fielddisplay(self, "segments", "edges on domain boundary (vertex1 vertex2 element)")) string = "%s\n%s" % (string, fielddisplay(self, "segmentmarkers", "number associated to each segment")) string = "%s\n%s" % (string, fielddisplay(self, "vertexconnectivity", "list of elements connected to vertex_i")) string = "%s\n%s" % (string, fielddisplay(self, "elementconnectivity", "list of elements adjacent to element_i")) string = "%s\n%s" % (string, fielddisplay(self, "average_vertex_connectivity", "average number of vertices connected to one vertex")) string = "%s%s" % (string, "\n\n Projection:") string = "%s\n%s" % (string, fielddisplay(self, "lat", "vertices latitude [degrees]")) string = "%s\n%s" % (string, fielddisplay(self, "long", "vertices longitude [degrees]")) string = "%s\n%s" % (string, fielddisplay(self, "epsg", "EPSG code (ex: 3413 for UPS Greenland, 3031 for UPS Antarctica)")) string = "%s\n%s" % (string, fielddisplay(self, "scale_factor", "Projection correction for volume, area, etc. computation")) return string # }}} def setdefaultparameters(self): # {{{ #the connectivity is the averaged number of nodes linked to a #given node through an edge. This connectivity is used to initially #allocate memory to the stiffness matrix. A value of 16 seems to #give a good memory / time ration. This value can be checked in #trunk / test / Miscellaneous / runme.m self.average_vertex_connectivity = 25. return self # }}} def checkconsistency(self, md, solution, analyses): # {{{ if(solution == 'LoveSolution'): return md = checkfield(md, 'fieldname', 'mesh.x', 'NaN', 1, 'Inf', 1, 'size', [md.mesh.numberofvertices]) md = checkfield(md, 'fieldname', 'mesh.y', 'NaN', 1, 'Inf', 1, 'size', [md.mesh.numberofvertices]) md = checkfield(md, 'fieldname', 'mesh.elements', 'NaN', 1, 'Inf', 1, '>', 0, 'values', np.arange(1, md.mesh.numberofvertices + 1)) md = checkfield(md, 'fieldname', 'mesh.elements', 'size', [md.mesh.numberofelements, 3]) if np.any(np.logical_not(m.ismember(np.arange(1, md.mesh.numberofvertices + 1), md.mesh.elements))): md.checkmessage("orphan nodes have been found. Check the mesh outline") md = checkfield(md, 'fieldname', 'mesh.numberofelements', '>', 0) md = checkfield(md, 'fieldname', 'mesh.numberofvertices', '>', 0) md = checkfield(md, 'fieldname', 'mesh.vertexonbase', 'size', [md.mesh.numberofvertices], 'values', [0, 1]) md = checkfield(md, 'fieldname', 'mesh.vertexonsurface', 'size', [md.mesh.numberofvertices], 'values', [0, 1]) md = checkfield(md, 'fieldname', 'mesh.average_vertex_connectivity', '>=', 9, 'message', "'mesh.average_vertex_connectivity' should be at least 9 in 2d") if(np.size(self.scale_factor) > 1): md = checkfield(md, 'fieldname', 'mesh.scale_factor', 'NaN', 1, 'Inf', 1, 'size', [md.mesh.numberofvertices]) if solution == 'ThermalSolution': md.checkmessage("thermal not supported for 2d mesh") return md # }}} def domaintype(self): # {{{ return "2Dvertical" # }}} def dimension(self): # {{{ return 2 # }}} def elementtype(self): # {{{ return "Tria" # }}} def vertexflags(self, value): # {{{ flags = np.zeros((self.numberofvertices, )) pos = self.segments[np.where(self.segmentmarkers == value), 0:2] - 1 flags[pos] = 1 return flags # }}} def marshall(self, prefix, md, fid): # {{{ WriteData(fid, prefix, 'name', 'md.mesh.domain_type', 'data', "Domain" + self.domaintype(), 'format', 'String') WriteData(fid, prefix, 'name', 'md.mesh.domain_dimension', 'data', self.dimension(), 'format', 'Integer') WriteData(fid, prefix, 'name', 'md.mesh.elementtype', 'data', self.elementtype(), 'format', 'String') WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'x', 'format', 'DoubleMat', 'mattype', 1) WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'y', 'format', 'DoubleMat', 'mattype', 1) WriteData(fid, prefix, 'name', 'md.mesh.z', 'data', np.zeros(self.numberofvertices), 'format', 'DoubleMat', 'mattype', 1) WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'elements', 'format', 'DoubleMat', 'mattype', 2) WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'numberofelements', 'format', 'Integer') WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'numberofvertices', 'format', 'Integer') WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'vertexonbase', 'format', 'BooleanMat', 'mattype', 1) WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'vertexonsurface', 'format', 'BooleanMat', 'mattype', 1) WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'average_vertex_connectivity', 'format', 'Integer') WriteData(fid, prefix, 'object', self, 'class', 'mesh', 'fieldname', 'scale_factor', 'format', 'DoubleMat', 'mattype', 1) # }}}