source: issm/trunk/src/c/matlab/io/matlabio.h@ 12330

Last change on this file since 12330 was 12330, checked in by Mathieu Morlighem, 13 years ago

merged trunk-jpl and trunk for revision 12326M
File size: 4.1 KB
Line 
1/*\file matlabio.h
2 *\brief: I/O for ISSM in matlab mode
3 */
4
5#ifndef _MATLAB_IO_H_
6#define _MATLAB_IO_H_
7
8#ifdef HAVE_CONFIG_H
9#include <config.h>
10#else
11#error "Cannot compile with HAVE_CONFIG_H symbol! run configure first!"
12#endif
13
14#include "../../objects/objects.h"
15#include "../../Container/Container.h"
16#include "../../include/include.h"
17
18#include <mex.h>
19
20void WriteData(mxArray** pdataref,Matrix* matrix);
21void WriteData(mxArray** pdataref,double* matrix, int M,int N);
22void WriteData(mxArray** pdataref,int* matrix, int M,int N);
23void WriteData(mxArray** pdataref,Vector* vector);
24void WriteData(mxArray** pdataref,double* vector, int M);
25void WriteData(mxArray** pdataref,int integer);
26void WriteData(mxArray** pdataref,bool boolean);
27void WriteData(mxArray** pdataref,double scalar);
28void WriteData(mxArray** pdataref,char* string);
29void WriteData(mxArray** pdataref,BamgGeom* bamggeom);
30void WriteData(mxArray** pdataref,BamgMesh* bamgmesh);
31
32void FetchData(double** pmatrix,int* pM,int *pN,const mxArray* dataref);
33void FetchData(double** pmatrix,int* pnumel,int* pndims,int** psize,const mxArray* dataref);
34void FetchData(int** pmatrix,int* pM,int *pN,const mxArray* dataref);
35void FetchData(bool** pmatrix,int* pM,int *pN,const mxArray* dataref);
36void FetchData(bool** pmatrix,int* pnumel,int* pndims,int** psize,const mxArray* dataref);
37void FetchData(Matrix** pmatrix,const mxArray* dataref);
38void FetchData(int** pvector,int* pM,const mxArray* dataref);
39void FetchData(float** pvector,int* pM,const mxArray* dataref);
40void FetchData(double** pvector,int* pM,const mxArray* dataref);
41void FetchData(bool** pvector,int* pM,const mxArray* dataref);
42void FetchData(Vector** pvector,const mxArray* dataref);
43void FetchData(char** pstring,const mxArray* dataref);
44void FetchData(char** pmatrix,int* pnumel,int* pndims,int** psize,const mxArray* dataref);
45void FetchData(double* pscalar,const mxArray* dataref);
46void FetchData(int* pinteger,const mxArray* dataref);
47void FetchData(bool* pbool,const mxArray* dataref);
48void FetchData(BamgGeom** bamggeom,const mxArray* dataref);
49void FetchData(BamgMesh** bamgmesh,const mxArray* dataref);
50void FetchData(BamgOpts** bamgopts,const mxArray* dataref);
51void FetchData(Options** poptions,int istart, int nrhs,const mxArray** pdataref);
52
53Option* OptionParse(char* name, const mxArray* prhs[]);
54OptionDouble* OptionDoubleParse( char* name, const mxArray* prhs[]);
55OptionLogical* OptionLogicalParse( char* name, const mxArray* prhs[]);
56OptionChar* OptionCharParse( char* name, const mxArray* prhs[]);
57OptionStruct* OptionStructParse( char* name, const mxArray* prhs[]);
58OptionCell* OptionCellParse( char* name, const mxArray* prhs[]);
59
60mxArray* mxGetAssignedField(const mxArray* pmxa_array,int number, const char* field);
61void SetStructureField(mxArray* dataref,const char* fieldname,int fieldrows,int fieldcols,double* fieldpointer);
62int CheckNumMatlabArguments(int nlhs,int NLHS, int nrhs,int NRHS, const char* THISFUNCTION, void (*function)( void ));
63
64/*Matlab to Matrix routines: */
65Matrix* MatlabMatrixToMatrix(const mxArray* mxmatrix);
66Vector* MatlabVectorToVector(const mxArray* mxvector);
67
68/*Matlab to double* routines: */
69int MatlabVectorToDoubleVector(double** pvector,int* pvector_rows,const mxArray* mxvector);
70int MatlabMatrixToDoubleMatrix(double** pmatrix,int* pmatrix_rows,int* pmatrix_cols,const mxArray* mxmatrix);
71int MatlabNArrayToNArray(double** pmatrix,int* pmatrix_numel,int* pmatrix_ndims,int** pmatrix_size,const mxArray* mxmatrix);
72int MatlabNArrayToNArray(bool** pmatrix,int* pmatrix_numel,int* pmatrix_ndims,int** pmatrix_size,const mxArray* mxmatrix);
73int MatlabNArrayToNArray(char** pmatrix,int* pmatrix_numel,int* pmatrix_ndims,int** pmatrix_size,const mxArray* mxmatrix);
74
75/*Matlab to SeqMat routines: */
76SeqMat* MatlabMatrixToSeqMat(const mxArray* dataref);
77SeqVec* MatlabVectorToSeqVec(const mxArray* dataref);
78
79/*Matlab to Petsc routines: */
80#ifdef _HAVE_PETSC_
81int MatlabMatrixToPetscMatrix(Mat* matrix,int* prows,int* pcols, const mxArray* mxmatrix);
82int MatlabVectorToPetscVector(Vec* pvector,int* pvector_rows,const mxArray* mxvector);
83#endif
84
85
86#endif /* _IO_H_ */
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