1 | /*\file matlabio.h
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2 | *\brief: I/O for ISSM in matlab mode
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3 | */
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4 |
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5 | #ifndef _MATLAB_IO_H_
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6 | #define _MATLAB_IO_H_
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7 |
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8 | #ifdef HAVE_CONFIG_H
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9 | #include <config.h>
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10 | #else
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11 | #error "Cannot compile with HAVE_CONFIG_H symbol! run configure first!"
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12 | #endif
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13 |
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14 | #include "../../objects/objects.h"
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15 | #include "../../Container/Container.h"
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16 | #include "../../include/include.h"
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17 |
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18 | #include <mex.h>
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19 |
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20 | void WriteData(mxArray** pdataref,Matrix* matrix);
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21 | void WriteData(mxArray** pdataref,double* matrix, int M,int N);
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22 | void WriteData(mxArray** pdataref,int* matrix, int M,int N);
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23 | void WriteData(mxArray** pdataref,Vector* vector);
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24 | void WriteData(mxArray** pdataref,double* vector, int M);
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25 | void WriteData(mxArray** pdataref,int integer);
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26 | void WriteData(mxArray** pdataref,bool boolean);
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27 | void WriteData(mxArray** pdataref,double scalar);
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28 | void WriteData(mxArray** pdataref,char* string);
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29 | void WriteData(mxArray** pdataref,BamgGeom* bamggeom);
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30 | void WriteData(mxArray** pdataref,BamgMesh* bamgmesh);
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31 |
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32 | void FetchData(double** pmatrix,int* pM,int *pN,const mxArray* dataref);
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33 | void FetchData(double** pmatrix,int* pnumel,int* pndims,int** psize,const mxArray* dataref);
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34 | void FetchData(int** pmatrix,int* pM,int *pN,const mxArray* dataref);
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35 | void FetchData(bool** pmatrix,int* pM,int *pN,const mxArray* dataref);
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36 | void FetchData(bool** pmatrix,int* pnumel,int* pndims,int** psize,const mxArray* dataref);
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37 | void FetchData(Matrix** pmatrix,const mxArray* dataref);
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38 | void FetchData(int** pvector,int* pM,const mxArray* dataref);
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39 | void FetchData(float** pvector,int* pM,const mxArray* dataref);
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40 | void FetchData(double** pvector,int* pM,const mxArray* dataref);
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41 | void FetchData(bool** pvector,int* pM,const mxArray* dataref);
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42 | void FetchData(Vector** pvector,const mxArray* dataref);
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43 | void FetchData(char** pstring,const mxArray* dataref);
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44 | void FetchData(char** pmatrix,int* pnumel,int* pndims,int** psize,const mxArray* dataref);
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45 | void FetchData(double* pscalar,const mxArray* dataref);
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46 | void FetchData(int* pinteger,const mxArray* dataref);
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47 | void FetchData(bool* pbool,const mxArray* dataref);
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48 | void FetchData(BamgGeom** bamggeom,const mxArray* dataref);
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49 | void FetchData(BamgMesh** bamgmesh,const mxArray* dataref);
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50 | void FetchData(BamgOpts** bamgopts,const mxArray* dataref);
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51 | void FetchData(Options** poptions,int istart, int nrhs,const mxArray** pdataref);
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52 |
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53 | Option* OptionParse(char* name, const mxArray* prhs[]);
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54 | OptionDouble* OptionDoubleParse( char* name, const mxArray* prhs[]);
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55 | OptionLogical* OptionLogicalParse( char* name, const mxArray* prhs[]);
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56 | OptionChar* OptionCharParse( char* name, const mxArray* prhs[]);
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57 | OptionStruct* OptionStructParse( char* name, const mxArray* prhs[]);
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58 | OptionCell* OptionCellParse( char* name, const mxArray* prhs[]);
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59 |
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60 | mxArray* mxGetAssignedField(const mxArray* pmxa_array,int number, const char* field);
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61 | void SetStructureField(mxArray* dataref,const char* fieldname,int fieldrows,int fieldcols,double* fieldpointer);
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62 | int CheckNumMatlabArguments(int nlhs,int NLHS, int nrhs,int NRHS, const char* THISFUNCTION, void (*function)( void ));
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63 |
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64 | /*Matlab to Matrix routines: */
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65 | Matrix* MatlabMatrixToMatrix(const mxArray* mxmatrix);
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66 | Vector* MatlabVectorToVector(const mxArray* mxvector);
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67 |
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68 | /*Matlab to double* routines: */
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69 | int MatlabVectorToDoubleVector(double** pvector,int* pvector_rows,const mxArray* mxvector);
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70 | int MatlabMatrixToDoubleMatrix(double** pmatrix,int* pmatrix_rows,int* pmatrix_cols,const mxArray* mxmatrix);
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71 | int MatlabNArrayToNArray(double** pmatrix,int* pmatrix_numel,int* pmatrix_ndims,int** pmatrix_size,const mxArray* mxmatrix);
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72 | int MatlabNArrayToNArray(bool** pmatrix,int* pmatrix_numel,int* pmatrix_ndims,int** pmatrix_size,const mxArray* mxmatrix);
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73 | int MatlabNArrayToNArray(char** pmatrix,int* pmatrix_numel,int* pmatrix_ndims,int** pmatrix_size,const mxArray* mxmatrix);
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74 |
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75 | /*Matlab to SeqMat routines: */
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76 | SeqMat* MatlabMatrixToSeqMat(const mxArray* dataref);
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77 | SeqVec* MatlabVectorToSeqVec(const mxArray* dataref);
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78 |
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79 | /*Matlab to Petsc routines: */
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80 | #ifdef _HAVE_PETSC_
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81 | int MatlabMatrixToPetscMatrix(Mat* matrix,int* prows,int* pcols, const mxArray* mxmatrix);
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82 | int MatlabVectorToPetscVector(Vec* pvector,int* pvector_rows,const mxArray* mxvector);
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83 | #endif
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84 |
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85 |
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86 | #endif /* _IO_H_ */
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